BLASTX nr result

ID: Acanthopanax23_contig00005104 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00005104
         (778 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018515244.1| PREDICTED: uncharacterized protein LOC108872...    61   4e-08
emb|CDY20155.1| BnaA01g28470D [Brassica napus]                         61   4e-08
ref|XP_018846341.1| PREDICTED: uncharacterized protein LOC109010...    60   6e-07
gb|PLY69821.1| hypothetical protein LSAT_6X181 [Lactuca sativa]        56   1e-06
gb|PLY86023.1| hypothetical protein LSAT_3X61181 [Lactuca sativa]      55   9e-06

>ref|XP_018515244.1| PREDICTED: uncharacterized protein LOC108872281 [Brassica rapa]
          Length = 141

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 33/81 (40%), Positives = 45/81 (55%)
 Frame = -3

Query: 485 RMCFCGVTARICVSKKDASRGRRFYGCSNYGESGRYCGYFQWLELPPNEDEASSVMNKSN 306
           + CFCG+ A    S  D + GR FYGCS Y E G  CG+F+W     +E E +    +S 
Sbjct: 18  KFCFCGIPASFTKSWTDKNPGRLFYGCSRYQEQG--CGFFEW----HDEGEVTGWPKRSL 71

Query: 305 IENVDFWIQKNIKLKEKLNNM 243
           IE  D   QKNI++K  +N +
Sbjct: 72  IEARDEIRQKNIEIKRLMNTV 92


>emb|CDY20155.1| BnaA01g28470D [Brassica napus]
          Length = 141

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 33/81 (40%), Positives = 45/81 (55%)
 Frame = -3

Query: 485 RMCFCGVTARICVSKKDASRGRRFYGCSNYGESGRYCGYFQWLELPPNEDEASSVMNKSN 306
           + CFCG+ A    S  D + GR FYGCS Y E G  CG+F+W     +E E +    +S 
Sbjct: 18  KFCFCGIPASFTKSWTDKNPGRLFYGCSRYQEQG--CGFFEW----HDEGEVTGWPKRSL 71

Query: 305 IENVDFWIQKNIKLKEKLNNM 243
           IE  D   QKNI++K  +N +
Sbjct: 72  IEARDEIRQKNIEIKRLMNTV 92


>ref|XP_018846341.1| PREDICTED: uncharacterized protein LOC109010081 [Juglans regia]
          Length = 256

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 30/115 (26%), Positives = 59/115 (51%)
 Frame = -3

Query: 491 EQRMCFCGVTARICVSKKDASRGRRFYGCSNYGESGRYCGYFQWLELPPNEDEASSVMNK 312
           E+ +C+CG  A++ +S+K  S GRRF+ C NY + G+ CG+F+W++L   ++       +
Sbjct: 132 ERPLCYCGCQAKLRISEKSNSFGRRFFNCPNY-KMGKQCGFFEWIDLQKEQNNCCKTALE 190

Query: 311 SNIENVDFWIQKNIKLKEKLNNMITESFKWEMEXXXXXXXXXXXLSWLVTSLVIG 147
                 D  + + ++++E     + + +K  ++           LSWL   +V G
Sbjct: 191 LAERRNDRILNERLRIEESKFKAMEKKYKGVLK--------VLMLSWLFFIVVCG 237


>gb|PLY69821.1| hypothetical protein LSAT_6X181 [Lactuca sativa]
          Length = 101

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
 Frame = -3

Query: 482 MCFCGVTARICVSKKDASRGRRFYGCSNYGESGRYCGYFQWLELP-PNED 336
           +C CGV     +S  D + GR+F GC+NY +  RYC +F WL+ P P+ED
Sbjct: 32  LCRCGVEGSFSISWTDKNHGRKFRGCTNYKDPSRYCKFFMWLDPPLPSED 81


>gb|PLY86023.1| hypothetical protein LSAT_3X61181 [Lactuca sativa]
          Length = 139

 Score = 54.7 bits (130), Expect = 9e-06
 Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
 Frame = -3

Query: 473 CGVTARICVSKKDASRGRRFYGCSNYGESGRYCGYFQWLELP-PNED 336
           CGV A + +S  D + GR+F GC+NY +  RYC +F WL+ P P+ED
Sbjct: 32  CGVEASLSISWTDKNPGRKFRGCTNYKDPSRYCKFFMWLDPPLPSED 78


Top