BLASTX nr result

ID: Acanthopanax23_contig00013731 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00013731
         (467 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017231505.1| PREDICTED: protein E6-like [Daucus carota su...    84   6e-18
ref|XP_017235163.1| PREDICTED: protein E6 [Daucus carota subsp. ...    75   5e-13

>ref|XP_017231505.1| PREDICTED: protein E6-like [Daucus carota subsp. sativus]
          Length = 120

 Score = 84.0 bits (206), Expect = 6e-18
 Identities = 56/136 (41%), Positives = 63/136 (46%), Gaps = 14/136 (10%)
 Frame = -2

Query: 367 SRQQGMGASKFGATSXXXXXXXXXXXXNDRHGMSDTRFLENGKYYYD----PXXXXXXXX 200
           +RQ G+G +K G T+             ++ GMSDTRFLENG+YYYD             
Sbjct: 4   NRQHGIGEAKLGVTNDNNYNN-------EKQGMSDTRFLENGRYYYDLNSENNYNLNANN 56

Query: 199 XXXXSRGFXXXXXXXXXXXXXXXXXXXXXXXXEYYNNRGQYGN----------NENSYEA 50
               SRGF                         YYNNRG YGN          N NSYEA
Sbjct: 57  VNENSRGFNSRNE--------------------YYNNRGNYGNSFRQQYGNNENSNSYEA 96

Query: 49  NNSMEGYNQNQEEFQE 2
           NNSMEGYN NQEEFQE
Sbjct: 97  NNSMEGYNGNQEEFQE 112


>ref|XP_017235163.1| PREDICTED: protein E6 [Daucus carota subsp. sativus]
 gb|KZN07169.1| hypothetical protein DCAR_008006 [Daucus carota subsp. sativus]
          Length = 315

 Score = 75.1 bits (183), Expect = 5e-13
 Identities = 57/178 (32%), Positives = 69/178 (38%), Gaps = 23/178 (12%)
 Frame = -2

Query: 466 GVSDTRFMEKAYTTPITSXXXXXXXXXXXXXXN---------------------SRQQGM 350
           G+SDTRFME AYTTPITS                                    +R+  +
Sbjct: 144 GMSDTRFMENAYTTPITSNNNGDRYYNNDAYVTKPQGMNNNNNDNNYNGENMYNNREHDI 203

Query: 349 GASKFGATSXXXXXXXXXXXXNDRHGMSDTRFLENGKYYYDPXXXXXXXXXXXXSRGFXX 170
           G +K G T+            N+++GMSDTR +ENG+YYYD                   
Sbjct: 204 GEAKLGVTNGNNYNNGGNMYENEKNGMSDTRVMENGRYYYD--------------LNTEK 249

Query: 169 XXXXXXXXXXXXXXXXXXXXXXEYYNNRGQYGNNENSYEANNS--MEGYNQNQEEFQE 2
                                 EY NNRG Y N+      NN   MEGYN NQEEFQE
Sbjct: 250 NYNLNNYNNNLNENSRSFNSRNEYANNRGNYRNSFKGQNGNNENFMEGYNGNQEEFQE 307


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