BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00006082
         (1180 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017244028.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   307   e-100
ref|XP_023760487.1| RNA-binding protein CP33, chloroplastic [Lac...   292   7e-94
ref|XP_019153381.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   285   6e-91
ref|XP_011074215.1| RNA-binding protein CP33, chloroplastic-like...   274   5e-87
gb|KVH99705.1| Nucleotide-binding, alpha-beta plait, partial [Cy...   271   4e-86
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   271   9e-86
ref|XP_002285735.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   271   9e-86
ref|XP_012838884.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   270   1e-85
emb|CDP20861.1| unnamed protein product [Coffea canephora]            269   9e-85
ref|XP_009770625.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   264   6e-83
ref|XP_019262668.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   264   9e-83
ref|XP_009589536.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   261   1e-81
gb|KZV31581.1| 28 kDa ribonucleoprotein, chloroplastic [Dorcocer...   259   5e-81
gb|PON91638.1| Splicing factor-like protein [Trema orientalis]        256   2e-79
ref|XP_007018692.2| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   255   2e-79
gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlise...   253   4e-79
gb|OMO96466.1| hypothetical protein CCACVL1_04944 [Corchorus cap...   254   4e-79
gb|EOY15917.1| RNA-binding family protein, putative [Theobroma c...   254   7e-79
ref|XP_006363306.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop...   253   2e-78
ref|XP_016569149.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   252   2e-78

>ref|XP_017244028.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Daucus carota
           subsp. sativus]
 ref|XP_017244029.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Daucus carota
           subsp. sativus]
 gb|KZM99758.1| hypothetical protein DCAR_012880 [Daucus carota subsp. sativus]
          Length = 298

 Score =  307 bits (787), Expect = e-100
 Identities = 167/300 (55%), Positives = 202/300 (67%), Gaps = 2/300 (0%)
 Frame = +1

Query: 106 SFPSISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSILRACSSI 285
           S   IS     +  FY TNF S P S+ L + + I+P  N  +F+ Q       +A    
Sbjct: 13  SLSPISQFPPHKILFYTTNFISLPSSLSLNSLSYITP--NAPLFKTQ-------KAPPLF 63

Query: 286 QAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFEKYGTVVD 465
            AQA ++TP                    SRTR+ AQNVPW CTA DIRPLFEKYGTVV 
Sbjct: 64  LAQAAVETPVAIEAEEEEEEEDEE-----SRTRVCAQNVPWDCTADDIRPLFEKYGTVVG 118

Query: 466 VELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXXXXXXXXX 645
           VELSMYNKTRNRGL FVTMGSHEEA+AA  NL+++E+EGR+L ++WA             
Sbjct: 119 VELSMYNKTRNRGLAFVTMGSHEEAVAAITNLEAFEYEGRSLRLAWAKPRKKKVPPPRVL 178

Query: 646 XXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGFVSFNTKN 825
                +HNLFVANLP+QAR KDL EFFN++NANVVSAE+IF ENPRGSAGYGF+SFNTK 
Sbjct: 179 PKQVPIHNLFVANLPYQARGKDLMEFFNSQNANVVSAEVIFRENPRGSAGYGFISFNTKE 238

Query: 826 EAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSE--STSNKLNPDGEKTETPDEV 999
           EA+AAL+ F GK+FMGRPIR+A SK+FLRQ TK S+Q E  ++S+KLN D E+TET  EV
Sbjct: 239 EADAALSTFQGKLFMGRPIRIAPSKKFLRQGTKESMQQEESTSSSKLNSDEEQTETSAEV 298


>ref|XP_023760487.1| RNA-binding protein CP33, chloroplastic [Lactuca sativa]
 gb|PLY87993.1| hypothetical protein LSAT_6X104200 [Lactuca sativa]
          Length = 297

 Score =  292 bits (748), Expect = 7e-94
 Identities = 167/299 (55%), Positives = 197/299 (65%), Gaps = 8/299 (2%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQC--FFYPTNFPSFPP-----SILLATSNSISPPRNTLVFRP 243
           MAL R + FPS S    QQ   FF P N   F P     S L + S S S P   L  + 
Sbjct: 1   MALLRFVCFPSPSLFPNQQNPQFFQPINPQFFQPINPNPSSLQSLSLSASLPNRFL--KT 58

Query: 244 QIPTHSILRACSSIQA-QAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTA 420
             P   + +  S+++A Q E  T                     SRTRLLAQNVPW+CTA
Sbjct: 59  HRPNFLVFQTQSAVEAPQVETSTDTVQQLEEEEVEDE------GSRTRLLAQNVPWTCTA 112

Query: 421 SDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMS 600
            +IRPLFEK+GTVVD+E+SMY+KTRNRGLVFV+MGSHEEALAAF NL SYEF GR LN++
Sbjct: 113 DEIRPLFEKHGTVVDIEVSMYSKTRNRGLVFVSMGSHEEALAAFTNLQSYEFMGRTLNVT 172

Query: 601 WAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENP 780
           WA                  VHNLFVANLPFQAR+KDL +FFNAEN+N VSAE+IFHE P
Sbjct: 173 WAKPKKSKDPSTPAQPKPAPVHNLFVANLPFQARSKDLMDFFNAENSNPVSAEVIFHEKP 232

Query: 781 RGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNK 957
           R SAGYGFV+FNTK+EAEAAL+AF GK+FMGR IRV+ SKRFLRQ TK +++S+  S K
Sbjct: 233 RSSAGYGFVAFNTKHEAEAALSAFQGKIFMGRAIRVSPSKRFLRQSTKKALESKEESTK 291


>ref|XP_019153381.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Ipomoea nil]
          Length = 290

 Score =  285 bits (728), Expect = 6e-91
 Identities = 160/312 (51%), Positives = 199/312 (63%), Gaps = 15/312 (4%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSF-----------PPSILLATSNSISPPRNTL 231
           M++  L+  PS  H   Q+  F P +F S            PP++ L TS+ + P   T 
Sbjct: 1   MSIHGLVCSPSTLHFCAQELPFSPPSFSSLYKSARPTPLLIPPTLSLRTSSLLLPFPVT- 59

Query: 232 VFRPQIPTHSILRACSSIQAQA----EIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQN 399
              P+ P   +L+A + +  +     E+Q+                    A   R++AQN
Sbjct: 60  ---PKTPAFHVLQATAPLSEEIGRTEEVQS-----------------GDEAPGNRVVAQN 99

Query: 400 VPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFE 579
           VPW+ TA D+RPLFEKYGTVVD+ELSMYNK+RNRGL FVTMGSHEEA+AA  NLDSYEFE
Sbjct: 100 VPWTSTADDLRPLFEKYGTVVDIELSMYNKSRNRGLAFVTMGSHEEAVAALTNLDSYEFE 159

Query: 580 GRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAE 759
           GR L ++WA                  ++NLFVANLPFQARAKDL+EFFNA+N NV SAE
Sbjct: 160 GRLLKLNWATPKPKKPSSPPVPKPKP-IYNLFVANLPFQARAKDLREFFNADNGNVASAE 218

Query: 760 IIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQS 939
           +IF E+PR SAGYGFVSFNTK  AEAAL AF GK FMGRPIRVARSK +LR++TK  IQS
Sbjct: 219 VIFLEDPRRSAGYGFVSFNTKEAAEAALLAFEGKEFMGRPIRVARSKMYLREQTKLDIQS 278

Query: 940 ESTSNKLNPDGE 975
           +S  ++ NP+GE
Sbjct: 279 QSAPSESNPEGE 290


>ref|XP_011074215.1| RNA-binding protein CP33, chloroplastic-like [Sesamum indicum]
          Length = 269

 Score =  274 bits (700), Expect = 5e-87
 Identities = 156/287 (54%), Positives = 184/287 (64%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSI 264
           MA FRL+  P  +   +    F     PS PP+  L +  +     N  +F  Q+     
Sbjct: 1   MAAFRLVYLPPAAAQFSHNHLF----LPSPPPNPCLLSLTTKHRRSNLQLFLAQVQ---- 52

Query: 265 LRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFE 444
           ++A  +I+++  I+                      S+TRLL QNVPW+CT  DIRPLF 
Sbjct: 53  VQAQPTIKSETAIEN-------------VVEEEEEVSKTRLLVQNVPWTCTVDDIRPLFA 99

Query: 445 KYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXX 624
            YGTVVD+E SMYNKT+NRGL FVTMGSHEEALAA NNL+S EFEGR L ++WA      
Sbjct: 100 NYGTVVDIEFSMYNKTKNRGLAFVTMGSHEEALAALNNLESTEFEGRVLKLNWAKPKKKK 159

Query: 625 XXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGF 804
                       VHNLFVANLPFQA A DLK FFNA+NANVVSAE+IF +NPR SAGYGF
Sbjct: 160 PSSLPQPKPLP-VHNLFVANLPFQAGANDLKNFFNADNANVVSAEVIFQDNPRRSAGYGF 218

Query: 805 VSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSES 945
           VSFNTK EAEAAL  F GK FMGR IRVARS+RFLRQETK++IQSES
Sbjct: 219 VSFNTKAEAEAALAIFQGKEFMGRAIRVARSRRFLRQETKSAIQSES 265


>gb|KVH99705.1| Nucleotide-binding, alpha-beta plait, partial [Cynara cardunculus
           var. scolymus]
          Length = 268

 Score =  271 bits (694), Expect = 4e-86
 Identities = 161/305 (52%), Positives = 188/305 (61%), Gaps = 2/305 (0%)
 Frame = +1

Query: 85  MALFRLLSFPSIS--HLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTH 258
           MAL R L  PS S  H    Q FF P N P+  PS L + S S S P     F+   P  
Sbjct: 1   MALLRFLCLPSASIFHNQQHQHFFQPIN-PN--PSYLQSLSLSASLPNR--FFKTHRPNF 55

Query: 259 SILRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPL 438
            + +  S+I+A     +P                   ASRTRLLAQNVPW+CTA +IRPL
Sbjct: 56  LVFQTQSAIEAPQVENSPDTVEQLEDE----------ASRTRLLAQNVPWTCTADEIRPL 105

Query: 439 FEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXX 618
           FEKYGTVVD+E+SMY+KTRNRGLVFV+MGSHEEALAAF NL SYEF GR LN++WA    
Sbjct: 106 FEKYGTVVDIEVSMYSKTRNRGLVFVSMGSHEEALAAFTNLQSYEFMGRNLNLTWAKPRK 165

Query: 619 XXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGY 798
                         VHNLFVANLPFQAR+KDL EFF+AENANVVSAEIIFHE PRGSAGY
Sbjct: 166 TPKPSAPAQPKLVPVHNLFVANLPFQARSKDLMEFFSAENANVVSAEIIFHEKPRGSAGY 225

Query: 799 GFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNKLNPDGEK 978
           GFVSFNTK EAEAAL+AF GK                      +++S+  S+K   +GE+
Sbjct: 226 GFVSFNTKQEAEAALSAFQGK----------------------ALESKDESSKSETEGEQ 263

Query: 979 TETPD 993
            +T D
Sbjct: 264 AQTAD 268


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  271 bits (694), Expect = 9e-86
 Identities = 151/305 (49%), Positives = 196/305 (64%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSI 264
           MAL R L FPS +   T Q    P +        +L+ S+S SP  + L  R    T  I
Sbjct: 1   MALLRHLCFPSTTSFLTXQPLQKPLHS-------ILSFSSSFSPLSHALPLRX---TRRI 50

Query: 265 LRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFE 444
                S  AQ +   P                    SRTRL+AQN+PW+CTA DIR LFE
Sbjct: 51  NLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFE 110

Query: 445 KYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXX 624
           KYGTV+DVELSM+NKTRNRGL F++MGS EEALAA +NL+SYE EGRA+ +++A      
Sbjct: 111 KYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKK 170

Query: 625 XXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGF 804
                        +NLF+ANLP+QARAKDL+EFF++ N NVVSAE+IFHENPR S+GYGF
Sbjct: 171 PSSPIQHKPVTP-YNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGF 229

Query: 805 VSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNKLNPDGEKTE 984
           VSF +K EA+ AL++F G+MFMGRP+RVARS+RF+++E K S Q+E  +N LN + E++ 
Sbjct: 230 VSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVANPLNSNSEQSG 289

Query: 985 TPDEV 999
             D++
Sbjct: 290 EGDDI 294


>ref|XP_002285735.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
           vinifera]
 ref|XP_010664354.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
           vinifera]
 ref|XP_010664355.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
           vinifera]
 emb|CBI19207.3| unnamed protein product, partial [Vitis vinifera]
          Length = 294

 Score =  271 bits (694), Expect = 9e-86
 Identities = 151/305 (49%), Positives = 196/305 (64%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSI 264
           MAL R L FPS +   T Q    P +        +L+ S+S SP  + L  R    T  I
Sbjct: 1   MALLRHLCFPSTTSFLTPQPLQKPLHS-------ILSFSSSFSPLSHALPLRT---TRRI 50

Query: 265 LRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFE 444
                S  AQ +   P                    SRTRL+AQN+PW+CTA DIR LFE
Sbjct: 51  NLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFE 110

Query: 445 KYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXX 624
           KYGTV+DVELSM+NKTRNRGL F++MGS EEALAA +NL+SYE EGRA+ +++A      
Sbjct: 111 KYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKK 170

Query: 625 XXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGF 804
                        +NLF+ANLP+QARAKDL+EFF++ N NVVSAE+IFHENPR S+GYGF
Sbjct: 171 PSSPIQHKPVTP-YNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGF 229

Query: 805 VSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNKLNPDGEKTE 984
           VSF +K EA+ AL++F G+MFMGRP+RVARS+RF+++E K S Q+E  +N LN + E++ 
Sbjct: 230 VSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVANPLNSNSEQSG 289

Query: 985 TPDEV 999
             D++
Sbjct: 290 EGDDI 294


>ref|XP_012838884.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Erythranthe
           guttata]
 gb|EYU36476.1| hypothetical protein MIMGU_mgv1a011581mg [Erythranthe guttata]
          Length = 277

 Score =  270 bits (691), Expect = 1e-85
 Identities = 155/287 (54%), Positives = 187/287 (65%), Gaps = 1/287 (0%)
 Frame = +1

Query: 88  ALFRLLSFP-SISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSI 264
           A F LL+FP + +H S     F  +  PS+ P +L  T+ +    R  L       T  +
Sbjct: 3   AAFGLLNFPPATAHFSKNSHLFLLS--PSYNPCLLSLTTTTTKRRRANLQLFIVQSTPQV 60

Query: 265 LRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFE 444
               +++Q++A  +                      S+TRLL QNVPW+CTA DIRPL E
Sbjct: 61  EAIPAAVQSEAPEEN--------------VAEEDEVSQTRLLLQNVPWTCTADDIRPLVE 106

Query: 445 KYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXX 624
           K+GTVVD+E SMYNK+RNRGL FVTMGSHEEA+AA  +L+S EFEGR L ++WA      
Sbjct: 107 KFGTVVDIEFSMYNKSRNRGLAFVTMGSHEEAVAALTSLNSSEFEGRVLQLNWAKPKKVK 166

Query: 625 XXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGF 804
                       VHNL+V NLPFQARAKDL++FFNA+NANVVSAEIIF + PR SAGYGF
Sbjct: 167 PSTVAEPKPLP-VHNLYVTNLPFQARAKDLRDFFNADNANVVSAEIIFQDTPRRSAGYGF 225

Query: 805 VSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSES 945
           VSFNTK EAEAALTAF GK FMGR IRVA SKRFLRQ TKA+I+SES
Sbjct: 226 VSFNTKAEAEAALTAFQGKEFMGRSIRVAFSKRFLRQATKATIESES 272


>emb|CDP20861.1| unnamed protein product [Coffea canephora]
          Length = 302

 Score =  269 bits (688), Expect = 9e-85
 Identities = 136/195 (69%), Positives = 155/195 (79%), Gaps = 1/195 (0%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           S+TR+LAQNVPW+ T  D+RPLFEKYGTVVD+ELSMYNKTRNRGL FVTM SHEEALAAF
Sbjct: 103 SKTRILAQNVPWTSTVDDLRPLFEKYGTVVDIELSMYNKTRNRGLAFVTMASHEEALAAF 162

Query: 553 NNLDSYEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNA 732
            NL+SY+++GR L ++WA                  +HNLFVANL F ARAKDLKEFFNA
Sbjct: 163 RNLESYDYQGRVLKLNWAKPKKIKPATPPKPKTLP-IHNLFVANLHFAARAKDLKEFFNA 221

Query: 733 ENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLR 912
            N NVVSAEIIF +NPR SAGYGFVSFNTK EAEAAL  F GK FMGRPIRVARS+RFLR
Sbjct: 222 NNGNVVSAEIIFEDNPRRSAGYGFVSFNTKEEAEAALVGFKGKEFMGRPIRVARSRRFLR 281

Query: 913 QETKASIQSE-STSN 954
            +TKA +QS+ +T+N
Sbjct: 282 PQTKADVQSDIATAN 296


>ref|XP_009770625.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
           sylvestris]
 ref|XP_016462728.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Nicotiana
           tabacum]
          Length = 293

 Score =  264 bits (675), Expect = 6e-83
 Identities = 155/304 (50%), Positives = 192/304 (63%), Gaps = 12/304 (3%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQC-----------FFYPTNFPSFPPSILLATSNSISPPRNTL 231
           MAL RLLS PS  H ST Q              + +  P   PS +    +S+SP    L
Sbjct: 1   MALLRLLSSPSQLHFSTTQFSSSSSSPALFPLHHQSIIPILSPSTVSLHISSLSP---LL 57

Query: 232 VFRPQIPTHSILRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWS 411
             +PQ P +  +  CSS+    E+Q                     +SRTR+LAQN PW+
Sbjct: 58  PIKPQKP-YLYISHCSSLAHTPELQQDQEEQSEDE-----------SSRTRILAQNAPWT 105

Query: 412 CTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRAL 591
            TA D+RPLFEKYGTV+D+E++MYNKTR+RGLVFVTMGSHEEA A   NL++YE EGR L
Sbjct: 106 STADDLRPLFEKYGTVMDIEVAMYNKTRSRGLVFVTMGSHEEAKAVIENLEAYELEGRPL 165

Query: 592 NMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFH 771
            ++WA                  VHN+FVANL F+AR+KDL EFF A  A+VVSAE+IF+
Sbjct: 166 RLAWA-KPKTVKPSSPPPSKPLPVHNVFVANLHFEARSKDLMEFFKANGADVVSAEVIFN 224

Query: 772 -ENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSEST 948
            +NPR SAGYGFVSFNTK EA+AAL++F GK FMGRPIRVA SKRFLR ETK  +QS+  
Sbjct: 225 SDNPRRSAGYGFVSFNTKVEADAALSSFEGKEFMGRPIRVAHSKRFLRGETKKILQSQDV 284

Query: 949 SNKL 960
           S++L
Sbjct: 285 SSEL 288


>ref|XP_019262668.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
           attenuata]
 gb|OIT37660.1| 29 kda ribonucleoprotein a, chloroplastic [Nicotiana attenuata]
          Length = 292

 Score =  264 bits (674), Expect = 9e-83
 Identities = 155/303 (51%), Positives = 190/303 (62%), Gaps = 11/303 (3%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQC----------FFYPTNFPSFPPSILLATSNSISPPRNTLV 234
           MAL RLLS PS  H ST Q           F + +  P   PS +    +S+SP    L 
Sbjct: 1   MALLRLLSSPSQLHFSTPQFPSSSSPALFPFHHQSTIPILSPSTVSLHISSLSP---LLP 57

Query: 235 FRPQIPTHSILRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSC 414
            +P  P +  +  CSS     E+Q                     +SRTR+LAQN PW+ 
Sbjct: 58  IKPHKP-YLYISHCSSSAQTPELQQDQEEQSEDE-----------SSRTRILAQNAPWTS 105

Query: 415 TASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALN 594
           TA D+RPLFEKYGTV D+E++MYNKTR+RGLVFVTMGSHEEA A   NL++YE EGR L 
Sbjct: 106 TADDLRPLFEKYGTVKDIEVAMYNKTRSRGLVFVTMGSHEEAKAVLENLEAYELEGRPLR 165

Query: 595 MSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFH- 771
           ++WA                  VHN+FVANL F+AR+KDL EFF A  A+VVSAE+IF+ 
Sbjct: 166 LAWA-KPKTVKPSSPPPSKPLPVHNVFVANLHFEARSKDLMEFFKANGADVVSAEVIFNS 224

Query: 772 ENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTS 951
           +NPR SAGYGFVSFNTK EA+AAL++F GK FMGRPIRVA SKRFLR ETK  +QS+  S
Sbjct: 225 DNPRRSAGYGFVSFNTKVEADAALSSFEGKEFMGRPIRVAHSKRFLRGETKKILQSQEVS 284

Query: 952 NKL 960
           ++L
Sbjct: 285 SEL 287


>ref|XP_009589536.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Nicotiana
           tomentosiformis]
 ref|XP_016477080.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Nicotiana
           tabacum]
          Length = 293

 Score =  261 bits (667), Expect = 1e-81
 Identities = 157/306 (51%), Positives = 190/306 (62%), Gaps = 9/306 (2%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQ---CFFYPTNFPSFPPSILLATSNS-----ISPPRNTLVFR 240
           MAL RLLS PS  H ST Q       P  FP    S++   S+S     IS     L  +
Sbjct: 1   MALLRLLSSPSQLHFSTTQFPSSSSSPALFPLHHQSVIPILSSSTVSLHISSLSPLLPIK 60

Query: 241 PQIPTHSILRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTA 420
           P      I    SS QA    Q                      SRTR+LAQN PW+ TA
Sbjct: 61  PPKSYLYISHCSSSTQAPESQQDQEEQSEDE------------GSRTRILAQNTPWTSTA 108

Query: 421 SDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMS 600
            D+RPLFEKYGTV+D+E++MYNKTR+RGLVFVTMGSHEEA A   NL++YE EGR L ++
Sbjct: 109 DDLRPLFEKYGTVMDIEVAMYNKTRSRGLVFVTMGSHEEAKAVLENLEAYELEGRPLRLA 168

Query: 601 WAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIF-HEN 777
           WA                  VHN+FVANL F+AR+KDL EFF A  A+VVSAE+IF ++N
Sbjct: 169 WA-KPKTVKPSSPPPSKPLPVHNVFVANLHFEARSKDLMEFFKANGADVVSAEVIFNNDN 227

Query: 778 PRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNK 957
           PR SAGYGFVSFNTK EA+AAL++F GK FMGRPIRVA SKRFLR+ETK ++Q++  S++
Sbjct: 228 PRRSAGYGFVSFNTKVEADAALSSFEGKEFMGRPIRVAHSKRFLREETKKNLQAQELSSE 287

Query: 958 LNPDGE 975
           L   GE
Sbjct: 288 LISVGE 293


>gb|KZV31581.1| 28 kDa ribonucleoprotein, chloroplastic [Dorcoceras hygrometricum]
          Length = 301

 Score =  259 bits (663), Expect = 5e-81
 Identities = 134/206 (65%), Positives = 152/206 (73%), Gaps = 9/206 (4%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           S TRLL QNVPW+C+  DIRPLFE YG+VVD+E SMYNKTRNRGL FVTM S+EEA+AA 
Sbjct: 84  SNTRLLVQNVPWTCSVDDIRPLFENYGSVVDIEFSMYNKTRNRGLAFVTMSSNEEAVAAL 143

Query: 553 NNLDS---------YEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARA 705
           NNL+S         +EFEGR L + WA                  VHNLFVANLPFQAR 
Sbjct: 144 NNLESKASDCEFKIFEFEGRVLKLDWANPKKKKPSSPSQPKQLP-VHNLFVANLPFQARG 202

Query: 706 KDLKEFFNAENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIR 885
           KDLKEFFNA   NVVSAE+IF + PR SAGYGFVSFNT+ EA+AAL  F GK FMGRPIR
Sbjct: 203 KDLKEFFNANGGNVVSAEVIFQDKPRRSAGYGFVSFNTEAEAQAALATFEGKEFMGRPIR 262

Query: 886 VARSKRFLRQETKASIQSESTSNKLN 963
           VARSKRFLRQETKA+I+SE+  + L+
Sbjct: 263 VARSKRFLRQETKATIESENAQSSLS 288


>gb|PON91638.1| Splicing factor-like protein [Trema orientalis]
          Length = 310

 Score =  256 bits (653), Expect = 2e-79
 Identities = 150/311 (48%), Positives = 186/311 (59%), Gaps = 8/311 (2%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSFPPSILLATSN--SISPPRNTLVFRPQIP-- 252
           MAL R LS PS + L  ++  F P +FP+  P  +  + +  S+ P  +T   R  +   
Sbjct: 1   MALLRFLSSPSTTFLPIERHPFTPLSFPNNSPHSISVSCSLPSLFPLSHTKSRRLPVSRT 60

Query: 253 ----THSILRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTA 420
                + +L   S+ Q QA   +                      + RL AQNVPW+ T 
Sbjct: 61  KRDSANFLLHFSSTTQEQALDSSSPVSISSEAGEFESDSDSEEVLKDRLYAQNVPWNATT 120

Query: 421 SDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMS 600
            DIR LFEKYGTVVDVELSMYNKTRNRGL FVTMGS EEAL A NNL SYE EGR + + 
Sbjct: 121 EDIRALFEKYGTVVDVELSMYNKTRNRGLAFVTMGSPEEALTALNNLQSYELEGRIIKID 180

Query: 601 WAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENP 780
           +A                    NLFVANL ++ARAKDL+EFFN+E  +VVSAE+IFHENP
Sbjct: 181 YARPRKKKVATPVQPKPEV-TFNLFVANLSYEARAKDLREFFNSEGHSVVSAEVIFHENP 239

Query: 781 RGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNKL 960
           R S GYGFVSF +K EAE AL+A  GK+FMGRPIRVARSK+F++Q    S +SE  S +L
Sbjct: 240 RRSLGYGFVSFKSKKEAETALSAIQGKIFMGRPIRVARSKQFVKQPITESAESEDFSTEL 299

Query: 961 NPDGEKTETPD 993
           N  G++ E  D
Sbjct: 300 NSGGKEAEIAD 310


>ref|XP_007018692.2| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Theobroma
           cacao]
          Length = 290

 Score =  255 bits (651), Expect = 2e-79
 Identities = 129/205 (62%), Positives = 158/205 (77%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           S+TRL+AQNVPW+CT  DIR LFEKYGTVVDVELSM+NKTRNRGL FV+M S EEALAA 
Sbjct: 84  SKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKTRNRGLAFVSMASPEEALAAL 143

Query: 553 NNLDSYEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNA 732
           NNL+SYEFEGR L +++A                    NLFVANL ++ARAK LKEFF++
Sbjct: 144 NNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPVP-AFNLFVANLSYEARAKHLKEFFSS 202

Query: 733 ENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLR 912
           E ANVVSAE+IFHENPR S+GYGFVSF +K EA+AA++AF GKMFMGRPIRVAR ++F++
Sbjct: 203 EGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFMGRPIRVARGRQFVK 262

Query: 913 QETKASIQSESTSNKLNPDGEKTET 987
            ++  S Q +  SN+LN D E+ +T
Sbjct: 263 VQSDDSSQPDDKSNELNSDLEQVDT 287


>gb|EPS70093.1| hypothetical protein M569_04668, partial [Genlisea aurea]
          Length = 263

 Score =  253 bits (647), Expect = 4e-79
 Identities = 128/191 (67%), Positives = 148/191 (77%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           SRTRLL QNVPW+CTA DI+PLFE YG+V+++E SMYNKTRNRGL FVTM SHEEALAA 
Sbjct: 78  SRTRLLVQNVPWTCTADDIQPLFENYGSVIEIEFSMYNKTRNRGLAFVTMASHEEALAAL 137

Query: 553 NNLDSYEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNA 732
           N+L+S EFEGR L ++WA                  VHNLFVANLPF+AR KDLK+FFNA
Sbjct: 138 NSLESTEFEGRVLKLNWAKPKKEKNKTGVVITQPLPVHNLFVANLPFEARPKDLKDFFNA 197

Query: 733 ENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLR 912
                VSAE+I++ENPR  AGYGFVSF TK EA+AALT+F  K FMGRPIRVARSKRFLR
Sbjct: 198 -----VSAEVIYNENPRRPAGYGFVSFYTKEEADAALTSFQAKEFMGRPIRVARSKRFLR 252

Query: 913 QETKASIQSES 945
           + TKA+IQ E+
Sbjct: 253 EGTKAAIQLEN 263


>gb|OMO96466.1| hypothetical protein CCACVL1_04944 [Corchorus capsularis]
          Length = 287

 Score =  254 bits (649), Expect = 4e-79
 Identities = 129/205 (62%), Positives = 159/205 (77%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           S+TRLLAQNVPW+CTA DIR LFEK+GTVVDVELSM+NKTRNRGL FV+M S E+ALAA 
Sbjct: 82  SKTRLLAQNVPWTCTAEDIRSLFEKHGTVVDVELSMHNKTRNRGLAFVSMASPEDALAAL 141

Query: 553 NNLDSYEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNA 732
           NNL+SYEFEGR L +++A                    NLFVANLPF+ARAK LKEFF +
Sbjct: 142 NNLESYEFEGRTLRLNYAKPKKKKSPPPEKPKPVPGF-NLFVANLPFEARAKHLKEFFTS 200

Query: 733 ENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLR 912
           E AN+VSAE+IFHENPR S+GYGFVSF TK EA+AA++AF GKMFMGRP+RVARS++F++
Sbjct: 201 EGANIVSAEVIFHENPRKSSGYGFVSFKTKKEADAAISAFQGKMFMGRPLRVARSRQFVK 260

Query: 913 QETKASIQSESTSNKLNPDGEKTET 987
            +++ S   +  S + N D E++ET
Sbjct: 261 VKSEDSSPPDDKSTEPNSDLEQSET 285


>gb|EOY15917.1| RNA-binding family protein, putative [Theobroma cacao]
          Length = 290

 Score =  254 bits (648), Expect = 7e-79
 Identities = 129/207 (62%), Positives = 159/207 (76%)
 Frame = +1

Query: 373 SRTRLLAQNVPWSCTASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAF 552
           S+TRL+AQNVPW+CT  DIR LFEKYGTVVDVELSM+NK RNRGL FV+M S EEALAA 
Sbjct: 84  SKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKARNRGLAFVSMASPEEALAAL 143

Query: 553 NNLDSYEFEGRALNMSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNA 732
           NNL+SYEFEGR L +++A                    NLFVANL ++ARAK LKEFF++
Sbjct: 144 NNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPVP-AFNLFVANLSYEARAKHLKEFFSS 202

Query: 733 ENANVVSAEIIFHENPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLR 912
           E ANVVSAE+IFHENPR S+GYGFVSF +K EA+AA++AF GKMFMGRPIRVARS++F++
Sbjct: 203 EGANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFMGRPIRVARSRQFVK 262

Query: 913 QETKASIQSESTSNKLNPDGEKTETPD 993
            ++  S Q +  SN+LN D E+ +T +
Sbjct: 263 VQSDDSSQPDDKSNELNFDLEQVDTEE 289


>ref|XP_006363306.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
           tuberosum]
 ref|XP_015158859.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum
           tuberosum]
          Length = 284

 Score =  253 bits (645), Expect = 2e-78
 Identities = 145/292 (49%), Positives = 183/292 (62%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSFPPSILLATSNSISPPRNTLVFRPQIPTHSI 264
           MAL RLL  PS+   S+   F  P +     P +L  +S S+  P     F P IP  + 
Sbjct: 1   MALLRLLCSPSLFPSSSSTLF--PLHHHPTTPILLSPSSISLRTP----CFSPLIPIKAQ 54

Query: 265 LRACSSIQAQAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSCTASDIRPLFE 444
                     +  QTP                   + + R+LAQN PW+ TA+D+RPLFE
Sbjct: 55  RPYLYISNCSSSAQTPETAQDLEEQLEDE------SLKRRVLAQNAPWTYTANDLRPLFE 108

Query: 445 KYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALNMSWAXXXXXX 624
           KYGTV D+E++MYNKTR+RGLVFVTMGSHEEA A   NL++YE EGR L ++WA      
Sbjct: 109 KYGTVEDIEVAMYNKTRSRGLVFVTMGSHEEAKAVLENLEAYELEGRPLRLTWAKPKIEK 168

Query: 625 XXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHENPRGSAGYGF 804
                       +HNLFVANL F+AR+ DL EFF A  ANVVSAE+IF++NPR SAGYGF
Sbjct: 169 PSSPPPSKPLP-IHNLFVANLHFEARSNDLLEFFKANGANVVSAEVIFNDNPRRSAGYGF 227

Query: 805 VSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSNKL 960
           VS NTK EA+AAL++F+GK FMGR IRVA+SKRFLR+ETK +IQS+   ++L
Sbjct: 228 VSLNTKEEADAALSSFDGKEFMGRAIRVAQSKRFLREETKKAIQSQELPSEL 279


>ref|XP_016569149.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Capsicum
           annuum]
 ref|XP_016569150.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Capsicum
           annuum]
 ref|XP_016569151.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Capsicum
           annuum]
          Length = 285

 Score =  252 bits (644), Expect = 2e-78
 Identities = 152/302 (50%), Positives = 189/302 (62%), Gaps = 10/302 (3%)
 Frame = +1

Query: 85  MALFRLLSFPSISHLSTQQCFFYPTNFPSF-PPSILLA--------TSNSISPPRNTLVF 237
           MAL RLL  PS+   ST    F P++ P+F PP    +        T+  +SP R ++  
Sbjct: 1   MALLRLLCSPSLFPSSTH---FPPSSSPTFFPPHSTTSIYSLHSTTTTTFLSPLRISI-- 55

Query: 238 RPQIPTHSILRACSSIQA-QAEIQTPXXXXXXXXXXXXXXXXXXXASRTRLLAQNVPWSC 414
           +PQ P   I    SS Q  Q E ++                    +  TR+LAQN PW+ 
Sbjct: 56  KPQTPYLYISHCSSSTQTPQTENESQEDE----------------SLNTRILAQNTPWAY 99

Query: 415 TASDIRPLFEKYGTVVDVELSMYNKTRNRGLVFVTMGSHEEALAAFNNLDSYEFEGRALN 594
           TA D+RPLF+KYGTV D+E++MYNKTR+RGLVFVTMGSHEEA A   NL++YE EGR L 
Sbjct: 100 TADDLRPLFQKYGTVEDIEVAMYNKTRSRGLVFVTMGSHEEAKAVLENLEAYELEGRPLR 159

Query: 595 MSWAXXXXXXXXXXXXXXXXXXVHNLFVANLPFQARAKDLKEFFNAENANVVSAEIIFHE 774
           ++WA                  VHNLFVANL F+AR+KDL EFF A  ANVVSAE+IF++
Sbjct: 160 LAWAKPKTKKPSSPPRSKPLP-VHNLFVANLHFEARSKDLLEFFKANGANVVSAEVIFND 218

Query: 775 NPRGSAGYGFVSFNTKNEAEAALTAFNGKMFMGRPIRVARSKRFLRQETKASIQSESTSN 954
           NPR SAGYGFVSF TK EA+AAL++ NGK FMGR IRVA SKRFLR ETK +IQ +   +
Sbjct: 219 NPRRSAGYGFVSFTTKAEADAALSSVNGKEFMGRAIRVAHSKRFLRAETKKTIQPQEQPS 278

Query: 955 KL 960
           +L
Sbjct: 279 EL 280