BLASTX nr result

ID: Acanthopanax23_contig00004993 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004993
         (718 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23698.3| unnamed protein product, partial [Vitis vinifera]      50   6e-07

>emb|CBI23698.3| unnamed protein product, partial [Vitis vinifera]
          Length = 388

 Score = 50.4 bits (119), Expect(2) = 6e-07
 Identities = 29/57 (50%), Positives = 37/57 (64%)
 Frame = +1

Query: 109 LFQHLQVNLQVELLGMGIKVMVMVDMVELMGLMEIQLHMVLLEAVLGVAQIAIPLLV 279
           L QHLQVNL  ELLGM IKVM M  MVE+  L +IQL M     V+   ++A+ +L+
Sbjct: 265 LVQHLQVNLLAELLGMEIKVMDMEGMVEVRDLTQIQLVMSYRGVVVATWEVAMVMLM 321



 Score = 31.6 bits (70), Expect(2) = 6e-07
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +2

Query: 353 IMGLKPMDQMVGKLDMVVGTVVLQPDRHSSS 445
           IM L+ M  MVGKL MVV  +VL PD+ SSS
Sbjct: 341 IMELRQMVLMVGKLAMVV-DIVLSPDKPSSS 370


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