BLASTX nr result

ID: Acanthopanax23_contig00012174 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00012174
         (540 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017250957.1| PREDICTED: low-temperature-induced 65 kDa pr...    64   2e-08

>ref|XP_017250957.1| PREDICTED: low-temperature-induced 65 kDa protein-like [Daucus
           carota subsp. sativus]
 gb|KZM94957.1| hypothetical protein DCAR_018199 [Daucus carota subsp. sativus]
          Length = 659

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 63/198 (31%), Positives = 83/198 (41%), Gaps = 19/198 (9%)
 Frame = +3

Query: 3   ETRRAPIHESDAVRSA-------APGPIGQPGANLERPSVMAEDRNDSKTADPPVRPFNR 161
           E   API+ES AVRSA       A GP G  G NL+RPS M   R DS   DP  RPF +
Sbjct: 88  EIHGAPIYESAAVRSATLSSGQPAAGPAG--GTNLDRPS-MVGPRYDSPFVDPETRPFVQ 144

Query: 162 LQ-EEEDGQ-----------PKGNLSGLTAKDVVHNLPEDKHASFSTGNYASGNHSPTGE 305
            Q +EE G+           P   +   T +DV H LP              G ++ TG 
Sbjct: 145 WQADEEHGKHLLEEHKHAPLPCKLVDTRTGEDVYHELPH------------KGINTRTGR 192

Query: 306 NLHGQEESPGQERNKIGFPTAXXXXXXXXXXXXXXQEQNLGGQTGRIGMDTGTEEDPHGP 485
           ++  + E+P Q   +                        + G  G IG  T  + DP GP
Sbjct: 193 DVREERENPDQVGGR----------------------NVMEGIRGGIG-STCFDVDPQGP 229

Query: 486 NVQNVPSHVQAKATDRNG 539
           +++  PS+VQ K  D  G
Sbjct: 230 DIRTHPSNVQVKTIDPAG 247


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