BLASTX nr result

ID: Acanthopanax23_contig00008257 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00008257
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017215631.1| PREDICTED: protein TIC 20-I, chloroplastic [...    67   1e-10

>ref|XP_017215631.1| PREDICTED: protein TIC 20-I, chloroplastic [Daucus carota subsp.
           sativus]
 gb|KZM88041.1| hypothetical protein DCAR_025116 [Daucus carota subsp. sativus]
          Length = 268

 Score = 67.4 bits (163), Expect = 1e-10
 Identities = 46/94 (48%), Positives = 55/94 (58%), Gaps = 8/94 (8%)
 Frame = +2

Query: 161 MIMNGYSLMSGGVCLR--TPKSYYSAPGCLARVNVKVASPSITSSWEPNRELKFGSFKGI 334
           MI+NG SL   G CL+  TPKS Y+A     R    V S SI +SW+ N+ L   S KG+
Sbjct: 1   MILNGCSLKPRGPCLKYNTPKSNYAAFATNVRA---VKSRSILNSWKSNQGLNSVSLKGV 57

Query: 335 QSLCLSAGSSPLLNGDV------FSRIPMRRRTV 418
           Q   L AGSSPLL GD+       S+IP RRRTV
Sbjct: 58  QFPHLFAGSSPLLKGDLCGLSDAISKIPARRRTV 91


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