BLASTX nr result

ID: Acanthopanax23_contig00013968 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00013968
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017254601.1| PREDICTED: probable E3 ubiquitin-protein lig...    96   2e-21
ref|XP_017254600.1| PREDICTED: probable E3 ubiquitin-protein lig...    96   4e-21
ref|XP_013469878.1| C6HC-type zinc finger RING/U-box protein [Me...    80   3e-16
gb|PIN02047.1| Ubiquitin--protein ligase [Handroanthus impetigin...    82   4e-16
ref|XP_009365261.1| PREDICTED: ATP-dependent RNA helicase DEAH12...    82   1e-15
ref|XP_009365260.1| PREDICTED: ATP-dependent RNA helicase DEAH12...    82   2e-15
ref|XP_009365258.1| PREDICTED: E3 ubiquitin-protein ligase ARIH2...    82   2e-15
emb|CBI25234.3| unnamed protein product, partial [Vitis vinifera]      80   3e-15
gb|PNX98112.1| putative E3 ubiquitin-protein ligase RNF144A-like...    80   4e-15
emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]    81   5e-15
dbj|GAU14896.1| hypothetical protein TSUD_46890 [Trifolium subte...    79   6e-15
ref|XP_002270721.3| PREDICTED: uncharacterized protein LOC100251...    80   7e-15
dbj|GAU14899.1| hypothetical protein TSUD_46920 [Trifolium subte...    79   1e-14
ref|XP_009365256.1| PREDICTED: uncharacterized protein LOC103955...    80   1e-14
ref|XP_008381172.1| PREDICTED: uncharacterized protein LOC103444...    80   1e-14
ref|XP_009365255.1| PREDICTED: uncharacterized protein LOC103955...    80   1e-14
ref|XP_013469879.1| zinc finger protein [Medicago truncatula] >g...    79   1e-14
ref|XP_004496771.1| PREDICTED: probable E3 ubiquitin-protein lig...    78   3e-14
gb|EYU36419.1| hypothetical protein MIMGU_mgv1a027008mg, partial...    77   3e-14
ref|XP_024182095.1| E3 ubiquitin-protein ligase ARIH2-like [Rosa...    78   3e-14

>ref|XP_017254601.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF217 isoform X2
           [Daucus carota subsp. sativus]
          Length = 274

 Score = 96.3 bits (238), Expect = 2e-21
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           +GKKK G+DL+VEK+A            FYVEK+QGC H+TCRC+YEFCYRCGSKWSSKH
Sbjct: 207 SGKKKRGIDLMVEKIAKKNNWRKCPSCKFYVEKSQGCSHMTCRCSYEFCYRCGSKWSSKH 266

Query: 181 GSC 189
            +C
Sbjct: 267 AAC 269


>ref|XP_017254600.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF217 isoform X1
           [Daucus carota subsp. sativus]
 gb|KZM92600.1| hypothetical protein DCAR_020035 [Daucus carota subsp. sativus]
          Length = 312

 Score = 96.3 bits (238), Expect = 4e-21
 Identities = 40/63 (63%), Positives = 48/63 (76%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           +GKKK G+DL+VEK+A            FYVEK+QGC H+TCRC+YEFCYRCGSKWSSKH
Sbjct: 245 SGKKKRGIDLMVEKIAKKNNWRKCPSCKFYVEKSQGCSHMTCRCSYEFCYRCGSKWSSKH 304

Query: 181 GSC 189
            +C
Sbjct: 305 AAC 307


>ref|XP_013469878.1| C6HC-type zinc finger RING/U-box protein [Medicago truncatula]
 gb|KEH43916.1| C6HC-type zinc finger RING/U-box protein [Medicago truncatula]
          Length = 146

 Score = 79.7 bits (195), Expect = 3e-16
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DLLV +LA            FYVEK +GCLHITCRC +EFCY CG +W+S H
Sbjct: 81  NADERGREDLLVRELANEKKWRRCPTCKFYVEKTEGCLHITCRCRFEFCYACGEQWTSTH 140

Query: 181 GSC 189
           G C
Sbjct: 141 GGC 143


>gb|PIN02047.1| Ubiquitin--protein ligase [Handroanthus impetiginosus]
          Length = 256

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 35/65 (53%), Positives = 41/65 (63%)
 Frame = +1

Query: 7   KKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKHGS 186
           +K G  D +V+ LA             YVEK +GCLHITCRC YEFCYRCGSKWS  HGS
Sbjct: 192 RKGGNDDKIVKTLAKKKNWQKCPKCKMYVEKTEGCLHITCRCKYEFCYRCGSKWSDSHGS 251

Query: 187 CSAKN 201
           C  ++
Sbjct: 252 CRQRS 256


>ref|XP_009365261.1| PREDICTED: ATP-dependent RNA helicase DEAH12, chloroplastic-like
           isoform X3 [Pyrus x bretschneideri]
          Length = 316

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            +YVEK QGCLHITCRC Y FCYRCG++W+S H
Sbjct: 253 NESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHITCRCQYHFCYRCGAEWTSTH 312

Query: 181 GSC 189
           G C
Sbjct: 313 GGC 315


>ref|XP_009365260.1| PREDICTED: ATP-dependent RNA helicase DEAH12, chloroplastic-like
           isoform X2 [Pyrus x bretschneideri]
          Length = 373

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            +YVEK QGCLHITCRC Y FCYRCG++W+S H
Sbjct: 310 NESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHITCRCQYHFCYRCGAEWTSTH 369

Query: 181 GSC 189
           G C
Sbjct: 370 GGC 372


>ref|XP_009365258.1| PREDICTED: E3 ubiquitin-protein ligase ARIH2-like isoform X1 [Pyrus
           x bretschneideri]
 ref|XP_009365259.1| PREDICTED: E3 ubiquitin-protein ligase ARIH2-like isoform X1 [Pyrus
           x bretschneideri]
          Length = 377

 Score = 81.6 bits (200), Expect = 2e-15
 Identities = 33/63 (52%), Positives = 41/63 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            +YVEK QGCLHITCRC Y FCYRCG++W+S H
Sbjct: 314 NESERGRADLMVRELAKQKKWKRCPRCKYYVEKTQGCLHITCRCQYHFCYRCGAEWTSTH 373

Query: 181 GSC 189
           G C
Sbjct: 374 GGC 376


>emb|CBI25234.3| unnamed protein product, partial [Vitis vinifera]
          Length = 315

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  D+L++KLA            FYVEK +GC+H+TCRC +EFCYRCG KWS  H
Sbjct: 249 NADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNH 308

Query: 181 GSC 189
           G+C
Sbjct: 309 GTC 311


>gb|PNX98112.1| putative E3 ubiquitin-protein ligase RNF144A-like protein
           [Trifolium pratense]
          Length = 294

 Score = 79.7 bits (195), Expect = 4e-15
 Identities = 34/63 (53%), Positives = 40/63 (63%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            FYVEKN GCLHITCRC +EFCY CG +WSS H
Sbjct: 229 NVDERGSDDLVVRELANQKQWRRCPTCKFYVEKNGGCLHITCRCRFEFCYACGEQWSSTH 288

Query: 181 GSC 189
           G C
Sbjct: 289 GGC 291


>emb|CAN64393.1| hypothetical protein VITISV_024826 [Vitis vinifera]
          Length = 793

 Score = 80.9 bits (198), Expect = 5e-15
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  D+L++KLA            FYVEK +GC+H+TCRC +EFCYRCG KWS  H
Sbjct: 727 NADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNH 786

Query: 181 GSCSAK 198
           G+C  +
Sbjct: 787 GTCQLR 792


>dbj|GAU14896.1| hypothetical protein TSUD_46890 [Trifolium subterraneum]
          Length = 292

 Score = 79.3 bits (194), Expect = 6e-15
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            FYVEKN GCLH+TCRC +EFCY CG +WSS H
Sbjct: 227 NVDERGSDDLVVRELANEKKWRRCPTCKFYVEKNGGCLHVTCRCRFEFCYACGEQWSSTH 286

Query: 181 GSC 189
           G C
Sbjct: 287 GGC 289


>ref|XP_002270721.3| PREDICTED: uncharacterized protein LOC100251833 [Vitis vinifera]
          Length = 549

 Score = 80.5 bits (197), Expect = 7e-15
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  D+L++KLA            FYVEK +GC+H+TCRC +EFCYRCG KWS  H
Sbjct: 483 NADERGREDMLLKKLAEEKKWKRCPQCKFYVEKIEGCVHLTCRCGFEFCYRCGGKWSVNH 542

Query: 181 GSC 189
           G+C
Sbjct: 543 GTC 545


>dbj|GAU14899.1| hypothetical protein TSUD_46920 [Trifolium subterraneum]
          Length = 348

 Score = 79.3 bits (194), Expect = 1e-14
 Identities = 34/61 (55%), Positives = 40/61 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DLLV +LA            FYVEKN+GCLHITCRC +EFCY CG +WSS H
Sbjct: 206 NVDERGSEDLLVRELANQKQWRRCPKCKFYVEKNEGCLHITCRCRFEFCYACGEQWSSTH 265

Query: 181 G 183
           G
Sbjct: 266 G 266


>ref|XP_009365256.1| PREDICTED: uncharacterized protein LOC103955106 isoform X2 [Pyrus x
           bretschneideri]
          Length = 644

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V++LA            +YVEK QGCLHITCRC Y+FCY CG++W+S H
Sbjct: 581 NEDERGRADLMVKELAKQNKWKRCPRCKYYVEKTQGCLHITCRCQYQFCYGCGAEWTSTH 640

Query: 181 GSC 189
           G C
Sbjct: 641 GGC 643


>ref|XP_008381172.1| PREDICTED: uncharacterized protein LOC103444043 isoform X1 [Malus
           domestica]
          Length = 644

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V++LA            +YVEK QGCLHITCRC Y+FCY CG++W+S H
Sbjct: 581 NEDERGRADLMVKELAKQKKWKRCPRCKYYVEKTQGCLHITCRCQYQFCYGCGAEWTSTH 640

Query: 181 GSC 189
           G C
Sbjct: 641 GGC 643


>ref|XP_009365255.1| PREDICTED: uncharacterized protein LOC103955106 isoform X1 [Pyrus x
           bretschneideri]
          Length = 646

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 32/63 (50%), Positives = 42/63 (66%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V++LA            +YVEK QGCLHITCRC Y+FCY CG++W+S H
Sbjct: 583 NEDERGRADLMVKELAKQNKWKRCPRCKYYVEKTQGCLHITCRCQYQFCYGCGAEWTSTH 642

Query: 181 GSC 189
           G C
Sbjct: 643 GGC 645


>ref|XP_013469879.1| zinc finger protein [Medicago truncatula]
 gb|KEH43917.1| zinc finger protein [Medicago truncatula]
          Length = 307

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DLLV +LA            FYVEK  GCLHITCRC +EFCY CG++W+S H
Sbjct: 242 NVDERGREDLLVRELANKKKWKRCPRCRFYVEKRDGCLHITCRCKFEFCYSCGAQWTSSH 301

Query: 181 GSC 189
           G C
Sbjct: 302 GGC 304


>ref|XP_004496771.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A [Cicer
           arietinum]
          Length = 350

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 33/63 (52%), Positives = 40/63 (63%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DLLV +LA            FY+EK +GCLHITCRC +EFCY CG KW+S H
Sbjct: 285 NVDERGIQDLLVRELANQKKWKRCPKCKFYIEKFEGCLHITCRCRFEFCYACGEKWTSNH 344

Query: 181 GSC 189
           G C
Sbjct: 345 GGC 347


>gb|EYU36419.1| hypothetical protein MIMGU_mgv1a027008mg, partial [Erythranthe
           guttata]
          Length = 281

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 36/67 (53%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +1

Query: 7   KKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKW--SSKH 180
           KK G  D +V+ LA             YVEK +GCLHITCRC YEFCYRCGSKW  S  H
Sbjct: 209 KKGGKSDKIVKMLAKKRNWQKCPKCKMYVEKAEGCLHITCRCKYEFCYRCGSKWSESESH 268

Query: 181 GSCSAKN 201
           G+C  K+
Sbjct: 269 GNCKQKS 275


>ref|XP_024182095.1| E3 ubiquitin-protein ligase ARIH2-like [Rosa chinensis]
 gb|PRQ50285.1| putative aminoacyltransferase, E1 ubiquitin-activating enzyme [Rosa
           chinensis]
          Length = 313

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 31/66 (46%), Positives = 43/66 (65%)
 Frame = +1

Query: 1   NGKKKGGVDLLVEKLAXXXXXXXXXXXXFYVEKNQGCLHITCRCAYEFCYRCGSKWSSKH 180
           N  ++G  DL+V +LA            FYVEK QGCLHI+CRC ++FCY CG++W+S H
Sbjct: 244 NEDERGREDLMVNQLAKEKKWKRCPRCHFYVEKTQGCLHISCRCQFQFCYGCGAEWTSNH 303

Query: 181 GSCSAK 198
           G C ++
Sbjct: 304 GGCQSQ 309


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