BLASTX nr result
ID: Acanthopanax23_contig00006555
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00006555
(674 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_018839500.1| PREDICTED: polyadenylation and cleavage fact... 118 6e-27
ref|XP_018839499.1| PREDICTED: polyadenylation and cleavage fact... 118 6e-27
emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera] 116 4e-26
ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage fact... 116 4e-26
dbj|GAV80039.1| CTD_bind domain-containing protein [Cephalotus f... 114 3e-25
gb|EYU38613.1| hypothetical protein MIMGU_mgv1a002674mg [Erythra... 112 5e-25
ref|XP_019055842.1| PREDICTED: T-box transcription factor TBX6-l... 112 6e-25
ref|XP_012836098.1| PREDICTED: polyadenylation and cleavage fact... 112 6e-25
ref|XP_010243716.1| PREDICTED: polyadenylation and cleavage fact... 112 6e-25
ref|XP_010243711.1| PREDICTED: polyadenylation and cleavage fact... 112 6e-25
ref|XP_019055841.1| PREDICTED: polyadenylation and cleavage fact... 112 6e-25
ref|XP_017258098.1| PREDICTED: uncharacterized protein LOC108227... 112 1e-24
gb|KZM91858.1| hypothetical protein DCAR_020777 [Daucus carota s... 111 2e-24
ref|XP_015898702.1| PREDICTED: uncharacterized protein LOC107432... 110 3e-24
ref|XP_015898701.1| PREDICTED: uncharacterized protein LOC107432... 110 3e-24
gb|POE58102.1| isoform 2 of polyadenylation and cleavage factor ... 110 4e-24
ref|XP_023894769.1| LOW QUALITY PROTEIN: polyadenylation and cle... 110 4e-24
gb|POF19617.1| polyadenylation and cleavage factor like 4 [Querc... 107 4e-24
ref|XP_023905498.1| polyadenylation and cleavage factor homolog ... 107 5e-24
gb|KDO61035.1| hypothetical protein CISIN_1g001465mg [Citrus sin... 109 8e-24
>ref|XP_018839500.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Juglans regia]
Length = 1053
Score = 118 bits (296), Expect = 6e-27
Identities = 55/86 (63%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVP 483
GE++VPADE C CVLCG++FEDFY QERD+WMFKGAVY+T+++ G+ ++D AA+ P
Sbjct: 967 GERLVPADETQCACVLCGQVFEDFYCQERDEWMFKGAVYMTISSCAGEIEISNDNAAKGP 1026
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVHA+CISESSI DLGL+ +K+EKD
Sbjct: 1027 IVHANCISESSIHDLGLASGIKMEKD 1052
>ref|XP_018839499.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Juglans regia]
Length = 1055
Score = 118 bits (296), Expect = 6e-27
Identities = 55/86 (63%), Positives = 72/86 (83%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVP 483
GE++VPADE C CVLCG++FEDFY QERD+WMFKGAVY+T+++ G+ ++D AA+ P
Sbjct: 969 GERLVPADETQCACVLCGQVFEDFYCQERDEWMFKGAVYMTISSCAGEIEISNDNAAKGP 1028
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVHA+CISESSI DLGL+ +K+EKD
Sbjct: 1029 IVHANCISESSIHDLGLASGIKMEKD 1054
>emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera]
Length = 1049
Score = 116 bits (290), Expect = 4e-26
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATNGKNGRASDVAAQVPIV 477
EQMVPADEN CVCVLCGE+FEDFY QE D+WMF+GAV +T+ + G + Q PIV
Sbjct: 968 EQMVPADENQCVCVLCGEVFEDFYSQEMDKWMFRGAVKMTVPSQGGELGTKN---QGPIV 1024
Query: 476 HADCISESSIRDLGLSKDVKVEKD 405
HADCI+ESS+ DLGL+ D+KVEKD
Sbjct: 1025 HADCITESSVHDLGLACDIKVEKD 1048
>ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
vinifera]
Length = 1086
Score = 116 bits (290), Expect = 4e-26
Identities = 55/84 (65%), Positives = 66/84 (78%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATNGKNGRASDVAAQVPIV 477
EQMVPADEN CVCVLCGE+FEDFY QE D+WMF+GAV +T+ + G + Q PIV
Sbjct: 1005 EQMVPADENQCVCVLCGEVFEDFYSQEMDKWMFRGAVKMTVPSQGGELGTKN---QGPIV 1061
Query: 476 HADCISESSIRDLGLSKDVKVEKD 405
HADCI+ESS+ DLGL+ D+KVEKD
Sbjct: 1062 HADCITESSVHDLGLACDIKVEKD 1085
>dbj|GAV80039.1| CTD_bind domain-containing protein [Cephalotus follicularis]
Length = 1136
Score = 114 bits (284), Expect = 3e-25
Identities = 51/82 (62%), Positives = 66/82 (80%), Gaps = 1/82 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTL-ATNGKNGRASDVAAQVP 483
GE MVPADEN CVCVLCG+LFED+Y +E D+WMFKGAV +T+ + +GK G A++ A+ P
Sbjct: 1055 GESMVPADENQCVCVLCGDLFEDYYSEESDEWMFKGAVCMTIPSVDGKMGTATETVAKGP 1114
Query: 482 IVHADCISESSIRDLGLSKDVK 417
IVH +CISESS+ DLGL+ +K
Sbjct: 1115 IVHVNCISESSVHDLGLAGGIK 1136
>gb|EYU38613.1| hypothetical protein MIMGU_mgv1a002674mg [Erythranthe guttata]
Length = 648
Score = 112 bits (281), Expect = 5e-25
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATNGKNGR---ASDVAAQV 486
EQMVPADE+ C C+LCGELFEDFY QERD+WM+K AVYLT+ ++ R ++D A
Sbjct: 561 EQMVPADESQCACILCGELFEDFYSQERDEWMYKAAVYLTIPSSESVERIATSNDSAILG 620
Query: 485 PIVHADCISESSIRDLGLSKDVKVEKD 405
PIVHA+C+S+ SI DLGL DVK+E D
Sbjct: 621 PIVHANCVSKDSIHDLGLVSDVKLEND 647
>ref|XP_019055842.1| PREDICTED: T-box transcription factor TBX6-like isoform X2 [Nelumbo
nucifera]
Length = 864
Score = 112 bits (281), Expect = 6e-25
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVP 483
GE M+PADE+ C+C LCGELFEDFY ERD+WMFKGAVY+T+ G G AAQ P
Sbjct: 780 GELMIPADESQCICALCGELFEDFYSHERDEWMFKGAVYMTIPVGEGNIGTTDKSAAQGP 839
Query: 482 IVHADCISESSIRDLGLSKDVKVE 411
IVH++CIS+SS+ DLGL + +K E
Sbjct: 840 IVHSNCISQSSVYDLGLMEHIKTE 863
>ref|XP_012836098.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Erythranthe guttata]
Length = 1010
Score = 112 bits (281), Expect = 6e-25
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATNGKNGR---ASDVAAQV 486
EQMVPADE+ C C+LCGELFEDFY QERD+WM+K AVYLT+ ++ R ++D A
Sbjct: 923 EQMVPADESQCACILCGELFEDFYSQERDEWMYKAAVYLTIPSSESVERIATSNDSAILG 982
Query: 485 PIVHADCISESSIRDLGLSKDVKVEKD 405
PIVHA+C+S+ SI DLGL DVK+E D
Sbjct: 983 PIVHANCVSKDSIHDLGLVSDVKLEND 1009
>ref|XP_010243716.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X2 [Nelumbo nucifera]
Length = 1020
Score = 112 bits (281), Expect = 6e-25
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTL-ATNGKNGRASDVAAQVP 483
GE M+PADE+ C+C LCGELFEDFY ERD+WMFKGAVY+T+ G+ G AAQ P
Sbjct: 934 GEPMIPADESQCICALCGELFEDFYSYERDEWMFKGAVYMTIPVREGEIGTTDKCAAQGP 993
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVH CIS SS+ +LGLS +K+E D
Sbjct: 994 IVHCKCISRSSVYELGLSAHIKMEID 1019
>ref|XP_010243711.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Nelumbo nucifera]
Length = 1054
Score = 112 bits (281), Expect = 6e-25
Identities = 52/86 (60%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTL-ATNGKNGRASDVAAQVP 483
GE M+PADE+ C+C LCGELFEDFY ERD+WMFKGAVY+T+ G+ G AAQ P
Sbjct: 968 GEPMIPADESQCICALCGELFEDFYSYERDEWMFKGAVYMTIPVREGEIGTTDKCAAQGP 1027
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVH CIS SS+ +LGLS +K+E D
Sbjct: 1028 IVHCKCISRSSVYELGLSAHIKMEID 1053
>ref|XP_019055841.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Nelumbo nucifera]
Length = 1075
Score = 112 bits (281), Expect = 6e-25
Identities = 51/84 (60%), Positives = 63/84 (75%), Gaps = 1/84 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVP 483
GE M+PADE+ C+C LCGELFEDFY ERD+WMFKGAVY+T+ G G AAQ P
Sbjct: 991 GELMIPADESQCICALCGELFEDFYSHERDEWMFKGAVYMTIPVGEGNIGTTDKSAAQGP 1050
Query: 482 IVHADCISESSIRDLGLSKDVKVE 411
IVH++CIS+SS+ DLGL + +K E
Sbjct: 1051 IVHSNCISQSSVYDLGLMEHIKTE 1074
>ref|XP_017258098.1| PREDICTED: uncharacterized protein LOC108227463 [Daucus carota subsp.
sativus]
Length = 1038
Score = 112 bits (279), Expect = 1e-24
Identities = 58/93 (62%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
Frame = -1
Query: 671 LVNGGEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLA-----TNGKNGRA 507
L N G MVPADEN CVCVLCGELFED Y++ DQWMFK AVYLTL+ T+ +
Sbjct: 944 LENDGLLMVPADENQCVCVLCGELFEDIYNKNMDQWMFKEAVYLTLSAQTVVTSLTGEKG 1003
Query: 506 SDVAAQVPIVHADCISESSIRDLGLSKDVKVEK 408
V A+ PIVHA+CISESS+RDL L+ DVKVE+
Sbjct: 1004 PIVHAKGPIVHANCISESSLRDLDLANDVKVER 1036
>gb|KZM91858.1| hypothetical protein DCAR_020777 [Daucus carota subsp. sativus]
Length = 1334
Score = 111 bits (278), Expect = 2e-24
Identities = 61/103 (59%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Frame = -1
Query: 671 LVNGGEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLA-----TNGKNGRA 507
L N G MVPADEN CVCVLCGELFED Y++ DQWMFK AVYLTL+ T+ +
Sbjct: 942 LENDGLLMVPADENQCVCVLCGELFEDIYNKNMDQWMFKEAVYLTLSAQTVVTSLTGEKG 1001
Query: 506 SDVAAQVPIVHADCISESSIRDLGLSKDVKVEKDA*YLRCDSD 378
V A+ PIVHA+CISESS+RDL L+ DVKV K+ RC S+
Sbjct: 1002 PIVHAKGPIVHANCISESSLRDLDLANDVKVMKN--LTRCYSE 1042
>ref|XP_015898702.1| PREDICTED: uncharacterized protein LOC107432146 isoform X2 [Ziziphus
jujuba]
ref|XP_015898703.1| PREDICTED: uncharacterized protein LOC107432146 isoform X3 [Ziziphus
jujuba]
Length = 1119
Score = 110 bits (276), Expect = 3e-24
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATN-GKNGRASDVAAQVP 483
GE MVPADE+ C CVLC E+FEDFY QERD+WMF GAV++ + + G+ G ++ A+ P
Sbjct: 1033 GEPMVPADESQCACVLCCEIFEDFYCQERDEWMFNGAVHMVIPSGAGEEGSKGEIVAKGP 1092
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVHA C+SESS+ DLGL+ +K E+D
Sbjct: 1093 IVHAKCLSESSLHDLGLASSIKTEED 1118
>ref|XP_015898701.1| PREDICTED: uncharacterized protein LOC107432146 isoform X1 [Ziziphus
jujuba]
Length = 1139
Score = 110 bits (276), Expect = 3e-24
Identities = 49/86 (56%), Positives = 65/86 (75%), Gaps = 1/86 (1%)
Frame = -1
Query: 659 GEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLATN-GKNGRASDVAAQVP 483
GE MVPADE+ C CVLC E+FEDFY QERD+WMF GAV++ + + G+ G ++ A+ P
Sbjct: 1053 GEPMVPADESQCACVLCCEIFEDFYCQERDEWMFNGAVHMVIPSGAGEEGSKGEIVAKGP 1112
Query: 482 IVHADCISESSIRDLGLSKDVKVEKD 405
IVHA C+SESS+ DLGL+ +K E+D
Sbjct: 1113 IVHAKCLSESSLHDLGLASSIKTEED 1138
>gb|POE58102.1| isoform 2 of polyadenylation and cleavage factor like 4 [Quercus
suber]
Length = 1113
Score = 110 bits (275), Expect = 4e-24
Identities = 50/84 (59%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVPI 480
E MVP DE+ C CVLCGE+FEDFY QER++WMFK AVY+T+++ G+ G +++ A + PI
Sbjct: 1028 ELMVPVDESQCACVLCGEVFEDFYSQEREEWMFKAAVYMTMSSREGEIGTSNESAVKGPI 1087
Query: 479 VHADCISESSIRDLGLSKDVKVEK 408
VHA+CISESSI DL L+ +K+EK
Sbjct: 1088 VHANCISESSIHDLELASSIKMEK 1111
>ref|XP_023894769.1| LOW QUALITY PROTEIN: polyadenylation and cleavage factor homolog 4
[Quercus suber]
Length = 1190
Score = 110 bits (275), Expect = 4e-24
Identities = 50/84 (59%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVPI 480
E MVP DE+ C CVLCGE+FEDFY QER++WMFK AVY+T+++ G+ G +++ A + PI
Sbjct: 1105 ELMVPVDESQCACVLCGEVFEDFYSQEREEWMFKAAVYMTMSSREGEIGTSNESAVKGPI 1164
Query: 479 VHADCISESSIRDLGLSKDVKVEK 408
VHA+CISESSI DL L+ +K+EK
Sbjct: 1165 VHANCISESSIHDLELASSIKMEK 1188
>gb|POF19617.1| polyadenylation and cleavage factor like 4 [Quercus suber]
Length = 309
Score = 107 bits (266), Expect = 4e-24
Identities = 50/89 (56%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVPI 480
E MVP DE+ C CVLCGE+FEDFY QER++WMFK AVY+T+++ G+ G +++ A + PI
Sbjct: 209 ELMVPVDESQCACVLCGEVFEDFYSQEREEWMFKAAVYMTMSSREGEIGTSNESAVKGPI 268
Query: 479 VHADCISESSIRDLGLSKDVKVEKDA*YL 393
VHA+CISESSI DL L+ +K+ + YL
Sbjct: 269 VHANCISESSIHDLELASSIKMVRLDVYL 297
>ref|XP_023905498.1| polyadenylation and cleavage factor homolog 4-like [Quercus suber]
Length = 315
Score = 107 bits (266), Expect = 5e-24
Identities = 50/89 (56%), Positives = 68/89 (76%), Gaps = 1/89 (1%)
Frame = -1
Query: 656 EQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAAQVPI 480
E MVP DE+ C CVLCGE+FEDFY QER++WMFK AVY+T+++ G+ G +++ A + PI
Sbjct: 215 ELMVPVDESQCACVLCGEVFEDFYSQEREEWMFKAAVYMTMSSREGEIGTSNESAVKGPI 274
Query: 479 VHADCISESSIRDLGLSKDVKVEKDA*YL 393
VHA+CISESSI DL L+ +K+ + YL
Sbjct: 275 VHANCISESSIHDLELASSIKMVRLDVYL 303
>gb|KDO61035.1| hypothetical protein CISIN_1g001465mg [Citrus sinensis]
gb|KDO61036.1| hypothetical protein CISIN_1g001465mg [Citrus sinensis]
Length = 604
Score = 109 bits (272), Expect = 8e-24
Identities = 50/90 (55%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = -1
Query: 668 VNGGEQMVPADENHCVCVLCGELFEDFYDQERDQWMFKGAVYLTLAT-NGKNGRASDVAA 492
++ GE MVPAD+N C CV+CGELFED Y+Q R +WMFK AVY+ + + NG+ G ++ +A
Sbjct: 515 IDEGEPMVPADDNQCACVMCGELFEDCYNQARGEWMFKAAVYMMIPSGNGEVGTTNESSA 574
Query: 491 QVPIVHADCISESSIRDLGLSKDVKVEKDA 402
+ PIVH +CISE+S+ DL + VKVEKDA
Sbjct: 575 KGPIVHGNCISENSVHDLRVISKVKVEKDA 604