BLASTX nr result

ID: Acanthopanax23_contig00008150 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00008150
         (541 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017258147.1| PREDICTED: pre-mRNA-processing protein 40A [...   104   1e-22
gb|KZM92572.1| hypothetical protein DCAR_020063 [Daucus carota s...   104   1e-22

>ref|XP_017258147.1| PREDICTED: pre-mRNA-processing protein 40A [Daucus carota subsp.
            sativus]
          Length = 1049

 Score =  104 bits (259), Expect = 1e-22
 Identities = 71/181 (39%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
 Frame = -1

Query: 541  RSIREESAAREIFEEYVARLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
            R+I+EES+AR+IFEE++ARLQ                                       
Sbjct: 822  RAIKEESSARQIFEEHIARLQEKARDKERKREEEKAKKEKEKEEKEKRKERERREKEKEK 881

Query: 361  XKD------IERPKNDEVESENLDVSDNYGXXXXXXXXXXXXXXXXXXXHSDAGXXXXXX 200
              +      +ER K D  E ENLD +DNY                    H+D        
Sbjct: 882  EHEKDNETSVERSK-DNNEGENLDAADNYVHKEDKKREKDRERKHRKRHHNDVNSEEDEK 940

Query: 199  XXXXXXSRRHGSEDEKEDFKKSRRHGSEDEKDDFKKSRRHDSEDEKEDLKKFRQHGSEEE 20
                  SRRHGSEDEKE  KKSRRHGS+DE DD KKSRRH SEDE ED KK R+HGS  +
Sbjct: 941  EDSYKKSRRHGSEDEKEHSKKSRRHGSDDENDDGKKSRRHGSEDEIEDTKKSRRHGSGRK 1000

Query: 19   K 17
            K
Sbjct: 1001 K 1001


>gb|KZM92572.1| hypothetical protein DCAR_020063 [Daucus carota subsp. sativus]
          Length = 1069

 Score =  104 bits (259), Expect = 1e-22
 Identities = 71/181 (39%), Positives = 84/181 (46%), Gaps = 6/181 (3%)
 Frame = -1

Query: 541  RSIREESAAREIFEEYVARLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 362
            R+I+EES+AR+IFEE++ARLQ                                       
Sbjct: 842  RAIKEESSARQIFEEHIARLQEKARDKERKREEEKAKKEKEKEEKEKRKERERREKEKEK 901

Query: 361  XKD------IERPKNDEVESENLDVSDNYGXXXXXXXXXXXXXXXXXXXHSDAGXXXXXX 200
              +      +ER K D  E ENLD +DNY                    H+D        
Sbjct: 902  EHEKDNETSVERSK-DNNEGENLDAADNYVHKEDKKREKDRERKHRKRHHNDVNSEEDEK 960

Query: 199  XXXXXXSRRHGSEDEKEDFKKSRRHGSEDEKDDFKKSRRHDSEDEKEDLKKFRQHGSEEE 20
                  SRRHGSEDEKE  KKSRRHGS+DE DD KKSRRH SEDE ED KK R+HGS  +
Sbjct: 961  EDSYKKSRRHGSEDEKEHSKKSRRHGSDDENDDGKKSRRHGSEDEIEDTKKSRRHGSGRK 1020

Query: 19   K 17
            K
Sbjct: 1021 K 1021


Top