BLASTX nr result

ID: Acanthopanax23_contig00012076 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00012076
         (613 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF60071.1|AF210726_92 latency-associated nuclear antigen [Rh...    57   4e-06
ref|WP_081998895.1| hypothetical protein [Robinsoniella peoriensis]    55   7e-06

>gb|AAF60071.1|AF210726_92 latency-associated nuclear antigen [Rhesus monkey rhadinovirus
           H26-95]
          Length = 448

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 41/142 (28%), Positives = 57/142 (40%), Gaps = 2/142 (1%)
 Frame = -2

Query: 579 PPAAHNTDNQARSNKRPAK-ACHSRSQTDP-YPGHRCPSCLKNQLRSNCRPPAKVADPQP 406
           P  A     +  S   PA  A HS   + P +PG   P+   +   S  + P+    P P
Sbjct: 113 PVLASGLSPRNTSGSSPASPASHSPPPSPPSHPGPHSPAPPSSHNPSPNQQPSSFLQPSP 172

Query: 405 TRSPRPADPPRLKPEPRTPQTPKSXXXXXXXXGQAQPNRPVQPDHTSTWVTLKPPNCRGP 226
             SP P +PP   P P +P  P+S         Q+ P+ P +P  + T      PN +  
Sbjct: 173 HDSPEPPEPPTSLPPPDSPGPPQSPTPTSSPPPQSPPDSP-EPPQSPTPQQAPSPNTQQA 231

Query: 225 VRRWQKPIRPPDRTPPFDGRTT 160
           V     P  P    PPF G T+
Sbjct: 232 VSHTDHPTGPSRPGPPFPGHTS 253


>ref|WP_081998895.1| hypothetical protein [Robinsoniella peoriensis]
          Length = 183

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 36/98 (36%), Positives = 39/98 (39%)
 Frame = -2

Query: 438 RPPAKVADPQPTRSPRPADPPRLKPEPRTPQTPKSXXXXXXXXGQAQPNRPVQPDHTSTW 259
           RPP     PQP R PRP  PPR    PR PQ P+            QP RP QP      
Sbjct: 14  RPPVPPRPPQPPRPPRPPQPPRPPQPPRPPQPPR----------PPQPPRPPQPP----- 58

Query: 258 VTLKPPNCRGPVRRWQKPIRPPDRTPPFDGRTTTEEQP 145
              +PP   GP R  Q P  P    PP   +     QP
Sbjct: 59  ---RPPQPPGPPRPPQPPRPPRPPQPPRPPQPPRPPQP 93


Top