BLASTX nr result

ID: Acanthopanax23_contig00010534 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00010534
         (546 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAY44562.1| hypothetical protein CUMW_082870 [Citrus unshiu]       57   5e-06
gb|KDO67130.1| hypothetical protein CISIN_1g000177mg [Citrus sin...    57   5e-06
ref|XP_006483658.1| PREDICTED: DDB1- and CUL4-associated factor ...    57   5e-06
ref|XP_006450073.1| DDB1- and CUL4-associated factor homolog 1 [...    57   5e-06
dbj|GAV63643.1| hypothetical protein CFOL_v3_07161 [Cephalotus f...    57   5e-06
ref|XP_015874179.1| PREDICTED: DDB1- and CUL4-associated factor ...    56   7e-06
ref|XP_021277566.1| DDB1- and CUL4-associated factor homolog 1 [...    56   1e-05
ref|XP_017983010.1| PREDICTED: DDB1- and CUL4-associated factor ...    56   1e-05

>dbj|GAY44562.1| hypothetical protein CUMW_082870 [Citrus unshiu]
          Length = 1922

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE--EDDDSQFVESLSSGDEDDFVG 334
            +++DGG G+LEIV+E  ED+DSQ VESLSSGDE+DF+G
Sbjct: 1884 VDYDGGGGLLEIVTEGDEDEDSQLVESLSSGDEEDFIG 1921


>gb|KDO67130.1| hypothetical protein CISIN_1g000177mg [Citrus sinensis]
          Length = 1922

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE--EDDDSQFVESLSSGDEDDFVG 334
            +++DGG G+LEIV+E  ED+DSQ VESLSSGDE+DF+G
Sbjct: 1884 VDYDGGGGLLEIVTEGDEDEDSQLVESLSSGDEEDFIG 1921


>ref|XP_006483658.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1 [Citrus
            sinensis]
          Length = 1922

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE--EDDDSQFVESLSSGDEDDFVG 334
            +++DGG G+LEIV+E  ED+DSQ VESLSSGDE+DF+G
Sbjct: 1884 VDYDGGGGLLEIVTEGDEDEDSQLVESLSSGDEEDFIG 1921


>ref|XP_006450073.1| DDB1- and CUL4-associated factor homolog 1 [Citrus clementina]
 gb|ESR63313.1| hypothetical protein CICLE_v10007230mg [Citrus clementina]
          Length = 1922

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/38 (68%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE--EDDDSQFVESLSSGDEDDFVG 334
            +++DGG G+LEIV+E  ED+DSQ VESLSSGDE+DF+G
Sbjct: 1884 VDYDGGGGLLEIVTEGDEDEDSQLVESLSSGDEEDFIG 1921


>dbj|GAV63643.1| hypothetical protein CFOL_v3_07161 [Cephalotus follicularis]
          Length = 1925

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 5/41 (12%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE-----EDDDSQFVESLSSGDEDDFVG 334
            ++FDGGAG+LEIV+E     +DDDSQ VES SSGDE+DF+G
Sbjct: 1880 VDFDGGAGILEIVTEGDEGDDDDDSQVVESFSSGDEEDFMG 1920


>ref|XP_015874179.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X1
            [Ziziphus jujuba]
 ref|XP_015874180.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1 isoform X2
            [Ziziphus jujuba]
          Length = 1960

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 27/38 (71%), Positives = 33/38 (86%), Gaps = 2/38 (5%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE--EDDDSQFVESLSSGDEDDFVG 334
            ++FDGGAG+LEIV+E  +DDDSQ VES SS DE+DFVG
Sbjct: 1918 VDFDGGAGILEIVTEGDDDDDSQVVESFSSDDEEDFVG 1955


>ref|XP_021277566.1| DDB1- and CUL4-associated factor homolog 1 [Herrania umbratica]
          Length = 1974

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 3/39 (7%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE---EDDDSQFVESLSSGDEDDFVG 334
            ++FDGG G+LEIV+E   +DDDSQ VES SSGDE+DF G
Sbjct: 1931 VDFDGGGGILEIVTEGEDDDDDSQLVESFSSGDEEDFAG 1969


>ref|XP_017983010.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1 [Theobroma
            cacao]
 gb|EOY29098.1| DDB1-CUL4 associated factor 1 [Theobroma cacao]
          Length = 1976

 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 3/39 (7%)
 Frame = +2

Query: 227  INFDGGAGVLEIVSE---EDDDSQFVESLSSGDEDDFVG 334
            ++FDGG G+LEIV+E   +DDDSQ VES SSGDE+DF G
Sbjct: 1933 VDFDGGGGILEIVTEGEDDDDDSQLVESFSSGDEEDFAG 1971


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