BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00014410
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POE96986.1| putative ribonuclease h protein [Quercus suber]         47   6e-06

>gb|POE96986.1| putative ribonuclease h protein [Quercus suber]
          Length = 177

 Score = 46.6 bits (109), Expect(2) = 6e-06
 Identities = 21/45 (46%), Positives = 29/45 (64%)
 Frame = +2

Query: 434 PSKGGAASVLRDSNGTWIAGTSRNLVGVSVAVTEFLAIRDGLSLA 568
           PSK GA  ++RDS+G W+ G  R++   +    EF A+RDGL LA
Sbjct: 65  PSKAGAGGLIRDSSGHWVKGFVRSIGFATSVTAEFWALRDGLKLA 109



 Score = 31.2 bits (69), Expect(2) = 6e-06
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 373 PPQGWIKINSDGKLGDCCSRSLKGG 447
           PP+GW K+N+DG  G   S++  GG
Sbjct: 48  PPEGWFKLNTDGASGGNPSKAGAGG 72