BLASTX nr result
ID: Acanthopanax23_contig00008939
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00008939
(544 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006370586.1| hypothetical protein POPTR_0001s44050g [Popu... 149 7e-43
gb|ABK95573.1| unknown [Populus trichocarpa] >gi|1334344400|gb|P... 149 1e-42
ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein ... 148 1e-42
ref|XP_015897689.1| PREDICTED: glycine-rich RNA-binding protein ... 147 2e-42
ref|XP_019413203.1| PREDICTED: glycine-rich RNA-binding protein ... 147 4e-42
ref|XP_011048254.1| PREDICTED: glycine-rich RNA-binding protein ... 147 5e-42
ref|XP_018852254.1| PREDICTED: glycine-rich RNA-binding protein ... 146 1e-41
ref|XP_002316957.1| RNA-binding family protein [Populus trichoca... 146 1e-41
ref|XP_021827713.1| organelle RRM domain-containing protein 2, m... 145 1e-41
gb|PON60510.1| Splicing factor-like protein [Trema orientalis] 145 1e-41
gb|PON55761.1| Splicing factor-like protein [Parasponia andersonii] 145 1e-41
ref|XP_023914026.1| organelle RRM domain-containing protein 2, m... 145 2e-41
ref|XP_024020370.1| organelle RRM domain-containing protein 2, m... 145 3e-41
ref|XP_022880147.1| organelle RRM domain-containing protein 2, m... 145 3e-41
ref|XP_019449963.1| PREDICTED: glycine-rich RNA-binding protein ... 145 3e-41
ref|XP_007133034.1| hypothetical protein PHAVU_011G145700g [Phas... 144 4e-41
ref|XP_011030908.1| PREDICTED: glycine-rich RNA-binding protein ... 144 5e-41
ref|XP_008226798.1| PREDICTED: glycine-rich RNA-binding protein ... 144 8e-41
ref|XP_008454580.1| PREDICTED: glycine-rich RNA-binding protein ... 144 1e-40
gb|KHN28381.1| Glycine-rich RNA-binding protein 2 [Glycine soja] 143 1e-40
>ref|XP_006370586.1| hypothetical protein POPTR_0001s44050g [Populus trichocarpa]
Length = 137
Score = 149 bits (375), Expect = 7e-43
Identities = 72/89 (80%), Positives = 78/89 (87%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE LQEAF+KFGEVV A+VVTDR+SGYSKGFGFVRY TL++AA GIKGMDGQF
Sbjct: 48 GLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQF 107
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYG 267
LDGWVIFAEYARP+QPP Q N G YG
Sbjct: 108 LDGWVIFAEYARPKQPPSQPQNNMGPGYG 136
>gb|ABK95573.1| unknown [Populus trichocarpa]
gb|PNT59441.1| hypothetical protein POPTR_001G409800v3 [Populus trichocarpa]
Length = 149
Score = 149 bits (375), Expect = 1e-42
Identities = 72/89 (80%), Positives = 78/89 (87%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE LQEAF+KFGEVV A+VVTDR+SGYSKGFGFVRY TL++AA GIKGMDGQF
Sbjct: 60 GLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYGTLEDAAEGIKGMDGQF 119
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYG 267
LDGWVIFAEYARP+QPP Q N G YG
Sbjct: 120 LDGWVIFAEYARPKQPPSQPQNNMGPGYG 148
>ref|XP_003540046.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Glycine max]
gb|KHN38590.1| Nucleolin [Glycine soja]
gb|KRH25927.1| hypothetical protein GLYMA_12G139200 [Glycine max]
Length = 145
Score = 148 bits (374), Expect = 1e-42
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE+L+E FAKFGEVVHARVVTDR SGYSKGFGFV+YAT++EAA GI+GMDG+F
Sbjct: 55 GLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEEAAKGIEGMDGKF 114
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPR PP Q NN YG Q
Sbjct: 115 LDGWVIFAEYARPRPPPGQSLNNNSPQYGRQ 145
>ref|XP_015897689.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial
[Ziziphus jujuba]
Length = 140
Score = 147 bits (372), Expect = 2e-42
Identities = 71/89 (79%), Positives = 78/89 (87%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKL E FAKFGEVVHARVVTDR SGYSKGFGFV+YATL++AA GI+GMDG+F
Sbjct: 50 GLSKRTTTEKLHEEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKF 109
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYG 267
LDGWVIFAEYARPR PP Q+ N +YG
Sbjct: 110 LDGWVIFAEYARPRPPPGQIQNNMTSSYG 138
>ref|XP_019413203.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Lupinus angustifolius]
ref|XP_019413204.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Lupinus angustifolius]
gb|OIV99139.1| hypothetical protein TanjilG_01114 [Lupinus angustifolius]
Length = 145
Score = 147 bits (371), Expect = 4e-42
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE+L+E FAKFGEVVHARVVTDR SGYSKGFGFV+YAT+DEAA GI+GMDG+F
Sbjct: 55 GLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIDEAAKGIEGMDGKF 114
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPR PP Q N YGG+
Sbjct: 115 LDGWVIFAEYARPRPPPGQPVDNPTPYYGGR 145
>ref|XP_011048254.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Populus euphratica]
Length = 157
Score = 147 bits (371), Expect = 5e-42
Identities = 72/89 (80%), Positives = 78/89 (87%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE LQEAF+KFGEVV A+VVTDR+SGYSKGFGFVRYATL++AA GIKGMDGQF
Sbjct: 59 GLSKRTTTEGLQEAFSKFGEVVQAKVVTDRTSGYSKGFGFVRYATLEDAAEGIKGMDGQF 118
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYG 267
LDGWVIFAEYARP+QP Q N G YG
Sbjct: 119 LDGWVIFAEYARPKQPASQPQNNMGPGYG 147
>ref|XP_018852254.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Juglans regia]
Length = 141
Score = 146 bits (368), Expect = 1e-41
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKLQEAF++FGEV+HARVVTDR SGYSKGFGFVRYATL+EAA GI+GMDG+F
Sbjct: 51 GLSKRTTTEKLQEAFSQFGEVLHARVVTDRVSGYSKGFGFVRYATLEEAAKGIEGMDGKF 110
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPRQPP P NN
Sbjct: 111 LDGWVIFAEYARPRQPPGP-PENN 133
>ref|XP_002316957.1| RNA-binding family protein [Populus trichocarpa]
gb|PNT13222.1| hypothetical protein POPTR_011G130300v3 [Populus trichocarpa]
gb|PNT13223.1| hypothetical protein POPTR_011G130300v3 [Populus trichocarpa]
gb|PNT13224.1| hypothetical protein POPTR_011G130300v3 [Populus trichocarpa]
Length = 153
Score = 146 bits (368), Expect = 1e-41
Identities = 70/86 (81%), Positives = 77/86 (89%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTT+E LQEAF+KFGEVV ARVVTDR SGYSKGFGFV+YATL++AA GIKGMDGQF
Sbjct: 61 GLSKRTTSEGLQEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQF 120
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGL 258
LDGWVIFAEYARPRQPP + N G+
Sbjct: 121 LDGWVIFAEYARPRQPPSEPQNNTGM 146
>ref|XP_021827713.1| organelle RRM domain-containing protein 2, mitochondrial [Prunus
avium]
Length = 142
Score = 145 bits (367), Expect = 1e-41
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTT+EKLQEAF++FGEVVHARVVTDR SGYSKGFGFVRYATL++A GI+GMDG+F
Sbjct: 52 GLSKRTTSEKLQEAFSQFGEVVHARVVTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKF 111
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPRQPP LP NN
Sbjct: 112 LDGWVIFAEYARPRQPP-PLPENN 134
>gb|PON60510.1| Splicing factor-like protein [Trema orientalis]
Length = 144
Score = 145 bits (367), Expect = 1e-41
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKLQEAF++FGEVVHARVVTDR SGYSKGFGFV+YATL++AA GI+GMDG+F
Sbjct: 54 GLSKRTTTEKLQEAFSQFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIQGMDGKF 113
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPR PP PGNN
Sbjct: 114 LDGWVIFAEYARPR-PPLGQPGNN 136
>gb|PON55761.1| Splicing factor-like protein [Parasponia andersonii]
Length = 144
Score = 145 bits (367), Expect = 1e-41
Identities = 71/84 (84%), Positives = 78/84 (92%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKLQEAF++FGEVVHARVVTDR SGYSKGFGFV+YATL++AA GI+GMDG+F
Sbjct: 54 GLSKRTTTEKLQEAFSQFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAQGIQGMDGKF 113
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPR PP PGNN
Sbjct: 114 LDGWVIFAEYARPR-PPLGQPGNN 136
>ref|XP_023914026.1| organelle RRM domain-containing protein 2, mitochondrial [Quercus
suber]
gb|POF08724.1| glycine-rich rna-binding protein 6, mitochondrial [Quercus suber]
Length = 145
Score = 145 bits (366), Expect = 2e-41
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKL EAF++FGEVVHA+VVTDR SGYSKGFGFVRYATL++AA GI+GMDG+F
Sbjct: 55 GLSKRTTTEKLHEAFSQFGEVVHAKVVTDRVSGYSKGFGFVRYATLEDAAKGIEGMDGKF 114
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPRQPP N YG Q
Sbjct: 115 LDGWVIFAEYARPRQPPTPPENNMYPPYGHQ 145
>ref|XP_024020370.1| organelle RRM domain-containing protein 2, mitochondrial [Morus
notabilis]
Length = 142
Score = 145 bits (365), Expect = 3e-41
Identities = 70/84 (83%), Positives = 78/84 (92%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKL E+F++FGEVVHARVVTDR SGYSKGFGFV+YATL++AA GI+GMDG+F
Sbjct: 52 GLSKRTTTEKLHESFSQFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGIEGMDGKF 111
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPR PP Q PGNN
Sbjct: 112 LDGWVIFAEYARPRPPPGQ-PGNN 134
>ref|XP_022880147.1| organelle RRM domain-containing protein 2, mitochondrial-like [Olea
europaea var. sylvestris]
Length = 145
Score = 145 bits (365), Expect = 3e-41
Identities = 72/88 (81%), Positives = 79/88 (89%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE L++AFAKFGEV+HA+VVTDR SGYSKG+GFVRYATL+EAAAGIKGMDGQF
Sbjct: 57 GLSKRTTTEGLRDAFAKFGEVLHAKVVTDRVSGYSKGYGFVRYATLEEAAAGIKGMDGQF 116
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTY 264
LDGWVIFAEYARPR PP L NN T+
Sbjct: 117 LDGWVIFAEYARPRPPPPYL--NNAPTF 142
>ref|XP_019449963.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Lupinus angustifolius]
gb|OIW08292.1| hypothetical protein TanjilG_02968 [Lupinus angustifolius]
Length = 145
Score = 145 bits (365), Expect = 3e-41
Identities = 71/91 (78%), Positives = 78/91 (85%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTE+L+E FAKFGEVVHARVVTDR SGYSKGFGFV+YAT++EA GI+GMDG+F
Sbjct: 55 GLSKRTTTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIEEAGKGIEGMDGKF 114
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPR PP Q N YGGQ
Sbjct: 115 LDGWVIFAEYARPRPPPGQPIQNPTPYYGGQ 145
>ref|XP_007133034.1| hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
gb|ESW05028.1| hypothetical protein PHAVU_011G145700g [Phaseolus vulgaris]
Length = 144
Score = 144 bits (364), Expect = 4e-41
Identities = 72/91 (79%), Positives = 79/91 (86%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKL+E F+KFGEVVHARVVTDR SGYSKGFGFV+YATL+EAA GI+GMDG+F
Sbjct: 55 GLSKRTTTEKLREEFSKFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAAKGIEGMDGKF 114
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPR PP L NN +G Q
Sbjct: 115 LDGWVIFAEYARPRPPPGHL-NNNSPQFGRQ 144
>ref|XP_011030908.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Populus euphratica]
Length = 151
Score = 144 bits (364), Expect = 5e-41
Identities = 69/86 (80%), Positives = 77/86 (89%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTT+E L+EAF+KFGEVV ARVVTDR SGYSKGFGFV+YATL++AA GIKGMDGQF
Sbjct: 59 GLSKRTTSEGLREAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLEDAAEGIKGMDGQF 118
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGL 258
LDGWVIFAEYARPRQPP + N G+
Sbjct: 119 LDGWVIFAEYARPRQPPSEPQNNTGM 144
>ref|XP_008226798.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Prunus mume]
Length = 142
Score = 144 bits (362), Expect = 8e-41
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTT+EKLQEAF++FGEVVHARVVTDR SGYSKGFGFVRYATL++A GI+GMDG+F
Sbjct: 52 GLSKRTTSEKLQEAFSQFGEVVHARVVTDRVSGYSKGFGFVRYATLEDAGKGIEGMDGKF 111
Query: 181 LDGWVIFAEYARPRQPPCQLPGNN 252
LDGWVIFAEYARPRQPP P NN
Sbjct: 112 LDGWVIFAEYARPRQPPSP-PENN 134
>ref|XP_008454580.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial
[Cucumis melo]
Length = 173
Score = 144 bits (364), Expect = 1e-40
Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRTTTEKL EAF+KFGEVVHARVVTDR++GYSKGFGFV+YATL++AA GI+GMDG+F
Sbjct: 85 GLSKRTTTEKLHEAFSKFGEVVHARVVTDRATGYSKGFGFVKYATLEDAAKGIEGMDGKF 144
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLT-YGGQ 273
LDGWVIFAEYARPR PP NNG YG Q
Sbjct: 145 LDGWVIFAEYARPRPPP---ENNNGFAPYGRQ 173
>gb|KHN28381.1| Glycine-rich RNA-binding protein 2 [Glycine soja]
Length = 143
Score = 143 bits (361), Expect = 1e-40
Identities = 69/91 (75%), Positives = 78/91 (85%)
Frame = +1
Query: 1 GLSKRTTTEKLQEAFAKFGEVVHARVVTDRSSGYSKGFGFVRYATLDEAAAGIKGMDGQF 180
GLSKRT TE+L+E FAKFGEVVHARVVTDR SGYSKGFGFV+YAT+++AA GI+GMDG+F
Sbjct: 53 GLSKRTNTERLREEFAKFGEVVHARVVTDRVSGYSKGFGFVQYATIEDAAKGIEGMDGKF 112
Query: 181 LDGWVIFAEYARPRQPPCQLPGNNGLTYGGQ 273
LDGWVIFAEYARPR PP Q +N YG Q
Sbjct: 113 LDGWVIFAEYARPRPPPGQPLNSNSSQYGRQ 143