BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004468
         (753 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabi...    60   1e-06

>gb|EXC01499.1| Uncharacterized RNA-binding protein [Morus notabilis]
          Length = 492

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 70/230 (30%), Positives = 92/230 (40%), Gaps = 29/230 (12%)
 Frame = +3

Query: 42  VVDLQVTLLIIQAVLLVTHLNGVG-------AGADHTLLTTVADADHTLLTT-------- 176
           V +LQ TLL+     L +   GV         G DHTLL+T A  +HTL  T        
Sbjct: 224 VDELQATLLVDLLATLQSGGAGVAHPHRWIEVGVDHTLLST-AIGNHTLHITDEGHIPLI 282

Query: 177 VADADHTLHTAVE*GHTHDLAPRTADHQSAGVVGTTPLTIIGTPHLITAIIEAGTA---- 344
           +  ADHTL   V+   T    P TADH  A V GTT L   GT H +  I+E   A    
Sbjct: 283 IRGADHTLLMKVDADPTLGHGPLTADHHCAVVTGTTLLITPGTTHQMIGIMEEDIAPGTI 342

Query: 345 --LSPQVFHQEHTGIHGGATHAASLQGAPPGEDIHLVFPLYGGGAILRACLLLDQGETR- 515
             ++P +      G     T     +   PG    +     G  A + A     QG  + 
Sbjct: 343 PQMAPAMREDIAPGTIPQMTPTMREEDTAPGSIPQMRLTTRGSIATVPAVSRQGQGGAQE 402

Query: 516 GVSPAALHTSVDIPG----KAFLLGAEVLVHLPDL---FQGPRAKVLVHL 644
           G + A  H  +++ G     AFLL  E     P +   F G +    VHL
Sbjct: 403 GATHAVSHLDLEVQGGFIYGAFLLMGEAQAVAPQVLLQFVGAQGLAKVHL 452