BLASTX nr result
ID: Acanthopanax23_contig00008335
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00008335
(486 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022769332.1| LOW QUALITY PROTEIN: pentatricopeptide repea... 46 5e-09
ref|XP_021284334.1| pentatricopeptide repeat-containing protein ... 44 1e-07
ref|XP_021284335.1| pentatricopeptide repeat-containing protein ... 44 1e-07
ref|XP_017981535.1| PREDICTED: pentatricopeptide repeat-containi... 42 4e-07
ref|XP_007018003.2| PREDICTED: pentatricopeptide repeat-containi... 42 4e-07
gb|EOY15227.1| Tetratricopeptide repeat (TPR)-like superfamily p... 42 5e-07
gb|EOY15228.1| Tetratricopeptide repeat (TPR)-like superfamily p... 42 5e-07
gb|PIN21722.1| hypothetical protein CDL12_05577 [Handroanthus im... 41 8e-07
ref|XP_016707383.1| PREDICTED: pentatricopeptide repeat-containi... 42 3e-06
ref|XP_012464880.1| PREDICTED: pentatricopeptide repeat-containi... 42 3e-06
gb|KJB14291.1| hypothetical protein B456_002G118000 [Gossypium r... 42 3e-06
gb|KJB14289.1| hypothetical protein B456_002G118000 [Gossypium r... 42 3e-06
ref|XP_012464897.1| PREDICTED: pentatricopeptide repeat-containi... 42 3e-06
gb|KJB14290.1| hypothetical protein B456_002G118000 [Gossypium r... 42 3e-06
gb|KJB14288.1| hypothetical protein B456_002G118000 [Gossypium r... 42 3e-06
gb|KHF99794.1| hypothetical protein F383_16904 [Gossypium arboreum] 42 7e-06
ref|XP_017641638.1| PREDICTED: pentatricopeptide repeat-containi... 42 7e-06
ref|XP_016702907.1| PREDICTED: pentatricopeptide repeat-containi... 42 7e-06
ref|XP_017641640.1| PREDICTED: pentatricopeptide repeat-containi... 42 7e-06
>ref|XP_022769332.1| LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein
At1g76280 [Durio zibethinus]
Length = 819
Score = 45.8 bits (107), Expect(2) = 5e-09
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALR 431
RSI + KSK+ E G +NV+G +T +NG+ ++G G + + S++ +IVNALR
Sbjct: 9 RSIADTLCKSKSREHGRRNVIGRLGICRTLANMNGRVFLGYGEESITKSLQIQIVNALR 67
Score = 42.4 bits (98), Expect(2) = 5e-09
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 97 LNYCARSPDPLFVMETWR 114
>ref|XP_021284334.1| pentatricopeptide repeat-containing protein At1g76280 isoform X1
[Herrania umbratica]
Length = 819
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RSI +F KSK+ E G +NV G + +T T+NG +G G + +++ +IV+ALRL
Sbjct: 9 RSIADTFCKSKSREHGRRNVTGRLELCRTVATINGHVCLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 1e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>ref|XP_021284335.1| pentatricopeptide repeat-containing protein At1g76280 isoform X2
[Herrania umbratica]
Length = 817
Score = 43.9 bits (102), Expect(2) = 1e-07
Identities = 24/60 (40%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RSI +F KSK+ E G +NV G + +T T+NG +G G + +++ +IV+ALRL
Sbjct: 9 RSIADTFCKSKSREHGRRNVTGRLELCRTVATINGHVCLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 1e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>ref|XP_017981535.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X2 [Theobroma cacao]
Length = 819
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RSI + KSK+ E G +NV G + +T T+NG ++G G + +++ +IV+ALRL
Sbjct: 9 RSIADTLCKSKSREHGRRNVNGRLELCRTVATINGHVFLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>ref|XP_007018003.2| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X1 [Theobroma cacao]
Length = 671
Score = 42.4 bits (98), Expect(2) = 4e-07
Identities = 23/60 (38%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RSI + KSK+ E G +NV G + +T T+NG ++G G + +++ +IV+ALRL
Sbjct: 9 RSIADTLCKSKSREHGRRNVNGRLELCRTVATINGHVFLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 4e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>gb|EOY15227.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 814
Score = 42.0 bits (97), Expect(2) = 5e-07
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RS+ + KSK+ E G +NV G + +T T+NG ++G G + +++ +IV+ALRL
Sbjct: 9 RSVADTLCKSKSREHGRRNVNGRLELCRTVATINGHVFLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 5e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>gb|EOY15228.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 2, partial [Theobroma cacao]
Length = 664
Score = 42.0 bits (97), Expect(2) = 5e-07
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 255 RSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
RS+ + KSK+ E G +NV G + +T T+NG ++G G + +++ +IV+ALRL
Sbjct: 9 RSVADTLCKSKSREHGRRNVNGRLELCRTVATINGHVFLGYGEESRTKTLQLQIVDALRL 68
Score = 39.3 bits (90), Expect(2) = 5e-07
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCA+SPDPLF METWR
Sbjct: 97 LNYCAKSPDPLFFMETWR 114
>gb|PIN21722.1| hypothetical protein CDL12_05577 [Handroanthus impetiginosus]
Length = 413
Score = 41.2 bits (95), Expect(2) = 8e-07
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L+YCAR PDPLFVMETWR
Sbjct: 135 LQYCARKPDPLFVMETWR 152
Score = 39.3 bits (90), Expect(2) = 8e-07
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 237 RRSLFFRSIGHSFRKSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGW--KPVKGSVEA 410
R + + + SF + KA + G +N G +AL++F T NG W KP+ +++
Sbjct: 45 RLTFCLKCMKKSFLEGKASDIGQRNAAGFVEALRSFGTSNGY------WLSKPITRTMQE 98
Query: 411 EIVNALRL 434
EIVNAL L
Sbjct: 99 EIVNALYL 106
>ref|XP_016707383.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g76280-like isoform X1 [Gossypium hirsutum]
Length = 817
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>ref|XP_012464880.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X1 [Gossypium raimondii]
gb|KJB14287.1| hypothetical protein B456_002G118000 [Gossypium raimondii]
Length = 817
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>gb|KJB14291.1| hypothetical protein B456_002G118000 [Gossypium raimondii]
Length = 777
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>gb|KJB14289.1| hypothetical protein B456_002G118000 [Gossypium raimondii]
Length = 771
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>ref|XP_012464897.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X3 [Gossypium raimondii]
Length = 670
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>gb|KJB14290.1| hypothetical protein B456_002G118000 [Gossypium raimondii]
Length = 599
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>gb|KJB14288.1| hypothetical protein B456_002G118000 [Gossypium raimondii]
Length = 581
Score = 42.4 bits (98), Expect(2) = 3e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 36.2 bits (82), Expect(2) = 3e-06
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRLELCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>gb|KHF99794.1| hypothetical protein F383_16904 [Gossypium arboreum]
Length = 857
Score = 42.4 bits (98), Expect(2) = 7e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 35.0 bits (79), Expect(2) = 7e-06
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRVALCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>ref|XP_017641638.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X1 [Gossypium arboreum]
Length = 817
Score = 42.4 bits (98), Expect(2) = 7e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 35.0 bits (79), Expect(2) = 7e-06
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRVALCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>ref|XP_016702907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g76280-like isoform X1 [Gossypium hirsutum]
Length = 817
Score = 42.4 bits (98), Expect(2) = 7e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 35.0 bits (79), Expect(2) = 7e-06
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRVALCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67
>ref|XP_017641640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g76280
isoform X2 [Gossypium arboreum]
Length = 771
Score = 42.4 bits (98), Expect(2) = 7e-06
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 431 LRYCARSPDPLFVMETWR 484
L YCARSPDPLFVMETWR
Sbjct: 96 LNYCARSPDPLFVMETWR 113
Score = 35.0 bits (79), Expect(2) = 7e-06
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 279 KSKAPESGPKNVVGISQALQTFTTLNGQGYVGCGWKPVKGSVEAEIVNALRL 434
KS E G N + ++ T+NG ++G G +P+ S++ +IV+ALRL
Sbjct: 16 KSGELERGRGNFIRRVALCRSVATINGNVFLGYGGEPLTKSIQVQIVDALRL 67