BLASTX nr result

ID: Acanthopanax23_contig00008276 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00008276
         (497 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017252680.1| PREDICTED: replication factor C subunit 1 [D...    57   2e-06
gb|KZM94968.1| hypothetical protein DCAR_018210 [Daucus carota s...    57   2e-06

>ref|XP_017252680.1| PREDICTED: replication factor C subunit 1 [Daucus carota subsp.
            sativus]
 ref|XP_017252681.1| PREDICTED: replication factor C subunit 1 [Daucus carota subsp.
            sativus]
          Length = 995

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 46/97 (47%)
 Frame = -3

Query: 495  MLEPVDDGLKERVXXXXXXXXXXXXXXXXXXXXXXSRAVQLDLQNLNSKGIQVQMDLXXX 316
            MLEP DDGL+ +                        +AVQLDLQNL+SKGIQVQMDL   
Sbjct: 900  MLEPADDGLEGKADEAENEEGNSSDEELDDKNDGG-KAVQLDLQNLSSKGIQVQMDLKGA 958

Query: 315  XXXXXXXXXXXXXXXXGSEAVDKKGGRVSGAAAPKRK 205
                             SE V+K  GR SG+AA ++K
Sbjct: 959  EKTSGKKTGSGRGKRGASEVVEKGAGRGSGSAAKRKK 995


>gb|KZM94968.1| hypothetical protein DCAR_018210 [Daucus carota subsp. sativus]
          Length = 1012

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/97 (39%), Positives = 46/97 (47%)
 Frame = -3

Query: 495  MLEPVDDGLKERVXXXXXXXXXXXXXXXXXXXXXXSRAVQLDLQNLNSKGIQVQMDLXXX 316
            MLEP DDGL+ +                        +AVQLDLQNL+SKGIQVQMDL   
Sbjct: 917  MLEPADDGLEGKADEAENEEGNSSDEELDDKNDGG-KAVQLDLQNLSSKGIQVQMDLKGA 975

Query: 315  XXXXXXXXXXXXXXXXGSEAVDKKGGRVSGAAAPKRK 205
                             SE V+K  GR SG+AA ++K
Sbjct: 976  EKTSGKKTGSGRGKRGASEVVEKGAGRGSGSAAKRKK 1012


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