BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00006644
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNS22111.1| hypothetical protein POPTR_T171800v3 [Populus tri...    55   4e-06

>gb|PNS22111.1| hypothetical protein POPTR_T171800v3 [Populus trichocarpa]
          Length = 294

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 43/116 (37%), Positives = 55/116 (47%), Gaps = 9/116 (7%)
 Frame = +3

Query: 84  TNHSPNREIITHTLTVSSIAMANMIMASSKPLIT--SSSLP-------QIPKLALPQIXX 236
           T+H+P ++  T    + S AMANMIM +SKPLIT  SSSLP       QIP+L+ P++  
Sbjct: 56  TSHTP-KDTTTPNFGLQSSAMANMIMGTSKPLITLSSSSLPTNSKPKLQIPRLSFPEL-- 112

Query: 237 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEFEKAQLFDFDLTLPIMM 404
                                                EE EKA LFDF+LTLPI+M
Sbjct: 113 --LKITIPLLLSLSTSSLKSLSLIAATSLTFAPPSLAEEIEKAALFDFNLTLPIIM 166