BLASTX nr result

ID: Acanthopanax23_contig00004458 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004458
         (769 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017222675.1| PREDICTED: regulator of nonsense transcripts...    79   5e-13
gb|POF19350.1| regulator of nonsense transcripts upf2 [Quercus s...    74   1e-12
gb|POF19349.1| regulator of nonsense transcripts upf2 [Quercus s...    74   4e-11
ref|XP_023905779.1| regulator of nonsense transcripts UPF2 isofo...    74   4e-11
ref|XP_010067251.1| PREDICTED: regulator of nonsense transcripts...    70   6e-10
ref|XP_010067250.1| PREDICTED: regulator of nonsense transcripts...    70   6e-10
gb|KCW65350.1| hypothetical protein EUGRSUZ_G02792 [Eucalyptus g...    70   6e-10
gb|PLY68920.1| hypothetical protein LSAT_2X116140 [Lactuca sativa]     65   2e-09
ref|XP_010319853.1| PREDICTED: regulator of nonsense transcripts...    67   5e-09
ref|XP_010319848.1| PREDICTED: regulator of nonsense transcripts...    67   5e-09
ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts...    67   7e-09
ref|XP_015877096.1| PREDICTED: regulator of nonsense transcripts...    67   9e-09
ref|XP_024189948.1| regulator of nonsense transcripts UPF2 [Rosa...    67   9e-09
gb|PHT32056.1| Regulator of nonsense transcripts UPF2 [Capsicum ...    65   1e-08
ref|XP_022006547.1| regulator of nonsense transcripts UPF2-like ...    66   1e-08
ref|XP_009778348.1| PREDICTED: regulator of nonsense transcripts...    66   1e-08
ref|XP_018828741.1| PREDICTED: regulator of nonsense transcripts...    66   1e-08
ref|XP_016547104.1| PREDICTED: regulator of nonsense transcripts...    66   1e-08
ref|XP_019231908.1| PREDICTED: regulator of nonsense transcripts...    66   1e-08
gb|OIT28399.1| regulator of nonsense transcripts upf2 [Nicotiana...    66   1e-08

>ref|XP_017222675.1| PREDICTED: regulator of nonsense transcripts UPF2 [Daucus carota
            subsp. sativus]
 gb|KZM84893.1| hypothetical protein DCAR_027685 [Daucus carota subsp. sativus]
          Length = 1193

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 38/66 (57%), Positives = 41/66 (62%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLGNQ +SWIQ GGGR SSRGH W+                     
Sbjct: 1128 LVLEYNDREEEELNGLGNQPNSWIQSGGGRASSRGHAWDGHGGRGAGSRHRYHHHSGGGI 1187

Query: 182  YYSRRR 199
            +YSRRR
Sbjct: 1188 FYSRRR 1193


>gb|POF19350.1| regulator of nonsense transcripts upf2 [Quercus suber]
          Length = 144

 Score = 73.6 bits (179), Expect = 1e-12
 Identities = 36/66 (54%), Positives = 40/66 (60%)
 Frame = +2

Query: 2   LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
           LVLEYNDREEEELNGLG Q  +W QGGG RV+SRG+TWE                     
Sbjct: 79  LVLEYNDREEEELNGLGTQTINWSQGGGSRVASRGNTWEGTGSRASGSRHRHHNYSGGGV 138

Query: 182 YYSRRR 199
           YYSR+R
Sbjct: 139 YYSRKR 144


>gb|POF19349.1| regulator of nonsense transcripts upf2 [Quercus suber]
          Length = 1216

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 36/66 (54%), Positives = 40/66 (60%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLG Q  +W QGGG RV+SRG+TWE                     
Sbjct: 1151 LVLEYNDREEEELNGLGTQTINWSQGGGSRVASRGNTWEGTGSRASGSRHRHHNYSGGGV 1210

Query: 182  YYSRRR 199
            YYSR+R
Sbjct: 1211 YYSRKR 1216


>ref|XP_023905779.1| regulator of nonsense transcripts UPF2 isoform X1 [Quercus suber]
 ref|XP_023905780.1| regulator of nonsense transcripts UPF2 isoform X2 [Quercus suber]
          Length = 1219

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 36/66 (54%), Positives = 40/66 (60%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLG Q  +W QGGG RV+SRG+TWE                     
Sbjct: 1154 LVLEYNDREEEELNGLGTQTINWSQGGGSRVASRGNTWEGTGSRASGSRHRHHNYSGGGV 1213

Query: 182  YYSRRR 199
            YYSR+R
Sbjct: 1214 YYSRKR 1219


>ref|XP_010067251.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X2
            [Eucalyptus grandis]
          Length = 1115

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 35/66 (53%), Positives = 39/66 (59%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLGNQ+ +W Q G GRV SRG+ WE                     
Sbjct: 1050 LVLEYNDREEEELNGLGNQSLNWSQSGAGRVISRGNNWEAGGGRTVGTRHRHLNYPGGGG 1109

Query: 182  YYSRRR 199
            YYSR+R
Sbjct: 1110 YYSRKR 1115


>ref|XP_010067250.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1
            [Eucalyptus grandis]
 gb|KCW65351.1| hypothetical protein EUGRSUZ_G02792 [Eucalyptus grandis]
          Length = 1198

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 35/66 (53%), Positives = 39/66 (59%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLGNQ+ +W Q G GRV SRG+ WE                     
Sbjct: 1133 LVLEYNDREEEELNGLGNQSLNWSQSGAGRVISRGNNWEAGGGRTVGTRHRHLNYPGGGG 1192

Query: 182  YYSRRR 199
            YYSR+R
Sbjct: 1193 YYSRKR 1198


>gb|KCW65350.1| hypothetical protein EUGRSUZ_G02792 [Eucalyptus grandis]
          Length = 1199

 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 35/66 (53%), Positives = 39/66 (59%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLGNQ+ +W Q G GRV SRG+ WE                     
Sbjct: 1134 LVLEYNDREEEELNGLGNQSLNWSQSGAGRVISRGNNWEAGGGRTVGTRHRHLNYPGGGG 1193

Query: 182  YYSRRR 199
            YYSR+R
Sbjct: 1194 YYSRKR 1199


>gb|PLY68920.1| hypothetical protein LSAT_2X116140 [Lactuca sativa]
          Length = 146

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 34/66 (51%), Positives = 37/66 (56%)
 Frame = +2

Query: 2   LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
           LVLEYNDREEEELN LGN    W Q GGGRV  RGH+WE                    +
Sbjct: 82  LVLEYNDREEEELNALGNLPVGWSQSGGGRVVYRGHSWE-GHGGRSGSRHRYPHHTGGGY 140

Query: 182 YYSRRR 199
           YYSRR+
Sbjct: 141 YYSRRK 146


>ref|XP_010319853.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X2 [Solanum
            lycopersicum]
          Length = 1125

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ SSW Q  G RV+ RG TW+
Sbjct: 1061 LVLEYNDREEEELNGLGNQPSSWTQSSGSRVAHRGSTWD 1099


>ref|XP_010319848.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Solanum
            lycopersicum]
 ref|XP_010319849.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Solanum
            lycopersicum]
 ref|XP_010319850.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Solanum
            lycopersicum]
 ref|XP_010319851.1| PREDICTED: regulator of nonsense transcripts UPF2 isoform X1 [Solanum
            lycopersicum]
          Length = 1198

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 30/39 (76%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ SSW Q  G RV+ RG TW+
Sbjct: 1134 LVLEYNDREEEELNGLGNQPSSWTQSSGSRVAHRGSTWD 1172


>ref|XP_006340545.1| PREDICTED: regulator of nonsense transcripts UPF2 [Solanum tuberosum]
 ref|XP_006340546.1| PREDICTED: regulator of nonsense transcripts UPF2 [Solanum tuberosum]
 ref|XP_006340547.1| PREDICTED: regulator of nonsense transcripts UPF2 [Solanum tuberosum]
          Length = 1197

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 30/39 (76%), Positives = 31/39 (79%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ  SW Q  G RVS RG TW+
Sbjct: 1133 LVLEYNDREEEELNGLGNQPPSWTQSSGSRVSQRGSTWD 1171


>ref|XP_015877096.1| PREDICTED: regulator of nonsense transcripts UPF2 [Ziziphus jujuba]
          Length = 1172

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLG Q  +++Q GG R+S RGHTWE
Sbjct: 1108 LVLEYNDREEEELNGLGTQTLNYMQTGGNRISGRGHTWE 1146


>ref|XP_024189948.1| regulator of nonsense transcripts UPF2 [Rosa chinensis]
 gb|PRQ44765.1| putative up-frameshift suppressor 2 [Rosa chinensis]
          Length = 1191

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 33/66 (50%), Positives = 37/66 (56%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLGNQ  ++ Q GG R + RG TWE                     
Sbjct: 1126 LVLEYNDREEEELNGLGNQTMNYAQSGGNRFAGRGSTWEGTSSRGGGPRRYHSSYSGAGV 1185

Query: 182  YYSRRR 199
            YYSRR+
Sbjct: 1186 YYSRRK 1191


>gb|PHT32056.1| Regulator of nonsense transcripts UPF2 [Capsicum baccatum]
          Length = 242

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/39 (71%), Positives = 31/39 (79%)
 Frame = +2

Query: 2   LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
           LVLEYNDREEEELNG GNQ  SW Q  G RV+ RG+TW+
Sbjct: 159 LVLEYNDREEEELNGFGNQPPSWTQSSGSRVAHRGNTWD 197


>ref|XP_022006547.1| regulator of nonsense transcripts UPF2-like [Helianthus annuus]
 ref|XP_022006548.1| regulator of nonsense transcripts UPF2-like [Helianthus annuus]
 gb|OTF99832.1| putative up-frameshift suppressor 2, Armadillo-type fold protein
            [Helianthus annuus]
          Length = 1176

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 34/66 (51%), Positives = 38/66 (57%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELN LGN  + W Q GGGRV  RGH+WE                    +
Sbjct: 1112 LVLEYNDREEEELNALGNLPAGWSQSGGGRVVYRGHSWE-GHGGRSGSRHRYPHHSGGGY 1170

Query: 182  YYSRRR 199
            YYSRR+
Sbjct: 1171 YYSRRK 1176


>ref|XP_009778348.1| PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana
            sylvestris]
 ref|XP_009778349.1| PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana
            sylvestris]
 ref|XP_016515866.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana
            tabacum]
 ref|XP_016515867.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana
            tabacum]
 ref|XP_016515869.1| PREDICTED: regulator of nonsense transcripts UPF2-like [Nicotiana
            tabacum]
          Length = 1191

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ  SW Q  G RV+ RG+TW+
Sbjct: 1127 LVLEYNDREEEELNGLGNQPPSWTQNSGSRVAHRGNTWD 1165


>ref|XP_018828741.1| PREDICTED: regulator of nonsense transcripts UPF2 [Juglans regia]
          Length = 1195

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 32/66 (48%), Positives = 37/66 (56%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWEXXXXXXXXXXXXXXXXXXXXF 181
            LVLEYNDREEEELNGLG Q  +W  G G R SSRG+TW+                     
Sbjct: 1130 LVLEYNDREEEELNGLGTQTMNWSHGAGNRGSSRGNTWDGTGTRASGSRHRHHNYSGSGL 1189

Query: 182  YYSRRR 199
            YYSR++
Sbjct: 1190 YYSRKK 1195


>ref|XP_016547104.1| PREDICTED: regulator of nonsense transcripts UPF2 [Capsicum annuum]
 ref|XP_016547106.1| PREDICTED: regulator of nonsense transcripts UPF2 [Capsicum annuum]
          Length = 1195

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ  SW Q  G RV+ RG+TW+
Sbjct: 1131 LVLEYNDREEEELNGLGNQPPSWTQSSGSRVAHRGNTWD 1169


>ref|XP_019231908.1| PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana
            attenuata]
 ref|XP_019231910.1| PREDICTED: regulator of nonsense transcripts UPF2 [Nicotiana
            attenuata]
          Length = 1196

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ  SW Q  G RV+ RG+TW+
Sbjct: 1132 LVLEYNDREEEELNGLGNQPPSWTQNSGSRVAHRGNTWD 1170


>gb|OIT28399.1| regulator of nonsense transcripts upf2 [Nicotiana attenuata]
          Length = 1200

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 32/39 (82%)
 Frame = +2

Query: 2    LVLEYNDREEEELNGLGNQASSWIQGGGGRVSSRGHTWE 118
            LVLEYNDREEEELNGLGNQ  SW Q  G RV+ RG+TW+
Sbjct: 1136 LVLEYNDREEEELNGLGNQPPSWTQNSGSRVAHRGNTWD 1174


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