BLASTX nr result

ID: Acanthopanax23_contig00004880 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004880
         (575 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017231266.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    61   7e-08
ref|XP_017231265.1| PREDICTED: E3 ubiquitin-protein ligase RNF17...    61   7e-08
ref|XP_017256567.1| PREDICTED: probable cytosolic oligopeptidase...    50   4e-06
gb|KZM91015.1| hypothetical protein DCAR_021620 [Daucus carota s...    50   4e-06
emb|CDP02688.1| unnamed protein product [Coffea canephora]             51   6e-06

>ref|XP_017231266.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2
           [Daucus carota subsp. sativus]
 gb|KZN05857.1| hypothetical protein DCAR_006694 [Daucus carota subsp. sativus]
          Length = 257

 Score = 61.2 bits (147), Expect = 7e-08
 Identities = 29/42 (69%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
 Frame = +1

Query: 190 QGTYEGAT-NALALPLLIKRMFQGLMDPDRFRVNYYTARFVG 312
           QG + G   N LA+P LIKR+FQGLMDPDRFR+NYYTAR  G
Sbjct: 152 QGGFGGLLQNVLAIPFLIKRIFQGLMDPDRFRINYYTARLFG 193


>ref|XP_017231265.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1
           [Daucus carota subsp. sativus]
          Length = 258

 Score = 61.2 bits (147), Expect = 7e-08
 Identities = 29/43 (67%), Positives = 33/43 (76%), Gaps = 2/43 (4%)
 Frame = +1

Query: 190 QGTYEGA--TNALALPLLIKRMFQGLMDPDRFRVNYYTARFVG 312
           QG + G    N LA+P LIKR+FQGLMDPDRFR+NYYTAR  G
Sbjct: 152 QGGFGGLLQVNVLAIPFLIKRIFQGLMDPDRFRINYYTARLFG 194


>ref|XP_017256567.1| PREDICTED: probable cytosolic oligopeptidase A [Daucus carota
           subsp. sativus]
          Length = 726

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
 Frame = +3

Query: 324 PKVMDDIFNLAKMLFEITIEAADGLAPVM---MASYCI 428
           PKVMD +FNLAKMLF + IEAADGLAPV    +  YC+
Sbjct: 394 PKVMDGLFNLAKMLFGVAIEAADGLAPVWNNDVKFYCV 431



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 502 NNNVRLYCRKDSAGSHI 552
           NN+V+ YC KDS+GS I
Sbjct: 423 NNDVKFYCVKDSSGSPI 439


>gb|KZM91015.1| hypothetical protein DCAR_021620 [Daucus carota subsp. sativus]
          Length = 699

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
 Frame = +3

Query: 324 PKVMDDIFNLAKMLFEITIEAADGLAPVM---MASYCI 428
           PKVMD +FNLAKMLF + IEAADGLAPV    +  YC+
Sbjct: 367 PKVMDGLFNLAKMLFGVAIEAADGLAPVWNNDVKFYCV 404



 Score = 27.7 bits (60), Expect(2) = 4e-06
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 502 NNNVRLYCRKDSAGSHI 552
           NN+V+ YC KDS+GS I
Sbjct: 396 NNDVKFYCVKDSSGSPI 412


>emb|CDP02688.1| unnamed protein product [Coffea canephora]
          Length = 884

 Score = 50.8 bits (120), Expect(2) = 6e-06
 Identities = 26/38 (68%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
 Frame = +3

Query: 324 PKVMDDIFNLAKMLFEITIEAADGLAPVM---MASYCI 428
           PKVMD +FNLAKMLF I IEAADGLAPV    +  YC+
Sbjct: 550 PKVMDGLFNLAKMLFGINIEAADGLAPVWNNDVRFYCV 587



 Score = 26.9 bits (58), Expect(2) = 6e-06
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = +1

Query: 502 NNNVRLYCRKDSAGSHI 552
           NN+VR YC  DS+GS I
Sbjct: 579 NNDVRFYCVNDSSGSAI 595


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