BLASTX nr result
ID: Acanthopanax23_contig00004711
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00004711
(677 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI23183.3| unnamed protein product, partial [Vitis vinifera] 77 1e-12
ref|XP_019078215.1| PREDICTED: polyadenylation and cleavage fact... 77 1e-12
ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage fact... 77 1e-12
ref|XP_018837816.1| PREDICTED: polyadenylation and cleavage fact... 73 1e-12
ref|XP_009340948.1| PREDICTED: polyadenylation and cleavage fact... 75 9e-12
ref|XP_015885084.1| PREDICTED: polyadenylation and cleavage fact... 73 3e-11
ref|XP_008384032.1| PREDICTED: polyadenylation and cleavage fact... 73 3e-11
ref|XP_017181547.1| PREDICTED: polyadenylation and cleavage fact... 73 3e-11
ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Popu... 73 4e-11
ref|XP_009357416.1| PREDICTED: polyadenylation and cleavage fact... 73 4e-11
gb|PNT39153.1| hypothetical protein POPTR_004G020300v3 [Populus ... 73 4e-11
ref|XP_006606037.1| PREDICTED: polyadenylation and cleavage fact... 71 2e-10
gb|PON32906.1| RNA polymerase II-binding domain containing prote... 70 2e-10
ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage fact... 70 3e-10
ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage fact... 70 3e-10
gb|KRH35572.1| hypothetical protein GLYMA_10G251100 [Glycine max] 69 5e-10
gb|KRH35570.1| hypothetical protein GLYMA_10G251100 [Glycine max] 69 6e-10
gb|KRH35571.1| hypothetical protein GLYMA_10G251100 [Glycine max] 69 6e-10
ref|XP_017236138.1| PREDICTED: polyadenylation and cleavage fact... 69 6e-10
ref|XP_006589602.1| PREDICTED: polyadenylation and cleavage fact... 69 6e-10
>emb|CBI23183.3| unnamed protein product, partial [Vitis vinifera]
Length = 1003
Score = 77.4 bits (189), Expect = 1e-12
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
G+AAGMDRS LGPIVHAKCRSESNVVSPED ++E G +E+G++ KRMR
Sbjct: 954 GSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1002
>ref|XP_019078215.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Vitis vinifera]
Length = 1033
Score = 77.4 bits (189), Expect = 1e-12
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
G+AAGMDRS LGPIVHAKCRSESNVVSPED ++E G +E+G++ KRMR
Sbjct: 984 GSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1032
>ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Vitis vinifera]
Length = 1046
Score = 77.4 bits (189), Expect = 1e-12
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
G+AAGMDRS LGPIVHAKCRSESNVVSPED ++E G +E+G++ KRMR
Sbjct: 997 GSAAGMDRSQLGPIVHAKCRSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1045
>ref|XP_018837816.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Juglans regia]
Length = 151
Score = 73.2 bits (178), Expect = 1e-12
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 4 TGAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
+G AGMDRS LGPIVHAKCRSES+VVSPED ++E G +G+Q KRMR
Sbjct: 100 SGLTAGMDRSQLGPIVHAKCRSESSVVSPEDFRQDERGITAEGSQSKRMR 149
>ref|XP_009340948.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Pyrus x bretschneideri]
Length = 975
Score = 74.7 bits (182), Expect = 9e-12
Identities = 34/50 (68%), Positives = 41/50 (82%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
GA GMDRS LGPIVHAKCRSESNVVSPE +++ G IE+G+Q KR+R+
Sbjct: 926 GATGGMDRSQLGPIVHAKCRSESNVVSPEGFGQDQGGIIEEGSQRKRLRS 975
>ref|XP_015885084.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Ziziphus
jujuba]
Length = 932
Score = 73.2 bits (178), Expect = 3e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G AGMDRS LGPIVHAKCRSES+VVSPE ++E G E+G+Q KR+RT
Sbjct: 882 GLVAGMDRSQLGPIVHAKCRSESSVVSPEGFGQDEGGITEEGSQRKRLRT 931
>ref|XP_008384032.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Malus domestica]
Length = 976
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
GA GMDRS LGPIVHAKCRSES+VVSPE +++ G IE+G+Q KR+R+
Sbjct: 927 GATGGMDRSQLGPIVHAKCRSESSVVSPEGFGQDQRGIIEEGSQRKRLRS 976
>ref|XP_017181547.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like [Malus
domestica]
Length = 1014
Score = 73.2 bits (178), Expect = 3e-11
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
GA GMDRS LGPIVHAKCRSES+VVSPE +++ G IE+G+Q KR+R+
Sbjct: 965 GATGGMDRSQLGPIVHAKCRSESSVVSPEGFGQDQRGIIEEGSQRKRLRS 1014
>ref|XP_006383938.1| hypothetical protein POPTR_0004s01970g [Populus trichocarpa]
Length = 852
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G+ AGMDRS LGPIVHAKCRS+S+VV PED +E G E+GNQ KRMR+
Sbjct: 803 GSTAGMDRSQLGPIVHAKCRSDSSVVPPEDFGHDEGGNSEEGNQRKRMRS 852
>ref|XP_009357416.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
X1 [Pyrus x bretschneideri]
Length = 975
Score = 72.8 bits (177), Expect = 4e-11
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
GA GMDRS LGPIVHAKCRSES+VVSPE +++ G IE+G+Q KR+R+
Sbjct: 926 GATGGMDRSQLGPIVHAKCRSESSVVSPEGFGQDQGGIIEEGSQRKRLRS 975
>gb|PNT39153.1| hypothetical protein POPTR_004G020300v3 [Populus trichocarpa]
gb|PNT39154.1| hypothetical protein POPTR_004G020300v3 [Populus trichocarpa]
Length = 1034
Score = 72.8 bits (177), Expect = 4e-11
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G+ AGMDRS LGPIVHAKCRS+S+VV PED +E G E+GNQ KRMR+
Sbjct: 985 GSTAGMDRSQLGPIVHAKCRSDSSVVPPEDFGHDEGGNSEEGNQRKRMRS 1034
>ref|XP_006606037.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Glycine max]
gb|KRG91241.1| hypothetical protein GLYMA_20G142500 [Glycine max]
Length = 937
Score = 70.9 bits (172), Expect = 2e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +1
Query: 4 TGAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
TG AGMDR+ LGPI+HAKCRSESN+ + EDL +E G E+G+Q KRMR+
Sbjct: 887 TGTTAGMDRTQLGPIIHAKCRSESNMATSEDLGPDEKGADEEGSQRKRMRS 937
>gb|PON32906.1| RNA polymerase II-binding domain containing protein [Parasponia
andersonii]
Length = 986
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
G+ AGMDRS LG IVHAKCRSES+VV PE ++E G IE+GNQ KR+R
Sbjct: 937 GSTAGMDRSRLGSIVHAKCRSESSVVPPEGFGQDERGAIEEGNQRKRLR 985
>ref|XP_010275999.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Nelumbo nucifera]
Length = 895
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G A MDRS LGPIVHAKCRSES VV PED +E G E+GNQ KRMR+
Sbjct: 846 GPPADMDRSQLGPIVHAKCRSESTVVPPEDFQLDEGGTTEEGNQRKRMRS 895
>ref|XP_010275998.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Nelumbo nucifera]
Length = 1071
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/50 (68%), Positives = 37/50 (74%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G A MDRS LGPIVHAKCRSES VV PED +E G E+GNQ KRMR+
Sbjct: 1022 GPPADMDRSQLGPIVHAKCRSESTVVPPEDFQLDEGGTTEEGNQRKRMRS 1071
>gb|KRH35572.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 614
Score = 69.3 bits (168), Expect = 5e-10
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G AGMDRS LGPI+HAKCRSESN+ + EDL +E G E+G+Q KRMR+
Sbjct: 565 GITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 614
>gb|KRH35570.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 713
Score = 69.3 bits (168), Expect = 6e-10
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G AGMDRS LGPI+HAKCRSESN+ + EDL +E G E+G+Q KRMR+
Sbjct: 664 GITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 713
>gb|KRH35571.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 823
Score = 69.3 bits (168), Expect = 6e-10
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G AGMDRS LGPI+HAKCRSESN+ + EDL +E G E+G+Q KRMR+
Sbjct: 774 GITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 823
>ref|XP_017236138.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
[Daucus carota subsp. sativus]
Length = 922
Score = 69.3 bits (168), Expect = 6e-10
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMR 153
G+ AGMDRS LGPIVH KC+S+SNV + ED KNE + EDG +MKR+R
Sbjct: 873 GSTAGMDRSQLGPIVHTKCKSDSNVTTAEDSRKNEMVYTEDGGRMKRLR 921
>ref|XP_006589602.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
[Glycine max]
gb|KRH35569.1| hypothetical protein GLYMA_10G251100 [Glycine max]
Length = 922
Score = 69.3 bits (168), Expect = 6e-10
Identities = 32/50 (64%), Positives = 39/50 (78%)
Frame = +1
Query: 7 GAAAGMDRSHLGPIVHAKCRSESNVVSPEDLSKNETGFIEDGNQMKRMRT 156
G AGMDRS LGPI+HAKCRSESN+ + EDL +E G E+G+Q KRMR+
Sbjct: 873 GITAGMDRSQLGPIIHAKCRSESNMATSEDLGLDEKGADEEGSQRKRMRS 922