BLASTX nr result
ID: Acanthopanax23_contig00008088
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00008088
(932 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023904095.1| cleavage and polyadenylation specificity fac... 240 1e-70
ref|XP_023904094.1| cleavage and polyadenylation specificity fac... 240 1e-70
gb|POE45696.1| cleavage and polyadenylation specificity factor s... 240 2e-70
gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara card... 238 7e-70
gb|KZM83603.1| hypothetical protein DCAR_031172 [Daucus carota s... 235 3e-69
ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation spec... 235 6e-69
ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation spec... 235 7e-69
ref|XP_021818512.1| cleavage and polyadenylation specificity fac... 231 3e-67
emb|CDP13267.1| unnamed protein product [Coffea canephora] 230 8e-67
ref|XP_020426099.1| cleavage and polyadenylation specificity fac... 230 9e-67
ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation spec... 229 2e-66
ref|XP_016514199.1| PREDICTED: RNA-binding protein 25-like [Nico... 218 3e-66
ref|XP_007044906.2| PREDICTED: cleavage and polyadenylation spec... 223 3e-64
gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma c... 223 3e-64
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec... 222 6e-64
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec... 222 7e-64
ref|XP_021901218.1| cleavage and polyadenylation specificity fac... 221 9e-64
dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus foll... 221 1e-63
ref|XP_022725765.1| cleavage and polyadenylation specificity fac... 221 2e-63
ref|XP_015572237.1| PREDICTED: heterogeneous nuclear ribonucleop... 221 2e-63
>ref|XP_023904095.1| cleavage and polyadenylation specificity factor subunit 6 isoform X2
[Quercus suber]
Length = 655
Score = 240 bits (612), Expect = 1e-70
Identities = 127/212 (59%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GMLP FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 445 GYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMPANGMGMMGSAGMDGHHAG 504
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW DTSM GWGGEEHG+RTR E +H+KG RS+AA SR+KERGSER
Sbjct: 505 MWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAA-SREKERGSER 563
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSGNS EH+ YREEKD YRDHR +ERDLGYEDDWDRGQ+
Sbjct: 564 DWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQSSS 623
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R MPEED RSRSRD DYGKRRRLPS+
Sbjct: 624 RPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 655
>ref|XP_023904094.1| cleavage and polyadenylation specificity factor subunit 6 isoform X1
[Quercus suber]
Length = 658
Score = 240 bits (612), Expect = 1e-70
Identities = 127/212 (59%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GMLP FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 448 GYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMPANGMGMMGSAGMDGHHAG 507
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW DTSM GWGGEEHG+RTR E +H+KG RS+AA SR+KERGSER
Sbjct: 508 MWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAA-SREKERGSER 566
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSGNS EH+ YREEKD YRDHR +ERDLGYEDDWDRGQ+
Sbjct: 567 DWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQSSS 626
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R MPEED RSRSRD DYGKRRRLPS+
Sbjct: 627 RPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 658
>gb|POE45696.1| cleavage and polyadenylation specificity factor subunit [Quercus
suber]
Length = 670
Score = 240 bits (612), Expect = 2e-70
Identities = 127/212 (59%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GMLP FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 460 GYGGFPGPAFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMPANGMGMMGSAGMDGHHAG 519
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW DTSM GWGGEEHG+RTR E +H+KG RS+AA SR+KERGSER
Sbjct: 520 MWNDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEGNHEKGARSSAA-SREKERGSER 578
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSGNS EH+ YREEKD YRDHR +ERDLGYEDDWDRGQ+
Sbjct: 579 DWSGNSERRHRDEREQDWDRSEREHREPRYREEKDSYRDHRPRERDLGYEDDWDRGQSSS 638
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R MPEED RSRSRD DYGKRRRLPS+
Sbjct: 639 RPRSRSRAMPEEDHRSRSRDVDYGKRRRLPSE 670
>gb|KVH88949.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 636
Score = 238 bits (606), Expect = 7e-70
Identities = 122/209 (58%), Positives = 134/209 (64%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPG F GM+P FP VNTMGLAGVAPHVNPAFF GP AG
Sbjct: 429 GYGGFPGSGFPGMMPQFPGVNTMGLAGVAPHVNPAFFGRGMGAGGMGMMGTSGMEGPQAG 488
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW DTSM GWGGEEHGQRTR E SHDKG RSNA SR+KERGSER
Sbjct: 489 MWGDTSMGGWGGEEHGQRTRESSYGGEDGASEYGYGEASHDKGARSNAV-SREKERGSER 547
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
+WSGNS ++KY+EEKD+YR+HRQKER+ GYEDDWDRGQ+
Sbjct: 548 EWSGNSEKRHRDDRDQDRERHDKDYKYKEEKDNYREHRQKERNAGYEDDWDRGQSSTRSR 607
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R MPE+D RSRSRDADYGKRRR+ SD
Sbjct: 608 SRSRAMPEDDHRSRSRDADYGKRRRMRSD 636
>gb|KZM83603.1| hypothetical protein DCAR_031172 [Daucus carota subsp. sativus]
Length = 610
Score = 235 bits (600), Expect = 3e-69
Identities = 121/209 (57%), Positives = 135/209 (64%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GM+PPFPNVN MG+AGV+PHVNPAFF GPH+G
Sbjct: 404 GYGGFPGPAFPGMMPPFPNVNAMGIAGVSPHVNPAFFGRGMAANGMGMMGNAGMDGPHSG 463
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW D++M GW GEEHGQRTR +P ++K RSN ASR+KERGSER
Sbjct: 464 MWNDSNMGGWAGEEHGQRTRESSYGGEDGGSEYGYGDPGNEKSTRSN-PASREKERGSER 522
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
DWSGNS EH+YREEKDDYR+HRQK+RD Y+DD DRGQA
Sbjct: 523 DWSGNSEKRHRDERDQDRDRYDREHRYREEKDDYREHRQKDRD-SYKDDGDRGQASSRSR 581
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
RV PEED RSRSRDADYGKRRRLPSD
Sbjct: 582 SRSRVAPEEDHRSRSRDADYGKRRRLPSD 610
>ref|XP_017226448.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Daucus carota subsp. sativus]
Length = 645
Score = 235 bits (600), Expect = 6e-69
Identities = 121/209 (57%), Positives = 135/209 (64%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GM+PPFPNVN MG+AGV+PHVNPAFF GPH+G
Sbjct: 439 GYGGFPGPAFPGMMPPFPNVNAMGIAGVSPHVNPAFFGRGMAANGMGMMGNAGMDGPHSG 498
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW D++M GW GEEHGQRTR +P ++K RSN ASR+KERGSER
Sbjct: 499 MWNDSNMGGWAGEEHGQRTRESSYGGEDGGSEYGYGDPGNEKSTRSN-PASREKERGSER 557
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
DWSGNS EH+YREEKDDYR+HRQK+RD Y+DD DRGQA
Sbjct: 558 DWSGNSEKRHRDERDQDRDRYDREHRYREEKDDYREHRQKDRD-SYKDDGDRGQASSRSR 616
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
RV PEED RSRSRDADYGKRRRLPSD
Sbjct: 617 SRSRVAPEEDHRSRSRDADYGKRRRLPSD 645
>ref|XP_018820439.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
ref|XP_018820440.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
ref|XP_018820442.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 [Juglans regia]
Length = 652
Score = 235 bits (600), Expect = 7e-69
Identities = 121/212 (57%), Positives = 139/212 (65%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GM+P FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 442 GYGGFPGPAFPGMIPSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGAAGMEGHHAG 501
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW +T+M GWGGEEHG+RTR + +H+KGVRS+AA SR+KERGSER
Sbjct: 502 MWNETNMGGWGGEEHGRRTRESSYGGDDGASEYGYGDANHEKGVRSSAA-SREKERGSER 560
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSG+S EH+ YREEKD+YRDHRQ+ERD+GYEDDWDRGQ+
Sbjct: 561 DWSGSSERRPRDDREQDWDRPEREHRDRRYREEKDNYRDHRQRERDVGYEDDWDRGQSSS 620
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R +PEED +SRSRD DYGKRRRLPS+
Sbjct: 621 RPRSRSRAIPEEDHKSRSRDGDYGKRRRLPSE 652
>ref|XP_021818512.1| cleavage and polyadenylation specificity factor subunit 6 isoform X1
[Prunus avium]
ref|XP_021818513.1| cleavage and polyadenylation specificity factor subunit 6 isoform X2
[Prunus avium]
Length = 660
Score = 231 bits (589), Expect = 3e-67
Identities = 120/213 (56%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GML FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 449 GYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAG 508
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW D SM GWGGEEHG+RTR E +H+KG RSNA SR++ERGSER
Sbjct: 509 MWNDPSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAP-SRERERGSER 567
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXE----HKYREEKDDYRDHRQKERDLGYEDDWDRGQAX 142
DWSGNS H+Y+EEKD YRDHRQ+ERD+GYEDDWDRGQ+
Sbjct: 568 DWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSS 627
Query: 141 XXXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
+ MPE+D RSRSRD DYGKRRRLPS+
Sbjct: 628 SRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 660
>emb|CDP13267.1| unnamed protein product [Coffea canephora]
Length = 655
Score = 230 bits (586), Expect = 8e-67
Identities = 124/209 (59%), Positives = 135/209 (64%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGF GPAF GM+PPFP VN MGLAGVAPHVNPAFF GPHAG
Sbjct: 450 GYGGFSGPAFPGMIPPFPAVNHMGLAGVAPHVNPAFFGRGMAANGMGMMGTGGMDGPHAG 509
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTDTSM GWGGEEHG+RTR E SHDKGVRS +AASR+KERGSER
Sbjct: 510 MWTDTSM-GWGGEEHGRRTRESSYGGEDNASEYGYGEASHDKGVRS-SAASREKERGSER 567
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
DWSG+S +H+YREEKD YR++R KERD GYEDD+DRGQ
Sbjct: 568 DWSGSSDRRHRDEREHDRDRYDRDHRYREEKDSYREYRHKERDPGYEDDYDRGQPSRSRS 627
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
V PEE RSRSRDADYGKRRRLPS+
Sbjct: 628 RSRAV-PEEHHRSRSRDADYGKRRRLPSE 655
>ref|XP_020426099.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426104.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
ref|XP_020426109.1| cleavage and polyadenylation specificity factor subunit 6 [Prunus
persica]
gb|ONI30252.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30253.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30254.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30255.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30256.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
gb|ONI30257.1| hypothetical protein PRUPE_1G240200 [Prunus persica]
Length = 660
Score = 230 bits (586), Expect = 9e-67
Identities = 119/213 (55%), Positives = 133/213 (62%), Gaps = 4/213 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAF GML FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 449 GYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGRGMATNGMGMMGSSGMDGHHAG 508
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW D SM GWGG+EHG+RTR E +H+KG RSNA SR++ERGSER
Sbjct: 509 MWNDPSMGGWGGDEHGRRTRESSYGGDDGASEYGYGEANHEKGGRSNAP-SRERERGSER 567
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXE----HKYREEKDDYRDHRQKERDLGYEDDWDRGQAX 142
DWSGNS H+Y+EEKD YRDHRQ+ERD+GYEDDWDRGQ+
Sbjct: 568 DWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRDHRQRERDVGYEDDWDRGQSS 627
Query: 141 XXXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
+ MPE+D RSRSRD DYGKRRRLPS+
Sbjct: 628 SRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 660
>ref|XP_015894525.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Ziziphus jujuba]
Length = 659
Score = 229 bits (584), Expect = 2e-66
Identities = 125/213 (58%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGPAFHGMLP FP VNTMGLAGVAPHVNPAFF G HAG
Sbjct: 448 GYGGFPGPAFHGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMASNGMGMMGSSLMDGHHAG 507
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTD SM GW GEEHG+R R E +KGVRS +AASR++ERGSER
Sbjct: 508 MWTDPSMGGWSGEEHGRRMRESSYGGDDGASEYGYGEADQEKGVRS-SAASRERERGSER 566
Query: 309 DWSGNS---XXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSGNS EH+YREEKD +RDHRQ+ERDL YEDDWDRGQ
Sbjct: 567 DWSGNSERRHRDERDQDWDRSEKEHREHRYREEKDGHRDHRQRERDLDYEDDWDRGQPSS 626
Query: 138 XXXXXXRVMPEED-QRSRSRDADYGKRRRLPSD 43
RVMPEED RSRSRD DYGKRRRLPS+
Sbjct: 627 RPRSRSRVMPEEDHHRSRSRDLDYGKRRRLPSE 659
>ref|XP_016514199.1| PREDICTED: RNA-binding protein 25-like [Nicotiana tabacum]
Length = 264
Score = 218 bits (554), Expect = 3e-66
Identities = 115/209 (55%), Positives = 128/209 (61%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGF GPAF GM+P FP VN MGL GVAPHVNPAFF GPH G
Sbjct: 57 GYGGFSGPAFPGMIPQFPAVNPMGLPGVAPHVNPAFFGRGMSANGMGMMGNAGMDGPHPG 116
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTDTS GWGGEEHG+RTR E SHDKG RS+A SR+KERGSER
Sbjct: 117 MWTDTSGGGWGGEEHGRRTRESSYGGEDNASEYGYGEVSHDKGARSSAV-SREKERGSER 175
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
DWSGNS EH+Y+EE+D YRD+RQKER+ YEDD+DRGQ+
Sbjct: 176 DWSGNSERRHRDEREHDRERYDREHRYKEERDGYRDYRQKERESEYEDDYDRGQSSSRSR 235
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R EED RSRSRD +YGKRRR PS+
Sbjct: 236 SRSRAAQEEDHRSRSRDTNYGKRRRAPSE 264
>ref|XP_007044906.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Theobroma cacao]
ref|XP_017971546.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Theobroma cacao]
ref|XP_017971547.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Theobroma cacao]
ref|XP_017971548.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Theobroma cacao]
ref|XP_007044905.2| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
[Theobroma cacao]
Length = 652
Score = 223 bits (568), Expect = 3e-64
Identities = 114/212 (53%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGP F GMLP FP VNTMGLAGVAPHVNPAFF GPHAG
Sbjct: 443 GYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAG 502
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTD SM GWGG+EHG+RTR + +H+KG ++ ASR+KER SER
Sbjct: 503 MWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG--RSSGASREKERVSER 560
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
+WSGNS EH+ YREEKD YR+HR +ERDL Y+DDWDRGQ+
Sbjct: 561 EWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSS 620
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
MPEE+ RSRSRD DYGK+RRLPS+
Sbjct: 621 RSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>gb|EOY00736.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY00737.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gb|EOY00738.1| RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 652
Score = 223 bits (568), Expect = 3e-64
Identities = 114/212 (53%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGP F GMLP FP VNTMGLAGVAPHVNPAFF GPHAG
Sbjct: 443 GYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGRGMAPNGMGMMGASGMDGPHAG 502
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTD SM GWGG+EHG+RTR + +H+KG ++ ASR+KER SER
Sbjct: 503 MWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDANHEKG--RSSGASREKERVSER 560
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
+WSGNS EH+ YREEKD YR+HR +ERDL Y+DDWDRGQ+
Sbjct: 561 EWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSS 620
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
MPEE+ RSRSRD DYGK+RRLPS+
Sbjct: 621 RSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652
>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650883.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_010650886.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
ref|XP_019075332.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
CG7185 isoform X2 [Vitis vinifera]
Length = 650
Score = 222 bits (566), Expect = 6e-64
Identities = 117/208 (56%), Positives = 129/208 (62%)
Frame = -3
Query: 666 YGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAGM 487
YGGF G AF GM+P FP VNTMGLAGVAPHVNPAFF G HAGM
Sbjct: 444 YGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGM 503
Query: 486 WTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSERD 307
WTDTSM GWGGEEHG+RTR E +H+K RSN A SR+KERGSERD
Sbjct: 504 WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTA-SREKERGSERD 562
Query: 306 WSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXXX 127
WSGNS +H+YREEKD YRDHRQ+ERD EDDWDRGQ+
Sbjct: 563 WSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRS 622
Query: 126 XXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R + +ED RSRSRD DYGKRRRLPS+
Sbjct: 623 RSRAVADEDHRSRSRDGDYGKRRRLPSE 650
>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
isoform X1 [Vitis vinifera]
Length = 656
Score = 222 bits (566), Expect = 7e-64
Identities = 117/208 (56%), Positives = 129/208 (62%)
Frame = -3
Query: 666 YGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAGM 487
YGGF G AF GM+P FP VNTMGLAGVAPHVNPAFF G HAGM
Sbjct: 450 YGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGRGMAANGMGMMGATGMDGHHAGM 509
Query: 486 WTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSERD 307
WTDTSM GWGGEEHG+RTR E +H+K RSN A SR+KERGSERD
Sbjct: 510 WTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVNHEKVGRSNTA-SREKERGSERD 568
Query: 306 WSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXXX 127
WSGNS +H+YREEKD YRDHRQ+ERD EDDWDRGQ+
Sbjct: 569 WSGNSERRHRDEREQDWERSDKDHRYREEKDGYRDHRQRERDFNNEDDWDRGQSSSRSRS 628
Query: 126 XXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R + +ED RSRSRD DYGKRRRLPS+
Sbjct: 629 RSRAVADEDHRSRSRDGDYGKRRRLPSE 656
>ref|XP_021901218.1| cleavage and polyadenylation specificity factor subunit CG7185
[Carica papaya]
Length = 636
Score = 221 bits (564), Expect = 9e-64
Identities = 113/209 (54%), Positives = 129/209 (61%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYG F GP+F GMLP FP VN MGLAGVAPH+NPAFF GPHAG
Sbjct: 429 GYGAFSGPSFPGMLPSFPGVNAMGLAGVAPHINPAFFGRGMGANGMGMMGPSGMDGPHAG 488
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
+WTD SM GWGGEEHG+RTR E +H+KG RS+AA SR+KER SER
Sbjct: 489 IWTDPSMGGWGGEEHGRRTRESSYGGEDGASDYGYGEANHEKGGRSSAA-SREKERASER 547
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHKYREEKDDYRDHRQKERDLGYEDDWDRGQAXXXXX 130
DWSG++ EH+YR EKD Y DHRQ+ERD YEDDWDRGQ
Sbjct: 548 DWSGSNDRRHHDERGQDWDRSEREHRYRGEKDSYHDHRQRERDSAYEDDWDRGQTSSRSR 607
Query: 129 XXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R MPE+D +SRSR+ DYGKRRRLPS+
Sbjct: 608 SRSRTMPEDDHKSRSREGDYGKRRRLPSE 636
>dbj|GAV59792.1| RRM_1 domain-containing protein [Cephalotus follicularis]
Length = 658
Score = 221 bits (564), Expect = 1e-63
Identities = 117/212 (55%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGF GP F GMLP FP VN MG AGVAPHVNPAFF GPHAG
Sbjct: 448 GYGGFSGPGFPGMLPSFPAVNAMGFAGVAPHVNPAFFGRGMAANGMGMMGSSGMDGPHAG 507
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MWTDTSM GWGGEEHG+RTR E +++KG RS+ A S++KER SER
Sbjct: 508 MWTDTSMGGWGGEEHGRRTRESSYGGDDGASEYGYGEANNEKGARSSGA-SQEKERVSER 566
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXE---HKYREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSG + E H+YREEKD YRDHRQ+ERD GYEDDWDRG +
Sbjct: 567 DWSGTTERRHREERVQDWDRSEREQREHRYREEKDSYRDHRQRERDSGYEDDWDRGHSSS 626
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R +PEE+ RSRSRDADYGKRRRLPS+
Sbjct: 627 RSRSRSRAVPEEEHRSRSRDADYGKRRRLPSE 658
>ref|XP_022725765.1| cleavage and polyadenylation specificity factor subunit 6-like [Durio
zibethinus]
ref|XP_022725766.1| cleavage and polyadenylation specificity factor subunit 6-like [Durio
zibethinus]
ref|XP_022725767.1| cleavage and polyadenylation specificity factor subunit 6-like [Durio
zibethinus]
ref|XP_022725768.1| cleavage and polyadenylation specificity factor subunit 6-like [Durio
zibethinus]
ref|XP_022725769.1| cleavage and polyadenylation specificity factor subunit 6-like [Durio
zibethinus]
Length = 653
Score = 221 bits (563), Expect = 2e-63
Identities = 112/212 (52%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGFPGP F GMLP FP VNTMGLAGVAPHVNPAFF GPH G
Sbjct: 444 GYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFARGMAPNGMGMMGSSGMDGPHTG 503
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
+WTDTSM GWGG+EHG RTR + +H+KG ++ ASR+KER S+R
Sbjct: 504 LWTDTSMGGWGGDEHGHRTRESSYGGEDGASEYGYGDANHEKG--RSSGASREKERVSDR 561
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
+WSGNS EH+ YREEKD YR+HR +ERDL Y+DDWDRGQ+
Sbjct: 562 EWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREHRHRERDLDYDDDWDRGQSSS 621
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
MPEE++RSRSRD DYGK+RRLPS+
Sbjct: 622 RSRTRSHAMPEEERRSRSRDVDYGKKRRLPSE 653
>ref|XP_015572237.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
[Ricinus communis]
gb|EEF47594.1| RNA binding protein, putative [Ricinus communis]
Length = 644
Score = 221 bits (562), Expect = 2e-63
Identities = 121/212 (57%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Frame = -3
Query: 669 GYGGFPGPAFHGMLPPFPNVNTMGLAGVAPHVNPAFFXXXXXXXXXXXXXXXXXXGPHAG 490
GYGGF GP F GMLP FP VN MGLAGVAPHVNPAFF GP+AG
Sbjct: 435 GYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGRGMAPNGMGMMGPSGMDGPNAG 494
Query: 489 MWTDTSMAGWGGEEHGQRTRXXXXXXXXXXXXXXXXEPSHDKGVRSNAAASRDKERGSER 310
MW+DTSM GWG EE G+RTR E +H+KG RS+AA SR+KER SER
Sbjct: 495 MWSDTSMGGWG-EEPGRRTRESSYGGDDGASEYGYGEVNHEKGARSSAA-SREKERASER 552
Query: 309 DWSGNSXXXXXXXXXXXXXXXXXEHK---YREEKDDYRDHRQKERDLGYEDDWDRGQAXX 139
DWSGNS EHK YREEK+ YRDHRQ+ERD GYEDDWDRGQ+
Sbjct: 553 DWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDHRQRERDSGYEDDWDRGQSSS 612
Query: 138 XXXXXXRVMPEEDQRSRSRDADYGKRRRLPSD 43
R +PEED RSRSRDADYGKRRRLPS+
Sbjct: 613 RSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644