BLASTX nr result

ID: Acanthopanax23_contig00007889 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00007889
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017236152.1| PREDICTED: ion channel DMI1-like [Daucus car...    55   3e-08
emb|CDO97603.1| unnamed protein product [Coffea canephora]             46   9e-06

>ref|XP_017236152.1| PREDICTED: ion channel DMI1-like [Daucus carota subsp. sativus]
 gb|KZN05838.1| hypothetical protein DCAR_006675 [Daucus carota subsp. sativus]
          Length = 911

 Score = 55.1 bits (131), Expect(2) = 3e-08
 Identities = 25/33 (75%), Positives = 28/33 (84%)
 Frame = +2

Query: 224 IFFSDQRFSVSNRNYIYPSFLGPYCFRTRVTVK 322
           I  SDQRF VS+R+Y+YPSFLGPY  RTRVTVK
Sbjct: 47  ISLSDQRFGVSDRDYVYPSFLGPYSSRTRVTVK 79



 Score = 30.4 bits (67), Expect(2) = 3e-08
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 111 DSQPPHFSGPLFSVVHRFTSRP 176
           D  PPHF GPLF  V R  + P
Sbjct: 22  DPPPPHFPGPLFPAVRRTAASP 43


>emb|CDO97603.1| unnamed protein product [Coffea canephora]
          Length = 956

 Score = 46.2 bits (108), Expect(2) = 9e-06
 Identities = 20/37 (54%), Positives = 26/37 (70%)
 Frame = +2

Query: 233 SDQRFSVSNRNYIYPSFLGPYCFRTRVTVKPLLQINN 343
           SDQ F+ S+R+Y+YPSFLGPY  R+RV  K     +N
Sbjct: 85  SDQAFNFSDRDYVYPSFLGPYATRSRVAAKSAAHNSN 121



 Score = 30.8 bits (68), Expect(2) = 9e-06
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 105 AEDSQPPHFSGPLFSVVHRFTSRP 176
           +++++ PHF GPLF  V R T+ P
Sbjct: 40  SDETRTPHFPGPLFPAVRRVTTSP 63


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