BLASTX nr result

ID: Acanthopanax23_contig00011693 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00011693
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017222608.1| PREDICTED: serine/threonine protein phosphat...    61   3e-08
ref|XP_017243300.1| PREDICTED: serine/threonine protein phosphat...    57   1e-06
gb|KVI11624.1| Armadillo-type fold [Cynara cardunculus var. scol...    55   5e-06

>ref|XP_017222608.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' iota isoform-like [Daucus carota
           subsp. sativus]
 gb|KZM83836.1| hypothetical protein DCAR_028742 [Daucus carota subsp. sativus]
          Length = 499

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 29/38 (76%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
 Frame = +2

Query: 5   AERRRLTWERLENAAGY-QPVANNISSIVESTLCVAAC 115
           AERRR+TWERLENAA Y QPVAN++SSI+ES  CV AC
Sbjct: 462 AERRRMTWERLENAASYQQPVANDVSSIIESAPCVVAC 499


>ref|XP_017243300.1| PREDICTED: serine/threonine protein phosphatase 2A 57 kDa
           regulatory subunit B' iota isoform-like [Daucus carota
           subsp. sativus]
 gb|KZN03336.1| hypothetical protein DCAR_012092 [Daucus carota subsp. sativus]
          Length = 503

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%)
 Frame = +2

Query: 2   VAERRRLTWERLENAAGYQPVANNISSIVESTLCVAAC 115
           V ERR+LTWERLEN AG QP ANNIS+  ES+ CV  C
Sbjct: 466 VTERRKLTWERLENDAGLQPAANNISTRAESSPCVVVC 503


>gb|KVI11624.1| Armadillo-type fold [Cynara cardunculus var. scolymus]
          Length = 527

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 23/38 (60%), Positives = 29/38 (76%)
 Frame = +2

Query: 2   VAERRRLTWERLENAAGYQPVANNISSIVESTLCVAAC 115
           VAERRRLTWERLEN A +QPV  N+S + E+  C+ +C
Sbjct: 490 VAERRRLTWERLENIAAFQPVVGNVSILEETAPCIVSC 527


Top