BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00009648
         (736 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017235989.1| PREDICTED: protein RTF1 homolog [Daucus caro...   306   4e-97
emb|CDO99584.1| unnamed protein product [Coffea canephora]            288   2e-90
ref|XP_019170131.1| PREDICTED: protein RTF1 homolog [Ipomoea nil...   286   2e-89
ref|XP_015065731.1| PREDICTED: protein RTF1 homolog [Solanum pen...   276   1e-85
ref|XP_004232840.1| PREDICTED: protein RTF1 homolog [Solanum lyc...   276   1e-85
ref|XP_019254207.1| PREDICTED: protein RTF1 homolog [Nicotiana a...   274   9e-85
ref|XP_016440920.1| PREDICTED: protein RTF1 homolog isoform X1 [...   274   9e-85
ref|XP_009623037.1| PREDICTED: protein RTF1 homolog [Nicotiana t...   274   9e-85
ref|XP_016440921.1| PREDICTED: protein RTF1 homolog isoform X2 [...   274   1e-84
gb|KVI08103.1| Plus-3 [Cynara cardunculus var. scolymus]              273   1e-84
ref|XP_016449178.1| PREDICTED: protein RTF1 homolog [Nicotiana t...   274   1e-84
ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein...   274   1e-84
ref|XP_006347073.1| PREDICTED: protein RTF1 homolog [Solanum tub...   273   2e-84
gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia...   271   1e-83
ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Zi...   270   2e-83
ref|XP_021649202.1| protein RTF1 homolog [Hevea brasiliensis] >g...   270   3e-83
gb|KZV47798.1| hypothetical protein F511_41277 [Dorcoceras hygro...   269   4e-83
gb|OMO65136.1| Plus-3 [Corchorus olitorius]                           270   4e-83
gb|OMO76468.1| Plus-3 [Corchorus capsularis]                          270   4e-83
gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orie...   268   2e-82

>ref|XP_017235989.1| PREDICTED: protein RTF1 homolog [Daucus carota subsp. sativus]
 gb|KZN07212.1| hypothetical protein DCAR_008049 [Daucus carota subsp. sativus]
          Length = 654

 Score =  306 bits (784), Expect = 4e-97
 Identities = 163/245 (66%), Positives = 177/245 (72%), Gaps = 2/245 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXX-LNELRAKKILRQQDSD 178
           QEKLRKQKEKM QSRK S P                        LNELRAK+ LRQQD D
Sbjct: 138 QEKLRKQKEKMNQSRKDSRPHLSSRTSVRSSARSADRATAKDDALNELRAKR-LRQQDPD 196

Query: 179 THRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSDED 355
            HR+L D +RG SGSRR  PVKRRSF   A+                        DSD D
Sbjct: 197 AHRRLGDSSRGGSGSRRYSPVKRRSFAPEAVSSSSQSGSGSGSEDEESTGDGRRGDSDYD 256

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPEST+PTFEDIK ITI+RSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLC+V
Sbjct: 257 KTSPESTIPTFEDIKAITIKRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCVV 316

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVD+ DPD+ YKLDNKMTHKYLN VWGNE+SAARWQMAMVSDSPP+++EF+QWVKEVER
Sbjct: 317 RNVDSQDPDKPYKLDNKMTHKYLNCVWGNENSAARWQMAMVSDSPPLEKEFEQWVKEVER 376

Query: 716 SGGRM 730
           SGGRM
Sbjct: 377 SGGRM 381


>emb|CDO99584.1| unnamed protein product [Coffea canephora]
          Length = 631

 Score =  288 bits (737), Expect = 2e-90
 Identities = 150/242 (61%), Positives = 168/242 (69%), Gaps = 1/242 (0%)
 Frame = +2

Query: 14  RKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDTHRKL 193
           R+  EK  + RKGSP                        LNE+RAK+ +RQQD + HRKL
Sbjct: 127 REMHEKFAKKRKGSPTQTHSRAVRSSTRFADRTAAKDDALNEIRAKR-MRQQDPEAHRKL 185

Query: 194 KDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSDEDKISPE 370
           +D  R  SGSR   PVKRR FTAA I                      + DSDEDK S E
Sbjct: 186 RDATRDGSGSRGYSPVKRRPFTAATIGSPTRSGSASHSDEEESTGDGGMADSDEDKTSAE 245

Query: 371 STVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMVRNVDA 550
           S  PT+EDIKEITIRRSKLAKW MEPFF+DLIVGCFVRVGIGK+R GPIYRLC+VRNVD 
Sbjct: 246 SKWPTYEDIKEITIRRSKLAKWFMEPFFEDLIVGCFVRVGIGKNRYGPIYRLCVVRNVDG 305

Query: 551 ADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVERSGGRM 730
           +DPDR YKLDNK T+KYLNVVWGNE+SAARWQMAM+SDSPP KEE+DQWV+EVERSGGRM
Sbjct: 306 SDPDRLYKLDNKTTYKYLNVVWGNENSAARWQMAMISDSPPAKEEYDQWVREVERSGGRM 365

Query: 731 PS 736
           PS
Sbjct: 366 PS 367


>ref|XP_019170131.1| PREDICTED: protein RTF1 homolog [Ipomoea nil]
 ref|XP_019170132.1| PREDICTED: protein RTF1 homolog [Ipomoea nil]
          Length = 642

 Score =  286 bits (731), Expect = 2e-89
 Identities = 145/241 (60%), Positives = 174/241 (72%), Gaps = 1/241 (0%)
 Frame = +2

Query: 17  KQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDTHRKLK 196
           K + K  Q+RK SPP                       LNE+RAK+  RQQDS+T+ K +
Sbjct: 136 KLRGKSSQARKSSPPPTQSRGTRSSTRALGRAADRDGALNEIRAKRA-RQQDSETNWKTR 194

Query: 197 DVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSDEDKISPES 373
           D AR  SG+R   PVKRR+FTAA +                      + DSD+DK SP+S
Sbjct: 195 DAARRGSGNRGYSPVKRRAFTAATLGSSPNRAESGSQSDDGESGDEVMADSDDDKTSPDS 254

Query: 374 TVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMVRNVDAA 553
            +PT+E+IKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIGKS++GPIYRLCMVRNVDA 
Sbjct: 255 KLPTYEEIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSKSGPIYRLCMVRNVDAT 314

Query: 554 DPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVERSGGRMP 733
           DP+RQYKL+NK T+KYLNV+WGNESSAARWQMAM+SDSPP+++EF+QWV+EVERSGGRMP
Sbjct: 315 DPNRQYKLENKTTYKYLNVIWGNESSAARWQMAMISDSPPLRDEFEQWVREVERSGGRMP 374

Query: 734 S 736
           S
Sbjct: 375 S 375


>ref|XP_015065731.1| PREDICTED: protein RTF1 homolog [Solanum pennellii]
          Length = 645

 Score =  276 bits (707), Expect = 1e-85
 Identities = 138/204 (67%), Positives = 164/204 (80%), Gaps = 2/204 (0%)
 Frame = +2

Query: 131 LNELRAKKILRQQDSDTHRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXX 307
           LNE+RAK+  +QQD +   KL+D AR  SGSR   P+KRRSFTAA++             
Sbjct: 179 LNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHS 238

Query: 308 XXXXXXXXX-INDSDEDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVR 484
                     ++DSD+DK SPES +PTFEDIKEI+IRRSKLAKW MEPFFD+LIVGCFVR
Sbjct: 239 NEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 298

Query: 485 VGIGKSRTGPIYRLCMVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSD 664
           VGIG+SR+GPIYRLC+VRNVDA+DP+RQYKL+NK T K+LNVVWGNE+SAARWQMAMVSD
Sbjct: 299 VGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSD 358

Query: 665 SPPIKEEFDQWVKEVERSGGRMPS 736
           SPP+++EFDQWV+EVERSGGRMPS
Sbjct: 359 SPPLRDEFDQWVREVERSGGRMPS 382


>ref|XP_004232840.1| PREDICTED: protein RTF1 homolog [Solanum lycopersicum]
          Length = 645

 Score =  276 bits (706), Expect = 1e-85
 Identities = 137/204 (67%), Positives = 164/204 (80%), Gaps = 2/204 (0%)
 Frame = +2

Query: 131 LNELRAKKILRQQDSDTHRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXX 307
           LNE+RAK+  +QQD +   KL+D AR  SGSR   P+KRRSFTAA++             
Sbjct: 179 LNEIRAKRARQQQDPEGQFKLRDAARKGSGSRGYSPIKRRSFTAASLGSSPTRGESDSHS 238

Query: 308 XXXXXXXXX-INDSDEDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVR 484
                     ++DSD+DK SPES +PTFEDIKEI+IRRSKLAKW MEPFFD+LIVGCFVR
Sbjct: 239 NEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 298

Query: 485 VGIGKSRTGPIYRLCMVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSD 664
           VGIG+SR+GPIYRLC+VRNVDA+DP+RQYKL+NK T K+LNVVWGNE+SAARWQMAM+SD
Sbjct: 299 VGIGRSRSGPIYRLCVVRNVDASDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMISD 358

Query: 665 SPPIKEEFDQWVKEVERSGGRMPS 736
           SPP+++EFDQWV+EVERSGGRMPS
Sbjct: 359 SPPLRDEFDQWVREVERSGGRMPS 382


>ref|XP_019254207.1| PREDICTED: protein RTF1 homolog [Nicotiana attenuata]
 gb|OIS97522.1| protein rtf1-like protein [Nicotiana attenuata]
          Length = 654

 Score =  274 bits (701), Expect = 9e-85
 Identities = 148/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 142 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 200

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 201 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDD 260

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 261 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 319

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN+VWGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 320 RNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 379

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 380 SGGRMPS 386


>ref|XP_016440920.1| PREDICTED: protein RTF1 homolog isoform X1 [Nicotiana tabacum]
          Length = 654

 Score =  274 bits (701), Expect = 9e-85
 Identities = 148/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 142 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 200

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 201 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNGGDSSGDDGMDDSDDD 260

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 261 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 319

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN+VWGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 320 RNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 379

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 380 SGGRMPS 386


>ref|XP_009623037.1| PREDICTED: protein RTF1 homolog [Nicotiana tomentosiformis]
 ref|XP_018632532.1| PREDICTED: protein RTF1 homolog [Nicotiana tomentosiformis]
          Length = 654

 Score =  274 bits (701), Expect = 9e-85
 Identities = 148/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 142 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 200

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 201 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDD 260

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 261 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 319

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN+VWGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 320 RNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 379

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 380 SGGRMPS 386


>ref|XP_016440921.1| PREDICTED: protein RTF1 homolog isoform X2 [Nicotiana tabacum]
          Length = 660

 Score =  274 bits (701), Expect = 1e-84
 Identities = 148/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 148 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 206

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 207 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNGGDSSGDDGMDDSDDD 266

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 267 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 325

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN+VWGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 326 RNVDATDPNRQYKLENKTTFKFLNLVWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 385

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 386 SGGRMPS 392


>gb|KVI08103.1| Plus-3 [Cynara cardunculus var. scolymus]
          Length = 638

 Score =  273 bits (699), Expect = 1e-84
 Identities = 143/246 (58%), Positives = 171/246 (69%), Gaps = 1/246 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXX-LNELRAKKILRQQDSD 178
           +  ++KQKEK  QSRK SPP                        LNELRA+K LRQQD +
Sbjct: 140 KNSIKKQKEKSTQSRKDSPPPHTVNRAVRSSARSTDRATAIDVALNELRARKRLRQQDPE 199

Query: 179 THRKLKDVARGSSGSRRLPVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSDEDK 358
           +HRK +D   G        VKR+ FT AA+                      + +SD++K
Sbjct: 200 SHRKRRDADTG--------VKRKGFTPAALSTSSHSDSGSHSEDEESTGG--MGESDDEK 249

Query: 359 ISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMVR 538
           +S EST+  +ED+K ITIRRSKLAKW MEPFF++LIVGCFVRVGIGKS++GPIYRLC+VR
Sbjct: 250 VSRESTILMYEDVKGITIRRSKLAKWFMEPFFEELIVGCFVRVGIGKSKSGPIYRLCIVR 309

Query: 539 NVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVERS 718
           NVDAADPDRQYKL+NKMTHKYLNVVWGNE+SAARWQMAM+SDSPP+KEEFDQ ++EVER 
Sbjct: 310 NVDAADPDRQYKLENKMTHKYLNVVWGNENSAARWQMAMISDSPPLKEEFDQLIREVERH 369

Query: 719 GGRMPS 736
           GGRMPS
Sbjct: 370 GGRMPS 375


>ref|XP_016449178.1| PREDICTED: protein RTF1 homolog [Nicotiana tabacum]
          Length = 654

 Score =  274 bits (700), Expect = 1e-84
 Identities = 147/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 142 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 200

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 201 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDD 260

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 261 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 319

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN++WGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 320 RNVDATDPNRQYKLENKTTFKFLNLIWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 379

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 380 SGGRMPS 386


>ref|XP_009799534.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
           [Nicotiana sylvestris]
          Length = 654

 Score =  274 bits (700), Expect = 1e-84
 Identities = 147/247 (59%), Positives = 173/247 (70%), Gaps = 2/247 (0%)
 Frame = +2

Query: 2   QEKLRKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDT 181
           QEK+  + +   Q RK S P                       LNE+RAK+  RQQD + 
Sbjct: 142 QEKISGKIKNRSQPRKPSSPPSHSRGMRSSTRALDRAADRDDALNEIRAKRA-RQQDPEG 200

Query: 182 HRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDED 355
           + KL+D  R  SG R   PVKRRSFTAAA+                       ++DSD+D
Sbjct: 201 NWKLRDAGRKGSGGRGYSPVKRRSFTAAALGSSPTRGESDSRSNEGDSSGDDGMDDSDDD 260

Query: 356 KISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMV 535
           K SPES +PTFEDIKEITIRRSKLAKW MEPFFD+LIVGCFVRVGIG+SR+GPIYRLC+V
Sbjct: 261 K-SPESQLPTFEDIKEITIRRSKLAKWFMEPFFDELIVGCFVRVGIGRSRSGPIYRLCIV 319

Query: 536 RNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVER 715
           RNVDA DP+RQYKL+NK T K+LN++WGN+SSAARWQMAMVSDSPP+++EFDQWVKEVER
Sbjct: 320 RNVDATDPNRQYKLENKTTFKFLNLIWGNDSSAARWQMAMVSDSPPLRDEFDQWVKEVER 379

Query: 716 SGGRMPS 736
           SGGRMPS
Sbjct: 380 SGGRMPS 386


>ref|XP_006347073.1| PREDICTED: protein RTF1 homolog [Solanum tuberosum]
 ref|XP_015164153.1| PREDICTED: protein RTF1 homolog [Solanum tuberosum]
 ref|XP_015164154.1| PREDICTED: protein RTF1 homolog [Solanum tuberosum]
          Length = 652

 Score =  273 bits (699), Expect = 2e-84
 Identities = 136/204 (66%), Positives = 162/204 (79%), Gaps = 2/204 (0%)
 Frame = +2

Query: 131 LNELRAKKILRQQDSDTHRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXX 307
           LNE+RAK+  +QQD +   KL+D AR  SG R   P+KRRSFTAA +             
Sbjct: 179 LNEIRAKRARQQQDPEGQFKLRDAARKGSGGRGYSPIKRRSFTAATLGSSPTRGESDSHS 238

Query: 308 XXXXXXXXX-INDSDEDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVR 484
                     ++DSD+DK SPES +PTFEDIKEI+IRRSKLAKW MEPFFD+LIVGCFVR
Sbjct: 239 NEGDSSADDGMDDSDDDKSSPESQLPTFEDIKEISIRRSKLAKWFMEPFFDELIVGCFVR 298

Query: 485 VGIGKSRTGPIYRLCMVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSD 664
           VGIG+SR+GPIYRLC+VRNVD++DP+RQYKL+NK T K+LNVVWGNE+SAARWQMAMVSD
Sbjct: 299 VGIGRSRSGPIYRLCVVRNVDSSDPNRQYKLENKTTSKFLNVVWGNENSAARWQMAMVSD 358

Query: 665 SPPIKEEFDQWVKEVERSGGRMPS 736
           SPP+++EFDQWV+EVERSGGRMPS
Sbjct: 359 SPPLRDEFDQWVREVERSGGRMPS 382


>gb|PON36800.1| RNA polymerase-associated protein Rtf [Parasponia andersonii]
          Length = 658

 Score =  271 bits (694), Expect = 1e-83
 Identities = 148/249 (59%), Positives = 171/249 (68%), Gaps = 4/249 (1%)
 Frame = +2

Query: 2   QEKLRKQ---KEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQD 172
           +EKLR +   K K  QSRK +PP                       LNELRAK+ L+QQD
Sbjct: 141 KEKLRPKWDNKGKSQQSRKSTPPLQSSRVRSSARSADRAAAKDDA-LNELRAKR-LKQQD 198

Query: 173 SDTHRKLKDVARGSSGSRR-LPVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSD 349
            + HRKL+D +RGSSG+R  L  KR+SFTA ++                          D
Sbjct: 199 PEAHRKLRDASRGSSGNRNFLNNKRKSFTATSVSSSSRSDSESQSRSEDEGSTGDGGMID 258

Query: 350 EDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLC 529
            D   P S  PTFEDIKEITIRRSKLAKW MEPFF++LIVGCFVRVGIG+S++GPIYRLC
Sbjct: 259 SDDERPGSDGPTFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLC 318

Query: 530 MVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEV 709
           MVRNVDA DPDRQYKL+NK THKYLNVVWGNE+SAARWQMAMVSDS PI+EEF QWV+EV
Sbjct: 319 MVRNVDATDPDRQYKLENKNTHKYLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVREV 378

Query: 710 ERSGGRMPS 736
           ER+GGRMP+
Sbjct: 379 ERNGGRMPT 387


>ref|XP_015872019.1| PREDICTED: protein RTF1 homolog, partial [Ziziphus jujuba]
          Length = 638

 Score =  270 bits (691), Expect = 2e-83
 Identities = 147/250 (58%), Positives = 176/250 (70%), Gaps = 5/250 (2%)
 Frame = +2

Query: 2   QEKLRK--QKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDS 175
           +EKLR   +K K  QSRK +PP                       LNELRAK+ L+QQD 
Sbjct: 124 KEKLRPKWEKGKTTQSRKETPPLPSSRVRSSARSADRAAAKDDA-LNELRAKR-LKQQDP 181

Query: 176 DTHRKLKDVARGSSGSRRLP-VKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX--INDS 346
           + HRKL+D +RGSSGSR      R+SFTAA++                        + DS
Sbjct: 182 EAHRKLRDASRGSSGSRSFSHTNRKSFTAASLSSSSQSESESGSGSEDEGSTGDGGMIDS 241

Query: 347 DEDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRL 526
           D+++  P S  PTF+DI+EITIRRSKLAKW+MEPFF++LIVGCFVRVGIG+S++GPIYRL
Sbjct: 242 DDERGMPGSEGPTFDDIREITIRRSKLAKWIMEPFFEELIVGCFVRVGIGRSKSGPIYRL 301

Query: 527 CMVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKE 706
           CMVRNVDA DPDRQY+L+NK T+KYLNVVWGNE+SAARWQMAMVSDS PI+EEF QWV+E
Sbjct: 302 CMVRNVDATDPDRQYRLENKTTYKYLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVRE 361

Query: 707 VERSGGRMPS 736
           VERSGGRMPS
Sbjct: 362 VERSGGRMPS 371


>ref|XP_021649202.1| protein RTF1 homolog [Hevea brasiliensis]
 ref|XP_021649203.1| protein RTF1 homolog [Hevea brasiliensis]
 ref|XP_021649204.1| protein RTF1 homolog [Hevea brasiliensis]
 ref|XP_021649205.1| protein RTF1 homolog [Hevea brasiliensis]
          Length = 660

 Score =  270 bits (691), Expect = 3e-83
 Identities = 140/243 (57%), Positives = 174/243 (71%), Gaps = 2/243 (0%)
 Frame = +2

Query: 14  RKQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSDTHRKL 193
           ++  E+  +SRK +PP                       LNELRAK+ L+QQD + HRK+
Sbjct: 149 KRDSERPTRSRKETPPLPSSRGVRTSARSADRAAAKDDALNELRAKR-LKQQDPEAHRKM 207

Query: 194 KDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX-INDSDEDKISP 367
           +DV+RG+SG R L P+KR+ FT+A++                       + DSDED+  P
Sbjct: 208 RDVSRGTSGGRGLSPIKRKHFTSASLSSSSSESESRSHSEDEGSTGDGGMGDSDEDR-DP 266

Query: 368 ESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMVRNVD 547
            S  PTF+DIKEITIRRSKLAKW MEP+F++LIVGCFVRVGIG+S++GPIYRLC+VRNVD
Sbjct: 267 GSEGPTFDDIKEITIRRSKLAKWFMEPWFEELIVGCFVRVGIGRSKSGPIYRLCLVRNVD 326

Query: 548 AADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVERSGGR 727
           AADPDRQYKL+NK T+KYLNVVWGNESSAARWQMAMVSDS P +EE+ QW++EVERSGGR
Sbjct: 327 AADPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPTEEEYKQWMREVERSGGR 386

Query: 728 MPS 736
           MP+
Sbjct: 387 MPT 389


>gb|KZV47798.1| hypothetical protein F511_41277 [Dorcoceras hygrometricum]
          Length = 621

 Score =  269 bits (688), Expect = 4e-83
 Identities = 131/184 (71%), Positives = 146/184 (79%)
 Frame = +2

Query: 185 RKLKDVARGSSGSRRLPVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSDEDKIS 364
           ++ +D A+GSSG R  PVKRR+FT+A +                      + DSDEDK+S
Sbjct: 178 KRRRDAAKGSSGRRYSPVKRRTFTSATVSSPSRSGSESQSDEEESTGDGGMADSDEDKMS 237

Query: 365 PESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLCMVRNV 544
            ES +PT+EDIK+ITIRRSKLAKW MEPFFD+LIVGCFVRVGIGKSRTGPIYRLCMVRNV
Sbjct: 238 IESKLPTYEDIKDITIRRSKLAKWFMEPFFDELIVGCFVRVGIGKSRTGPIYRLCMVRNV 297

Query: 545 DAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEVERSGG 724
           DA DPDRQYKLDNK THK+LNVVWGNESSAARWQMAMVSDSPP K EFDQW +EVERSGG
Sbjct: 298 DATDPDRQYKLDNKTTHKFLNVVWGNESSAARWQMAMVSDSPPAKTEFDQWFREVERSGG 357

Query: 725 RMPS 736
            MPS
Sbjct: 358 HMPS 361


>gb|OMO65136.1| Plus-3 [Corchorus olitorius]
          Length = 656

 Score =  270 bits (690), Expect = 4e-83
 Identities = 144/249 (57%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
 Frame = +2

Query: 5   EKLRKQKE--KMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSD 178
           EK+R +++  +  +SRK +PP                       LNELRAK+ L+QQD +
Sbjct: 144 EKIRSKRDNDRPNRSRKETPPLPSSRGVRSSARSADRAAAKDDALNELRAKR-LKQQDPE 202

Query: 179 THRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX--INDSD 349
            HRKL+D +RG +GSR L PVKR+SFTA+++                        + DSD
Sbjct: 203 AHRKLRDASRGGTGSRGLSPVKRKSFTASSLSSSSQSESESRSNSEDEGSTGDGAMVDSD 262

Query: 350 EDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLC 529
           +D+ +     PTFEDIKEITIRRSKLAKW MEPFF++LIVGCFVRVGIG+S++GPIYRLC
Sbjct: 263 DDRGTRGPDGPTFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLC 322

Query: 530 MVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEV 709
           MVRNVDA+DPDR YKL+NK THKYLNVVWGNESSAARWQMAM+SDSPP +EEF Q ++EV
Sbjct: 323 MVRNVDASDPDRTYKLENKTTHKYLNVVWGNESSAARWQMAMISDSPPQEEEFKQLIREV 382

Query: 710 ERSGGRMPS 736
           ERSGGRMPS
Sbjct: 383 ERSGGRMPS 391


>gb|OMO76468.1| Plus-3 [Corchorus capsularis]
          Length = 659

 Score =  270 bits (690), Expect = 4e-83
 Identities = 145/249 (58%), Positives = 176/249 (70%), Gaps = 5/249 (2%)
 Frame = +2

Query: 5   EKLR--KQKEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQDSD 178
           EK+R  + K++  +SRK +PP                       LNELRAK+ L+QQD +
Sbjct: 144 EKIRSKRDKDRPNRSRKETPPLPSSRGVRSSARSADRAAAKDDALNELRAKR-LKQQDPE 202

Query: 179 THRKLKDVARGSSGSRRL-PVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXX--INDSD 349
             RKL+D +RGS+GSR L PVKR+SFTA+++                        + DSD
Sbjct: 203 ARRKLRDASRGSTGSRGLSPVKRKSFTASSLSSSSQSESESRSNSEDEGSTGDGAMVDSD 262

Query: 350 EDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLC 529
           +D+ +     PTFEDIKEITIRRSKLAKW MEPFF++LIVGCFVRVGIG+S++GPIYRLC
Sbjct: 263 DDRGTRGPDGPTFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGPIYRLC 322

Query: 530 MVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEV 709
           MVRNVDA+DPDR YKL+NK THKYLNVVWGNESSAARWQMAM+SDSPP +EEF Q ++EV
Sbjct: 323 MVRNVDASDPDRTYKLENKTTHKYLNVVWGNESSAARWQMAMISDSPPQEEEFKQLIREV 382

Query: 710 ERSGGRMPS 736
           ERSGGRMPS
Sbjct: 383 ERSGGRMPS 391


>gb|PON96093.1| RNA polymerase-associated protein Rtf [Trema orientalis]
          Length = 658

 Score =  268 bits (686), Expect = 2e-82
 Identities = 147/249 (59%), Positives = 170/249 (68%), Gaps = 4/249 (1%)
 Frame = +2

Query: 2   QEKLRKQ---KEKMMQSRKGSPPXXXXXXXXXXXXXXXXXXXXXXXLNELRAKKILRQQD 172
           +EKLR +   K K  QSRK +PP                       LNELRAK+ L+QQD
Sbjct: 141 KEKLRPKWDNKGKSQQSRKSTPPLQSSRVRSSARSADRAAAKDDA-LNELRAKR-LKQQD 198

Query: 173 SDTHRKLKDVARGSSGSRR-LPVKRRSFTAAAIXXXXXXXXXXXXXXXXXXXXXXINDSD 349
            + HRKL+D +RGSSG+R  L  KR+SFTA ++                          D
Sbjct: 199 PEAHRKLRDASRGSSGNRNFLNNKRKSFTATSVSSSSRSDSESQSRSEDEGSTGDGGMID 258

Query: 350 EDKISPESTVPTFEDIKEITIRRSKLAKWLMEPFFDDLIVGCFVRVGIGKSRTGPIYRLC 529
            D   P S  PTFEDIKEITIRRSKLAKW MEPFF++LIVGCFVRVGIG+S++G IYRLC
Sbjct: 259 SDDERPGSDGPTFEDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKSGSIYRLC 318

Query: 530 MVRNVDAADPDRQYKLDNKMTHKYLNVVWGNESSAARWQMAMVSDSPPIKEEFDQWVKEV 709
           MVRNVDA DPDRQYKL+NK THKYLNVVWGNE+SAARWQMAMVSDS PI+EEF QWV+EV
Sbjct: 319 MVRNVDATDPDRQYKLENKNTHKYLNVVWGNENSAARWQMAMVSDSAPIEEEFKQWVREV 378

Query: 710 ERSGGRMPS 736
           ER+GGRMP+
Sbjct: 379 ERNGGRMPT 387