BLASTX nr result

ID: Acanthopanax23_contig00012938 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00012938
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05037.1| hypothetical protein Ccrd_016631 [Cynara carduncu...    74   2e-12

>gb|KVI05037.1| hypothetical protein Ccrd_016631 [Cynara cardunculus var. scolymus]
          Length = 408

 Score = 74.3 bits (181), Expect = 2e-12
 Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
 Frame = -1

Query: 518 EILGMAFWAIYGDDTYS--LIQVVIVNKTDGTEFEFSGSIWTT-GVHSWVSYVPKPFSMR 348
           + L M +W  Y ++      +QV+I NKT+ TE+ +  + + T  V+SWVS  P+P+ +R
Sbjct: 276 DYLEMTYWVDYVNEGKHDVTLQVIIKNKTNDTEWTYEANFFRTFEVNSWVSNGPQPYPIR 335

Query: 347 GGDRIEVYFRGVINEDVKVDKCGVHLVYK 261
            GD+IEVY  G  +ED+KV+KCG+HL YK
Sbjct: 336 CGDKIEVYAGG--DEDLKVEKCGIHLAYK 362