BLASTX nr result

ID: Acanthopanax23_contig00012820 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00012820
         (460 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020263213.1| zinc finger MYM-type protein 1-like [Asparag...    78   1e-13
ref|XP_020258743.1| zinc finger MYM-type protein 1-like [Asparag...    74   3e-12
ref|XP_020258812.1| uncharacterized protein LOC109835238 [Aspara...    43   3e-07

>ref|XP_020263213.1| zinc finger MYM-type protein 1-like [Asparagus officinalis]
          Length = 736

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 35/36 (97%), Positives = 35/36 (97%)
 Frame = -2

Query: 162 TCDDSLLRFIVEDEKKIDQIKKCLWRFGRKHVDSNM 55
           TCDDSLLR IVEDEKKIDQIKKCLWRFGRKHVDSNM
Sbjct: 701 TCDDSLLRLIVEDEKKIDQIKKCLWRFGRKHVDSNM 736


>ref|XP_020258743.1| zinc finger MYM-type protein 1-like [Asparagus officinalis]
          Length = 600

 Score = 73.6 bits (179), Expect = 3e-12
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -2

Query: 162 TCDDSLLRFIVEDEKKIDQIKKCLWRFGRKHVDSNM 55
           TCDD+LLR IVEDEKKIDQIKKCLWRF RKHVDSNM
Sbjct: 565 TCDDALLRLIVEDEKKIDQIKKCLWRFERKHVDSNM 600


>ref|XP_020258812.1| uncharacterized protein LOC109835238 [Asparagus officinalis]
          Length = 721

 Score = 42.7 bits (99), Expect(2) = 3e-07
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -2

Query: 162 TCDDSLLRFIVEDEKKIDQIKKCL 91
           TCDDSLLR I++DEKKIDQIK+ L
Sbjct: 681 TCDDSLLRLIMDDEKKIDQIKEML 704



 Score = 39.3 bits (90), Expect(2) = 3e-07
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = -1

Query: 103 QEMLMEIREEACRLKYVVFVF 41
           +EMLMEI EEACRL+YVVFVF
Sbjct: 701 KEMLMEIWEEACRLEYVVFVF 721


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