BLASTX nr result

ID: Acanthopanax23_contig00008821 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00008821
         (494 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017243963.1| PREDICTED: uncharacterized protein LOC108215...   120   6e-30
ref|XP_009630134.1| PREDICTED: uncharacterized protein ycf37 [Ni...    61   6e-08
ref|XP_019264802.1| PREDICTED: uncharacterized protein ycf37 [Ni...    56   3e-06

>ref|XP_017243963.1| PREDICTED: uncharacterized protein LOC108215873 [Daucus carota
           subsp. sativus]
          Length = 317

 Score =  120 bits (301), Expect = 6e-30
 Identities = 66/137 (48%), Positives = 87/137 (63%)
 Frame = +2

Query: 83  MLLHSTTLPPLQNFPHGSQNSVVNFIFATQKHPICLAVSEVQSCGSTLNNESRIPSKPKF 262
           MLLHS T  PL  +  GSQNS+VN IF T K+P+    +E QS GS L    RIP+KPKF
Sbjct: 1   MLLHSNTSTPLHIYSSGSQNSLVNLIFGTHKYPL----AEFQSYGSAL---PRIPNKPKF 53

Query: 263 RRHNLPLQIFGRQLALLPLLASKKCKEFSHTLLTGDDMMNPKGSPFCLSAFSCGSISWLX 442
           + H + LQI+GR+  +LPL+ SK+ ++   +LL  +D+MN KG    +SAFSCGS+SWL 
Sbjct: 54  KNHKISLQIYGRRFPVLPLMPSKRSED---SLLVDEDIMNLKGQLLGISAFSCGSVSWLA 110

Query: 443 XXXXXXXXXXXKIDPVY 493
                      +IDPVY
Sbjct: 111 TAQAAQASGYAQIDPVY 127


>ref|XP_009630134.1| PREDICTED: uncharacterized protein ycf37 [Nicotiana
           tomentosiformis]
 ref|XP_016465871.1| PREDICTED: uncharacterized protein ycf37-like [Nicotiana tabacum]
          Length = 318

 Score = 61.2 bits (147), Expect = 6e-08
 Identities = 47/137 (34%), Positives = 66/137 (48%)
 Frame = +2

Query: 83  MLLHSTTLPPLQNFPHGSQNSVVNFIFATQKHPICLAVSEVQSCGSTLNNESRIPSKPKF 262
           +++ ST  PP+Q         V   I A+ KH   LA+      GST +     P +P  
Sbjct: 2   LMIQSTISPPVQK-----TLLVPAQIAASGKHGCYLALHG--GFGST-SAYFHFPRRP-I 52

Query: 263 RRHNLPLQIFGRQLALLPLLASKKCKEFSHTLLTGDDMMNPKGSPFCLSAFSCGSISWLX 442
           +R+++ LQIF R++    LL  +K  E S  LL G D+   KG    LSAFSCGSI WL 
Sbjct: 53  KRNSVQLQIFARKVESFSLLVPEKVDESSEKLLNGGDITTSKGQVLSLSAFSCGSIFWLT 112

Query: 443 XXXXXXXXXXXKIDPVY 493
                      +++ VY
Sbjct: 113 SGQVASASESVRVNMVY 129


>ref|XP_019264802.1| PREDICTED: uncharacterized protein ycf37 [Nicotiana attenuata]
 gb|OIT36172.1| hypothetical protein A4A49_10381 [Nicotiana attenuata]
          Length = 315

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = +2

Query: 245 PSKPKFRRHNLPLQIFGRQLALLPLLASKKCKEFSHTLLTGDDMMNPKGSPFCLSAFSCG 424
           P +P  +R+++ LQIF R++    LL  +K  E S  LL G D+   KG    LSAFSCG
Sbjct: 45  PRRP-IKRNSVQLQIFARKVESFSLLVPEKDDESSEKLLNGGDITTSKGQFLSLSAFSCG 103

Query: 425 SISWLXXXXXXXXXXXXKIDPVY 493
           SI WL            +++ VY
Sbjct: 104 SIFWLTSGQVASASESVRVNMVY 126


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