BLASTX nr result

ID: Acanthopanax23_contig00005285 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00005285
         (466 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019185109.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    58   9e-07
gb|KVI06292.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal,...    57   2e-06
gb|KZM96606.1| hypothetical protein DCAR_016032 [Daucus carota s...    57   2e-06
ref|XP_017247663.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   2e-06
ref|XP_017247662.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    57   2e-06
emb|CBI14966.3| unnamed protein product, partial [Vitis vinifera]      54   4e-06
ref|XP_021988593.1| DEAD-box ATP-dependent RNA helicase 20-like ...    55   6e-06

>ref|XP_019185109.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1
           [Ipomoea nil]
          Length = 601

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/94 (34%), Positives = 38/94 (40%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPVPXXXXXXXXXXXXX 181
           DYVH                FFTH NAK+AR+L+KILQ+AGQ+VP               
Sbjct: 508 DYVHRIGRTGRAGAKGTAFTFFTHGNAKFARELVKILQQAGQIVPPQLSALACPGGFSSG 567

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 283
                                  NT+PLGAK HW
Sbjct: 568 ASGNNFRSRGRGGFGNRGSISGSNTVPLGAKRHW 601


>gb|KVI06292.1| DNA/RNA helicase, DEAD/DEAH box type, N-terminal, partial [Cynara
           cardunculus var. scolymus]
          Length = 652

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 35/93 (37%), Positives = 39/93 (41%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPVPXXXXXXXXXXXXX 181
           DYVH                FFTHSN+K+AR+LIKILQEAGQVVPV              
Sbjct: 560 DYVHRIGRTGRAGAKGIAITFFTHSNSKHARELIKILQEAGQVVPVALSSMTRSMGPGGG 619

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMH 280
                                  NTIPLG+K H
Sbjct: 620 SGGNFRSRGRGGFGGNRGMISGSNTIPLGSKTH 652


>gb|KZM96606.1| hypothetical protein DCAR_016032 [Daucus carota subsp. sativus]
          Length = 627

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/46 (63%), Positives = 30/46 (65%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPV 139
           DYVH                FFTHSNAK+ARDLIKILQEAGQVVPV
Sbjct: 536 DYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 581


>ref|XP_017247663.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X2
           [Daucus carota subsp. sativus]
          Length = 646

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/46 (63%), Positives = 30/46 (65%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPV 139
           DYVH                FFTHSNAK+ARDLIKILQEAGQVVPV
Sbjct: 555 DYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 600


>ref|XP_017247662.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 isoform X1
           [Daucus carota subsp. sativus]
          Length = 658

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/46 (63%), Positives = 30/46 (65%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPV 139
           DYVH                FFTHSNAK+ARDLIKILQEAGQVVPV
Sbjct: 567 DYVHRIGRTGRAGAKGTAYSFFTHSNAKHARDLIKILQEAGQVVPV 612


>emb|CBI14966.3| unnamed protein product, partial [Vitis vinifera]
          Length = 132

 Score = 53.5 bits (127), Expect = 4e-06
 Identities = 36/95 (37%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVV-PVPXXXXXXXXXXXX 178
           DYVH                FFTHSNAK+ARDLIKILQEAGQVV P              
Sbjct: 38  DYVHRIGRTGRAGAKGTAITFFTHSNAKFARDLIKILQEAGQVVSPALSAMARSSGSAFG 97

Query: 179 XXXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 283
                                   NTIPLGA+  W
Sbjct: 98  GSGGNFRSRGRGGSFGNRGLISGSNTIPLGARRPW 132


>ref|XP_021988593.1| DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Helianthus
           annuus]
          Length = 682

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 34/94 (36%), Positives = 39/94 (41%)
 Frame = +2

Query: 2   DYVHXXXXXXXXXXXXXXXXFFTHSNAKYARDLIKILQEAGQVVPVPXXXXXXXXXXXXX 181
           DYVH                FFTHSNAK+AR+L+KILQEAGQVVPV              
Sbjct: 590 DYVHRIGRTGRAGAKGIAVTFFTHSNAKHARELVKILQEAGQVVPV-ALSSMTRTMGPGA 648

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXNTIPLGAKMHW 283
                                  NT+PLG+  HW
Sbjct: 649 GSGGSFRSRGRGGFGNRGGMSGSNTVPLGSNAHW 682


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