BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00005414
         (498 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH95134.1| HRDC-like protein [Cynara cardunculus var. scolymus]    54   4e-06
gb|PON79985.1| RNA polymerase II, Rpb [Parasponia andersonii]          54   8e-06

>gb|KVH95134.1| HRDC-like protein [Cynara cardunculus var. scolymus]
          Length = 128

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 22/35 (62%), Positives = 31/35 (88%)
 Frame = -1

Query: 315 IVEECDSRMGEDAEELVNMVVQVFPPPPNQTESSE 211
           ++E+ DSR+GE AEELV +V+QVFPPPP+Q++S E
Sbjct: 94  LIEDLDSRLGESAEELVELVLQVFPPPPDQSKSDE 128


>gb|PON79985.1| RNA polymerase II, Rpb [Parasponia andersonii]
          Length = 158

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 20/44 (45%), Positives = 30/44 (68%)
 Frame = -1

Query: 324 VWQIVEECDSRMGEDAEELVNMVVQVFPPPPNQTESSEGVGEDN 193
           ++ ++E+CD R G+  EELV +V +V PPPP +  S EG+ E N
Sbjct: 92  IYSMIEQCDDRFGDTVEELVEIVAEVLPPPPTEIASDEGINEAN 135