BLASTX nr result
ID: Acanthopanax23_contig00006142
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00006142
(666 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017223350.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl... 106 2e-23
gb|KVI05033.1| Pre-mRNA-splicing factor 38 [Cynara cardunculus v... 88 1e-16
emb|CDP01678.1| unnamed protein product [Coffea canephora] 85 1e-15
ref|XP_012845080.1| PREDICTED: pre-mRNA-splicing factor 38B [Ery... 85 2e-15
ref|XP_020539369.1| pre-mRNA splicing factor SR-like 1 isoform X... 83 2e-15
ref|XP_020539367.1| pre-mRNA splicing factor SR-like 1 isoform X... 83 4e-15
ref|XP_002528504.1| PREDICTED: pre-mRNA-splicing factor 38B [Ric... 84 5e-15
ref|XP_020539366.1| pre-mRNA splicing factor SR-like 1 isoform X... 83 5e-15
ref|XP_012086106.1| pre-mRNA splicing factor SR-like 1 isoform X... 83 6e-15
ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protei... 83 8e-15
ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Popu... 83 9e-15
ref|XP_011005920.1| PREDICTED: pre-mRNA-splicing factor 38B-like... 83 9e-15
ref|XP_006372423.1| pre-mRNA splicing factor PRP38 family protei... 82 2e-14
gb|EOY03153.1| PRP38 family protein isoform 4 [Theobroma cacao] 80 3e-14
ref|XP_021297909.1| pre-mRNA splicing factor SR-like 1 isoform X... 80 3e-14
gb|EOY03152.1| PRP38 family protein isoform 3 [Theobroma cacao] 80 3e-14
ref|XP_020554868.1| pre-mRNA splicing factor SR-like 1 isoform X... 80 4e-14
dbj|GAV58451.1| PRP38 domain-containing protein/PRP38_assoc doma... 81 4e-14
ref|XP_007032224.2| PREDICTED: pre-mRNA-splicing factor 38B [The... 80 6e-14
gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao] ... 80 6e-14
>ref|XP_017223350.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38B
[Daucus carota subsp. sativus]
Length = 421
Score = 106 bits (265), Expect = 2e-23
Identities = 57/80 (71%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKE-VGKEN 489
SRSRSRS SI + T D PS RKDEG VRTS A+SNLAKLKD+YGDLST+KE N
Sbjct: 343 SRSRSRSHSIQMQRTSADRFPSPRKDEGPVRTS-ASSNLAKLKDMYGDLSTRKEDAENRN 401
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
PPNR+NG+EEVI LGGSTWK
Sbjct: 402 PPNRINGSEEVIRLGGSTWK 421
>gb|KVI05033.1| Pre-mRNA-splicing factor 38 [Cynara cardunculus var. scolymus]
Length = 435
Score = 88.2 bits (217), Expect = 1e-16
Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRS+SESI ARS DH PS ++E + RTS A+SNLAKL+D+YGDLST+K +
Sbjct: 357 SRSRSQSESIQARSLRLDHQPSPNREESKDRTS-ASSNLAKLRDMYGDLSTEKGDATDGR 415
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NGAEEVI LGGS+W+
Sbjct: 416 GPGRSNGAEEVIRLGGSSWR 435
>emb|CDP01678.1| unnamed protein product [Coffea canephora]
Length = 406
Score = 85.1 bits (209), Expect = 1e-15
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKE-VGKEN 489
SRSRSRS+S++ S DH S R +G + A+SNLAKLKD+YGDL QKE GK+
Sbjct: 329 SRSRSRSQSMYEHSMHGDHRSSPR--DGNKEKTTASSNLAKLKDIYGDLGNQKEDTGKDR 386
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
PNR +G EEVI LGGSTW+
Sbjct: 387 GPNRDSGTEEVIRLGGSTWR 406
>ref|XP_012845080.1| PREDICTED: pre-mRNA-splicing factor 38B [Erythranthe guttata]
gb|EYU30880.1| hypothetical protein MIMGU_mgv1a007559mg [Erythranthe guttata]
Length = 403
Score = 84.7 bits (208), Expect = 2e-15
Identities = 46/81 (56%), Positives = 60/81 (74%), Gaps = 2/81 (2%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS SIH S ++PST + E + +TSA+ SNLAKLKDLYGDL +QK+ G E+
Sbjct: 324 SRSRSRSRSIHENSRHEQNIPSTSRHESKEKTSAS-SNLAKLKDLYGDLGSQKKDGGEDK 382
Query: 485 --PNRVNGAEEVIVLGGSTWK 429
P++ +G EEVI LGGS+W+
Sbjct: 383 GGPSKPSGTEEVIRLGGSSWR 403
>ref|XP_020539369.1| pre-mRNA splicing factor SR-like 1 isoform X4 [Jatropha curcas]
Length = 281
Score = 83.2 bits (204), Expect = 2e-15
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS S+ A ++P D S +D + RTSA+ SNLAKLKD+YGD S QK + G E
Sbjct: 203 SRSRSRSRSMQAAASPFDRHSSPPRDGNKDRTSAS-SNLAKLKDMYGDASDQKGDAGLER 261
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NG EEVI LGGSTWK
Sbjct: 262 VPRRDNGGEEVIRLGGSTWK 281
>ref|XP_020539367.1| pre-mRNA splicing factor SR-like 1 isoform X3 [Jatropha curcas]
ref|XP_020539368.1| pre-mRNA splicing factor SR-like 1 isoform X3 [Jatropha curcas]
Length = 350
Score = 83.2 bits (204), Expect = 4e-15
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS S+ A ++P D S +D + RTSA+ SNLAKLKD+YGD S QK + G E
Sbjct: 272 SRSRSRSRSMQAAASPFDRHSSPPRDGNKDRTSAS-SNLAKLKDMYGDASDQKGDAGLER 330
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NG EEVI LGGSTWK
Sbjct: 331 VPRRDNGGEEVIRLGGSTWK 350
>ref|XP_002528504.1| PREDICTED: pre-mRNA-splicing factor 38B [Ricinus communis]
gb|EEF33873.1| protein with unknown function [Ricinus communis]
Length = 418
Score = 83.6 bits (205), Expect = 5e-15
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS SI A ++P D S +D G+ + ++A+SNLAKLKDLYGDLS Q+ + G E
Sbjct: 339 SRSRSRSRSIQAGASPFDRHSSPYRDGGKEKRTSASSNLAKLKDLYGDLSDQRGDGGVER 398
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R + +EE+I LGGSTWK
Sbjct: 399 APRRDDSSEEIIRLGGSTWK 418
>ref|XP_020539366.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Jatropha curcas]
Length = 364
Score = 83.2 bits (204), Expect = 5e-15
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS S+ A ++P D S +D + RTSA+ SNLAKLKD+YGD S QK + G E
Sbjct: 286 SRSRSRSRSMQAAASPFDRHSSPPRDGNKDRTSAS-SNLAKLKDMYGDASDQKGDAGLER 344
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NG EEVI LGGSTWK
Sbjct: 345 VPRRDNGGEEVIRLGGSTWK 364
>ref|XP_012086106.1| pre-mRNA splicing factor SR-like 1 isoform X1 [Jatropha curcas]
gb|KDP26015.1| hypothetical protein JCGZ_21048 [Jatropha curcas]
Length = 416
Score = 83.2 bits (204), Expect = 6e-15
Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS S+ A ++P D S +D + RTSA+ SNLAKLKD+YGD S QK + G E
Sbjct: 338 SRSRSRSRSMQAAASPFDRHSSPPRDGNKDRTSAS-SNLAKLKDMYGDASDQKGDAGLER 396
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NG EEVI LGGSTWK
Sbjct: 397 VPRRDNGGEEVIRLGGSTWK 416
>ref|XP_002305255.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
gb|PNT40069.1| hypothetical protein POPTR_004G075700v3 [Populus trichocarpa]
Length = 397
Score = 82.8 bits (203), Expect = 8e-15
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS+S+ A ++P D P+ ++D + RTSA+ SNLAKLKDLYGDL QK + G E
Sbjct: 319 SRSRSRSQSLQAGTSPFDQHPTPQRDGSKDRTSAS-SNLAKLKDLYGDLGDQKGDAGLER 377
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R N EEV LGGSTW+
Sbjct: 378 GPRRDNDGEEVFRLGGSTWR 397
>ref|XP_006384124.1| hypothetical protein POPTR_0004s07420g [Populus trichocarpa]
gb|ABK92555.1| unknown [Populus trichocarpa]
gb|PNT40066.1| hypothetical protein POPTR_004G075700v3 [Populus trichocarpa]
Length = 427
Score = 82.8 bits (203), Expect = 9e-15
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS+S+ A ++P D P+ ++D + RTSA+ SNLAKLKDLYGDL QK + G E
Sbjct: 349 SRSRSRSQSLQAGTSPFDQHPTPQRDGSKDRTSAS-SNLAKLKDLYGDLGDQKGDAGLER 407
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R N EEV LGGSTW+
Sbjct: 408 GPRRDNDGEEVFRLGGSTWR 427
>ref|XP_011005920.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
ref|XP_011005921.1| PREDICTED: pre-mRNA-splicing factor 38B-like [Populus euphratica]
Length = 429
Score = 82.8 bits (203), Expect = 9e-15
Identities = 46/80 (57%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS+S+ A ++P D P+ ++D + RTSA+ SNLAKLKDLYGDL QK + G E
Sbjct: 351 SRSRSRSQSLQAGTSPFDQHPTPQRDGSKDRTSAS-SNLAKLKDLYGDLGDQKGDAGLER 409
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R N EEV LGGSTW+
Sbjct: 410 VPRRDNDGEEVFRLGGSTWR 429
>ref|XP_006372423.1| pre-mRNA splicing factor PRP38 family protein [Populus trichocarpa]
gb|PNS23480.1| hypothetical protein POPTR_T059800v3 [Populus trichocarpa]
Length = 376
Score = 81.6 bits (200), Expect = 2e-14
Identities = 46/80 (57%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQK-EVGKEN 489
SRSRSRS S+ A ++P D P+ ++D + +TSA SNLAKLKDLYGDLS QK + G E
Sbjct: 298 SRSRSRSRSLQAGASPFDRHPTPQRDGNKDKTSAP-SNLAKLKDLYGDLSDQKGDAGLER 356
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R N EEV LGGSTW+
Sbjct: 357 VPRRDNDGEEVFRLGGSTWR 376
>gb|EOY03153.1| PRP38 family protein isoform 4 [Theobroma cacao]
Length = 304
Score = 80.5 bits (197), Expect = 3e-14
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS S+ A ++ D S K+ + +TSA+ SNLAKLKDLYGDLS QK G E
Sbjct: 227 SRSRSRSRSLQAGNSHFDRHSSPPKEGSKEKTSAS-SNLAKLKDLYGDLSDQKGDGFERV 285
Query: 485 PNRVNGAEEVIVLGGSTWK 429
P R N EEVI LGGSTWK
Sbjct: 286 PRRDNSGEEVIRLGGSTWK 304
>ref|XP_021297909.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Herrania umbratica]
Length = 321
Score = 80.5 bits (197), Expect = 3e-14
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS S+ A ++ D S K+ + +TSA+ SNLAKLKDLYGDLS QK G E
Sbjct: 244 SRSRSRSRSLQAGNSHFDRHSSPLKEGSKEKTSAS-SNLAKLKDLYGDLSDQKGDGFERV 302
Query: 485 PNRVNGAEEVIVLGGSTWK 429
P R N EEVI LGGSTWK
Sbjct: 303 PRRDNSGEEVIRLGGSTWK 321
>gb|EOY03152.1| PRP38 family protein isoform 3 [Theobroma cacao]
Length = 326
Score = 80.5 bits (197), Expect = 3e-14
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS S+ A ++ D S K+ + +TSA+ SNLAKLKDLYGDLS QK G E
Sbjct: 249 SRSRSRSRSLQAGNSHFDRHSSPPKEGSKEKTSAS-SNLAKLKDLYGDLSDQKGDGFERV 307
Query: 485 PNRVNGAEEVIVLGGSTWK 429
P R N EEVI LGGSTWK
Sbjct: 308 PRRDNSGEEVIRLGGSTWK 326
>ref|XP_020554868.1| pre-mRNA splicing factor SR-like 1 isoform X2 [Sesamum indicum]
Length = 311
Score = 80.1 bits (196), Expect = 4e-14
Identities = 46/78 (58%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Frame = -2
Query: 659 SRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKE-VGKENPP 483
S+SRS SI+ + H PS + + RTSA+ SNLAKLKDLYGDLS QKE GK+ P
Sbjct: 238 SKSRSRSIYGH---DQHRPSPSGQDSKERTSAS-SNLAKLKDLYGDLSNQKEDAGKDKGP 293
Query: 482 NRVNGAEEVIVLGGSTWK 429
NR +G EEVI LGGSTW+
Sbjct: 294 NRPSGTEEVIRLGGSTWR 311
>dbj|GAV58451.1| PRP38 domain-containing protein/PRP38_assoc domain-containing
protein [Cephalotus follicularis]
Length = 417
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/80 (58%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKE-VGKEN 489
SRS SRS S+ A + D S ++DE + +TSA+ SNLAKL+DLYGDLS QKE E
Sbjct: 339 SRSSSRSRSLQAGISSFDRHSSPQRDESKDKTSAS-SNLAKLRDLYGDLSNQKEDASSER 397
Query: 488 PPNRVNGAEEVIVLGGSTWK 429
P R NG EEVI LGGSTWK
Sbjct: 398 VPRRDNGGEEVIRLGGSTWK 417
>ref|XP_007032224.2| PREDICTED: pre-mRNA-splicing factor 38B [Theobroma cacao]
ref|XP_007032225.2| PREDICTED: pre-mRNA-splicing factor 38B [Theobroma cacao]
ref|XP_017975693.1| PREDICTED: pre-mRNA-splicing factor 38B [Theobroma cacao]
Length = 446
Score = 80.5 bits (197), Expect = 6e-14
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS S+ A ++ D S K+ + +TSA+ SNLAKLKDLYGDLS QK G E
Sbjct: 369 SRSRSRSRSLQAGNSHFDRHSSPPKEGSKEKTSAS-SNLAKLKDLYGDLSDQKGDGFERV 427
Query: 485 PNRVNGAEEVIVLGGSTWK 429
P R N EEVI LGGSTWK
Sbjct: 428 PRRDNSGEEVIRLGGSTWK 446
>gb|EOY03150.1| PRP38 family protein isoform 1 [Theobroma cacao]
gb|EOY03151.1| PRP38 family protein isoform 1 [Theobroma cacao]
Length = 446
Score = 80.5 bits (197), Expect = 6e-14
Identities = 47/79 (59%), Positives = 54/79 (68%)
Frame = -2
Query: 665 SRSRSRSESIHARSTPNDHLPSTRKDEGQVRTSAAASNLAKLKDLYGDLSTQKEVGKENP 486
SRSRSRS S+ A ++ D S K+ + +TSA+ SNLAKLKDLYGDLS QK G E
Sbjct: 369 SRSRSRSRSLQAGNSHFDRHSSPPKEGSKEKTSAS-SNLAKLKDLYGDLSDQKGDGFERV 427
Query: 485 PNRVNGAEEVIVLGGSTWK 429
P R N EEVI LGGSTWK
Sbjct: 428 PRRDNSGEEVIRLGGSTWK 446