BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00006685
         (1181 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handr...    58   7e-08
gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota s...    56   1e-06

>gb|PIN11781.1| RNA binding protein (contains RRM repeats) [Handroanthus
            impetiginosus]
          Length = 316

 Score = 57.8 bits (138), Expect(2) = 7e-08
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = -2

Query: 1165 IFKKPIWEKEGFWPPSCCPWCKWSSTTYDLPVAGRGCTLFSM 1040
            IFK+ + EKEGF  PS CP C+WSS   DLPVAGRGC L  M
Sbjct: 251  IFKESVREKEGFDLPSRCPRCEWSSAFNDLPVAGRGCILLLM 292



 Score = 28.9 bits (63), Expect(2) = 7e-08
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -3

Query: 1011 RMHHAAVACIH 979
            RMHHAAVACIH
Sbjct: 299  RMHHAAVACIH 309


>gb|KZN06830.1| hypothetical protein DCAR_007667 [Daucus carota subsp. sativus]
          Length = 84

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 35/63 (55%), Positives = 37/63 (58%)
 Frame = +3

Query: 978  NGCMQQLHDASYEVVVCIGQSIENRVHPLPATGRS*VVEXXXXXXXXXXXXNPSFSQMGF 1157
            N CM        +VVVCI  SIENRVHPLPATGRS VVE            N SFSQMG 
Sbjct: 5    NSCMMH----PIKVVVCIDHSIENRVHPLPATGRSRVVE-LHSGLGPQSGQNLSFSQMGS 59

Query: 1158 LNI 1166
            LN+
Sbjct: 60   LNM 62