BLASTX nr result

ID: Acanthopanax23_contig00005080 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00005080
         (827 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN05600.1| hypothetical protein DCAR_006437 [Daucus carota s...   100   2e-20
ref|XP_017235913.1| PREDICTED: double-stranded RNA-binding prote...   100   4e-20
ref|XP_011076987.1| double-stranded RNA-binding protein 2 [Sesam...    62   4e-07
gb|PIN08639.1| hypothetical protein CDL12_18782 [Handroanthus im...    59   3e-06
gb|OVA10136.1| Double-stranded RNA-binding domain [Macleaya cord...    58   6e-06

>gb|KZN05600.1| hypothetical protein DCAR_006437 [Daucus carota subsp. sativus]
          Length = 381

 Score =  100 bits (248), Expect = 2e-20
 Identities = 68/172 (39%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
 Frame = +2

Query: 59  MGIAPPICVRQAVPAFAAPVRTEDS-----------------XXXXXXXXXXXXRVEDSL 187
           MG+APP+ +RQ VPAFAAPVRTEDS                             RVEDSL
Sbjct: 211 MGMAPPVSIRQVVPAFAAPVRTEDSPAFRAPLTQVTACAEDLAAFKAPVSTPSARVEDSL 270

Query: 188 PASKA---PITYPVRVEGSPIFKPPITSVHVRVENPPTSKSLTAPGPIQAENXXXXXXXX 358
           PASK    PIT P + E +P FK      H+ +ENP T+K    P  + AEN        
Sbjct: 271 PASKVTMPPITPPGQEETAPAFKSHAAPAHIHLENPSTAKVPCHPVSVGAENESNLEFSI 330

Query: 359 XXXXVCIENPQTCKALITSPPSSSMPVEETGSAVKAKLPVSLVIQDLKELKV 514
                  E  QT + L   PP  S    ET   V++KLP SL++++L ELKV
Sbjct: 331 KTSTFHAETQQTSE-LSVRPPLVSHMTAETDKEVESKLPESLMVEELNELKV 381


>ref|XP_017235913.1| PREDICTED: double-stranded RNA-binding protein 2-like [Daucus
           carota subsp. sativus]
 ref|XP_017235914.1| PREDICTED: double-stranded RNA-binding protein 2-like [Daucus
           carota subsp. sativus]
          Length = 513

 Score =  100 bits (248), Expect = 4e-20
 Identities = 68/172 (39%), Positives = 84/172 (48%), Gaps = 20/172 (11%)
 Frame = +2

Query: 59  MGIAPPICVRQAVPAFAAPVRTEDS-----------------XXXXXXXXXXXXRVEDSL 187
           MG+APP+ +RQ VPAFAAPVRTEDS                             RVEDSL
Sbjct: 343 MGMAPPVSIRQVVPAFAAPVRTEDSPAFRAPLTQVTACAEDLAAFKAPVSTPSARVEDSL 402

Query: 188 PASKA---PITYPVRVEGSPIFKPPITSVHVRVENPPTSKSLTAPGPIQAENXXXXXXXX 358
           PASK    PIT P + E +P FK      H+ +ENP T+K    P  + AEN        
Sbjct: 403 PASKVTMPPITPPGQEETAPAFKSHAAPAHIHLENPSTAKVPCHPVSVGAENESNLEFSI 462

Query: 359 XXXXVCIENPQTCKALITSPPSSSMPVEETGSAVKAKLPVSLVIQDLKELKV 514
                  E  QT + L   PP  S    ET   V++KLP SL++++L ELKV
Sbjct: 463 KTSTFHAETQQTSE-LSVRPPLVSHMTAETDKEVESKLPESLMVEELNELKV 513


>ref|XP_011076987.1| double-stranded RNA-binding protein 2 [Sesamum indicum]
          Length = 481

 Score = 61.6 bits (148), Expect = 4e-07
 Identities = 61/165 (36%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
 Frame = +2

Query: 59  MGIAPPICVRQAVPAFAAPVRTEDSXXXXXXXXXXXXRVE-------DSLPASKAPITYP 217
           +G+APP+ VRQA+P FAAPVR E+             R+        D  P S+A +   
Sbjct: 329 LGMAPPVSVRQAIPVFAAPVRMEELPIVHPAIKVEDPRLSISTTARADEPPVSRAALG-- 386

Query: 218 VRVEGSPIFKPPITSVHVRVENPPTSK----SLTAPGPIQAENXXXXXXXXXXXXVCIEN 385
            R+E SPI K P     VRVE P + K    S+T    I                V  E+
Sbjct: 387 -RLEDSPIPKVP----SVRVEEPLSFKLLPVSITPNSDIPTVQVDPPSSDALTARV--ES 439

Query: 386 PQTCKALITSPPSSSMPV-EETGSAVKAKLPVSLVIQD-LKELKV 514
           P  CK  +TSPP+SS    EET  AV+ KL     I+D LK+LK+
Sbjct: 440 P-VCK--VTSPPASSKASGEETKIAVQDKLQGPTEIEDFLKDLKI 481


>gb|PIN08639.1| hypothetical protein CDL12_18782 [Handroanthus impetiginosus]
          Length = 471

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 55/164 (33%), Positives = 73/164 (44%), Gaps = 12/164 (7%)
 Frame = +2

Query: 59  MGIAPPICVRQAVPAFAAPVRTED--------SXXXXXXXXXXXXRVEDSLPASKAPITY 214
           +G+APP+CVRQAVP FAAPV  E+                     RVED LP S+A    
Sbjct: 329 LGMAPPVCVRQAVPVFAAPVPGEEQPMVQPAIKIEDPQLSRSTTARVED-LPVSRAA--- 384

Query: 215 PVRVEGSPIFKPPITSVHVRVENPPTSKSLTAPGPIQAENXXXXXXXXXXXXVCIENP-- 388
           P R+E SP  K       V++E P  SK L      + E             V ++ P  
Sbjct: 385 PARLEESPFSK-------VQIEEPLGSKLLAVSVASKTE----------VPAVQVDRPSS 427

Query: 389 QTCKALITSPPS--SSMPVEETGSAVKAKLPVSLVIQDLKELKV 514
           +     + SP S  SS+P     S  + K   S VI+ LK+LK+
Sbjct: 428 EVLAVQVESPASEVSSLPASPNASIEEDKPQESAVIEALKDLKI 471


>gb|OVA10136.1| Double-stranded RNA-binding domain [Macleaya cordata]
          Length = 447

 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 12/163 (7%)
 Frame = +2

Query: 62  GIAPPICVRQAVPAFAAPV------RTEDSXXXXXXXXXXXXRVEDSLPASKAPITYPVR 223
           G+APP+ +R AVP F+AP       R                 +  ++P   AP   PVR
Sbjct: 288 GVAPPVTIRTAVPVFSAPPLPPPAHRPPPLMGPPPVHISPPVCIRQAVPVFAAP---PVR 344

Query: 224 VEGSPIFKPPITSVH--VRVENPPTS--KSLTAPGPIQAE--NXXXXXXXXXXXXVCIEN 385
           +E  P+F  P T     V++E PP S   S  A  PI  E  +            V I  
Sbjct: 345 IEEQPVFPLPSTPAKSPVQIEEPPVSAVPSPPAKSPILVEEVSVSPVPPPPAKSPVQIGE 404

Query: 386 PQTCKALITSPPSSSMPVEETGSAVKAKLPVSLVIQDLKELKV 514
           P       T P  S +P+EE     +     S  IQDL++LK+
Sbjct: 405 PPVSPVPPTLPAKSPVPIEENEKTSEDDRQESSTIQDLEQLKI 447


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