BLASTX nr result
ID: Acanthopanax23_contig00004357
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00004357
(407 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019244088.1| PREDICTED: protein PAF1 homolog [Nicotiana a... 103 7e-23
ref|XP_016443081.1| PREDICTED: protein PAF1 homolog [Nicotiana t... 103 7e-23
ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated fact... 103 7e-23
ref|XP_009608739.1| PREDICTED: protein PAF1 homolog [Nicotiana t... 103 7e-23
ref|XP_017253265.1| PREDICTED: protein PAF1 homolog [Daucus caro... 103 7e-23
emb|CDO97975.1| unnamed protein product [Coffea canephora] 102 1e-22
ref|XP_018843272.1| PREDICTED: protein PAF1 homolog [Juglans regia] 98 4e-21
ref|XP_015070611.1| PREDICTED: protein PAF1 homolog [Solanum pen... 94 9e-20
ref|XP_011080439.1| protein PAF1 homolog [Sesamum indicum] 94 9e-20
ref|XP_004235642.1| PREDICTED: protein PAF1 homolog [Solanum lyc... 94 9e-20
ref|XP_006343037.1| PREDICTED: protein PAF1 homolog [Solanum tub... 94 9e-20
ref|XP_019194433.1| PREDICTED: protein PAF1 homolog [Ipomoea nil] 94 1e-19
gb|PHT47055.1| Protein PAF1 -like protein [Capsicum baccatum] >g... 94 2e-19
ref|XP_016562646.1| PREDICTED: protein PAF1 homolog [Capsicum an... 94 2e-19
ref|XP_010256861.1| PREDICTED: protein PAF1 homolog [Nelumbo nuc... 92 8e-19
emb|CBI36059.3| unnamed protein product, partial [Vitis vinifera] 91 9e-19
ref|XP_021834711.1| protein PAF1 homolog [Prunus avium] 91 1e-18
gb|OMO66541.1| RNA polymerase II-associated, Paf1 [Corchorus oli... 91 1e-18
ref|XP_022715033.1| protein PAF1 homolog [Durio zibethinus] 91 1e-18
ref|XP_002278075.3| PREDICTED: protein PAF1 homolog [Vitis vinif... 91 1e-18
>ref|XP_019244088.1| PREDICTED: protein PAF1 homolog [Nicotiana attenuata]
gb|OIT05265.1| protein paf1-like protein [Nicotiana attenuata]
Length = 656
Score = 103 bits (256), Expect = 7e-23
Identities = 57/95 (60%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVRRR V+A+ELKE GY + + S+S
Sbjct: 562 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYATASKGGVSSS 621
Query: 228 KRQRV-DNGSPSRQREVMQDADMDQSSGAEYDMSD 127
+R R D + Q+ M D D DQSSGAEYDMSD
Sbjct: 622 RRARTNDEDAVGEQQNDMHDGDQDQSSGAEYDMSD 656
>ref|XP_016443081.1| PREDICTED: protein PAF1 homolog [Nicotiana tabacum]
Length = 656
Score = 103 bits (256), Expect = 7e-23
Identities = 57/95 (60%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVRRR V+A+ELKE GY + + S+S
Sbjct: 562 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYATASKGGVSSS 621
Query: 228 KRQRV-DNGSPSRQREVMQDADMDQSSGAEYDMSD 127
+R R D + Q+ M D D DQSSGAEYDMSD
Sbjct: 622 RRARTNDEDAVGEQQNDMHDGDQDQSSGAEYDMSD 656
>ref|XP_009786773.1| PREDICTED: RNA polymerase II-associated factor 1 homolog [Nicotiana
sylvestris]
ref|XP_016509112.1| PREDICTED: protein PAF1 homolog [Nicotiana tabacum]
Length = 656
Score = 103 bits (256), Expect = 7e-23
Identities = 57/95 (60%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVRRR V+A+ELKE GY + + S+S
Sbjct: 562 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYTTASKGGVSSS 621
Query: 228 KRQRV-DNGSPSRQREVMQDADMDQSSGAEYDMSD 127
+R R D + Q+ M D D DQSSGAEYDMSD
Sbjct: 622 RRARTNDEDAVGEQQNDMHDGDQDQSSGAEYDMSD 656
>ref|XP_009608739.1| PREDICTED: protein PAF1 homolog [Nicotiana tomentosiformis]
Length = 656
Score = 103 bits (256), Expect = 7e-23
Identities = 57/95 (60%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVRRR V+A+ELKE GY + + S+S
Sbjct: 562 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRRRKTVAAIELKEEGGYATASKGGVSSS 621
Query: 228 KRQRV-DNGSPSRQREVMQDADMDQSSGAEYDMSD 127
+R R D + Q+ M D D DQSSGAEYDMSD
Sbjct: 622 RRARTNDEDAVGEQQNDMHDGDQDQSSGAEYDMSD 656
>ref|XP_017253265.1| PREDICTED: protein PAF1 homolog [Daucus carota subsp. sativus]
ref|XP_017253266.1| PREDICTED: protein PAF1 homolog [Daucus carota subsp. sativus]
ref|XP_017253267.1| PREDICTED: protein PAF1 homolog [Daucus carota subsp. sativus]
gb|KZM92943.1| hypothetical protein DCAR_016188 [Daucus carota subsp. sativus]
Length = 687
Score = 103 bits (256), Expect = 7e-23
Identities = 57/93 (61%), Positives = 68/93 (73%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LP KLV RKKRA EGKS+DE+E+F AP+ VTVR R+ VS E+ E + YSG R SAS SK
Sbjct: 594 LPAKLVMRKKRAREGKSTDEIEHFPAPSAVTVRWRADVSVGEVIESKSYSGARGSASTSK 653
Query: 225 RQRVDNGSPSRQREVMQDADMDQSSGAEYDMSD 127
RQR+ NGS SRQR V + D SSGAE D++D
Sbjct: 654 RQRIYNGSTSRQRNVSHH-ERDYSSGAEDDLND 685
>emb|CDO97975.1| unnamed protein product [Coffea canephora]
Length = 706
Score = 102 bits (255), Expect = 1e-22
Identities = 56/95 (58%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL+ RKKRA EGKSS+EVE+F P+R+TVR+RS V+A+ELKE+ GYS + S SK
Sbjct: 613 LPTKLILRKKRAREGKSSEEVEHFPVPSRLTVRKRSTVAAIELKEVGGYSASKGSGFNSK 672
Query: 225 RQRVD--NGSPSRQREVMQDADMDQSSGAEYDMSD 127
R R+D +G Q+ V D + DQSSG EYDMSD
Sbjct: 673 RARLDMEDGLGQSQKSV-DDMEPDQSSGGEYDMSD 706
>ref|XP_018843272.1| PREDICTED: protein PAF1 homolog [Juglans regia]
Length = 734
Score = 98.2 bits (243), Expect = 4e-21
Identities = 56/94 (59%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKLV RKKRA EG+SSDEVEYF P+RVTVRRRS V+AVEL++ YS + S S SK
Sbjct: 641 LPTKLVLRKKRAKEGRSSDEVEYFPVPSRVTVRRRSAVAAVELRDSEVYSNSKGSFSNSK 700
Query: 225 RQRVD-NGSPSRQREVMQDADMDQSSGAEYDMSD 127
R +D R ++V + D+DQSSGAE +MSD
Sbjct: 701 RGGLDIEDGLGRPQKVARHQDIDQSSGAEDEMSD 734
>ref|XP_015070611.1| PREDICTED: protein PAF1 homolog [Solanum pennellii]
Length = 698
Score = 94.4 bits (233), Expect = 9e-20
Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS++EVE+F P+RVTVR+R +A+ELKE GY + ++ + S+S
Sbjct: 604 LPTKLVLRKKRAREGKSNEEVEHFPVPSRVTVRKRPTAAAIELKEEGGYTTALKGNVSSS 663
Query: 228 KRQRVDN-GSPSRQREVMQDADMDQSSGAEYDMSD 127
KR R+ + Q M D D DQSSG EY MSD
Sbjct: 664 KRSRISHEDDVGEQHNNMHDDDQDQSSGGEYYMSD 698
>ref|XP_011080439.1| protein PAF1 homolog [Sesamum indicum]
Length = 698
Score = 94.4 bits (233), Expect = 9e-20
Identities = 52/93 (55%), Positives = 63/93 (67%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL+ RKKRA EGKS DEVE+F AP RVTVRRRS +AVEL+E Y ++S
Sbjct: 606 LPTKLILRKKRAREGKSGDEVEHFPAPKRVTVRRRSTAAAVELREEGDYVASKSSNRGRS 665
Query: 225 RQRVDNGSPSRQREVMQDADMDQSSGAEYDMSD 127
+ +GS R R ++QDAD D SGAE DMS+
Sbjct: 666 GRGGMDGSDGRLRRIVQDADADNYSGAEDDMSE 698
>ref|XP_004235642.1| PREDICTED: protein PAF1 homolog [Solanum lycopersicum]
Length = 698
Score = 94.4 bits (233), Expect = 9e-20
Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS++EVE+F P+RVTVR+R +A+ELKE GY + ++ + S+S
Sbjct: 604 LPTKLVLRKKRAREGKSNEEVEHFPVPSRVTVRKRPTAAAIELKEEGGYTTALKGNVSSS 663
Query: 228 KRQRVDN-GSPSRQREVMQDADMDQSSGAEYDMSD 127
KR R+ + Q M D D DQSSG EY MSD
Sbjct: 664 KRSRISHEDDVGEQHNNMHDDDQDQSSGGEYYMSD 698
>ref|XP_006343037.1| PREDICTED: protein PAF1 homolog [Solanum tuberosum]
Length = 700
Score = 94.4 bits (233), Expect = 9e-20
Identities = 52/95 (54%), Positives = 66/95 (69%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS++EVE+F P+RVTVR+R +A+ELKE GY + ++ + S+S
Sbjct: 606 LPTKLVLRKKRAREGKSNEEVEHFPVPSRVTVRKRPTAAAIELKEEGGYTTALKGNVSSS 665
Query: 228 KRQRVDN-GSPSRQREVMQDADMDQSSGAEYDMSD 127
KR R+ + Q M D D DQSSG EY MSD
Sbjct: 666 KRSRISHEDDVGEQHNNMHDDDQDQSSGGEYYMSD 700
>ref|XP_019194433.1| PREDICTED: protein PAF1 homolog [Ipomoea nil]
Length = 690
Score = 94.0 bits (232), Expect = 1e-19
Identities = 50/93 (53%), Positives = 60/93 (64%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
+PTKL RKKRA EGKS++EVE F PARVTVR R V +ELK+ GYS + S S SK
Sbjct: 598 VPTKLSLRKKRAREGKSNEEVEQFPIPARVTVRNRQTVDVIELKDEGGYSSFKGSGSDSK 657
Query: 225 RQRVDNGSPSRQREVMQDADMDQSSGAEYDMSD 127
R R+ + M D D DQSSG EY++SD
Sbjct: 658 RSRMSLEDGLHSEKGMHDTDEDQSSGGEYELSD 690
>gb|PHT47055.1| Protein PAF1 -like protein [Capsicum baccatum]
gb|PHT88924.1| Protein PAF1 -like protein [Capsicum annuum]
gb|PHU24826.1| Protein PAF1 -like protein [Capsicum chinense]
Length = 674
Score = 93.6 bits (231), Expect = 2e-19
Identities = 55/95 (57%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVR+R V+A+ELKE GY + ++ S S+S
Sbjct: 581 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRKRPTVAAIELKEEGGYTTALKGSVSSS 640
Query: 228 KRQRVDN-GSPSRQREVMQDADMDQSSGAEYDMSD 127
KR R+ + + Q M D D DQSSG EY MSD
Sbjct: 641 KRTRIGHEDAVDEQLLDMHDGDQDQSSGGEY-MSD 674
>ref|XP_016562646.1| PREDICTED: protein PAF1 homolog [Capsicum annuum]
Length = 674
Score = 93.6 bits (231), Expect = 2e-19
Identities = 55/95 (57%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGY-SGVRASASAS 229
LPTKLV RKKRA EGKS+DEVE+F P+RVTVR+R V+A+ELKE GY + ++ S S+S
Sbjct: 581 LPTKLVLRKKRAREGKSNDEVEHFPVPSRVTVRKRPTVAAIELKEEGGYTTALKGSVSSS 640
Query: 228 KRQRVDN-GSPSRQREVMQDADMDQSSGAEYDMSD 127
KR R+ + + Q M D D DQSSG EY MSD
Sbjct: 641 KRTRIGHEDAVDEQLLDMHDGDQDQSSGGEY-MSD 674
>ref|XP_010256861.1| PREDICTED: protein PAF1 homolog [Nelumbo nucifera]
ref|XP_010256862.1| PREDICTED: protein PAF1 homolog [Nelumbo nucifera]
ref|XP_010256863.1| PREDICTED: protein PAF1 homolog [Nelumbo nucifera]
Length = 734
Score = 91.7 bits (226), Expect = 8e-19
Identities = 50/95 (52%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKLV RKKRA EG+SSDE+E++ P+RVTVR R +V+ +E++E GY +A S+SK
Sbjct: 640 LPTKLVLRKKRAKEGRSSDEIEHYPIPSRVTVRCRPEVAVIEVQESGGYENFKAGISSSK 699
Query: 225 RQRV--DNGSPSRQREVMQDADMDQSSGAEYDMSD 127
R R+ D+G + DMD SSGAE DMSD
Sbjct: 700 RGRLTTDDGLVRHNKGARVQDDMDHSSGAEDDMSD 734
>emb|CBI36059.3| unnamed protein product, partial [Vitis vinifera]
Length = 420
Score = 90.9 bits (224), Expect = 9e-19
Identities = 50/93 (53%), Positives = 64/93 (68%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL+ RKKRA EG+SSDEVE+F P++VTVR+R V+A+ELK+ YS + S+SK
Sbjct: 328 LPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTVRQRPNVAAIELKDEEVYSSSKRGVSSSK 387
Query: 225 RQRVDNGSPSRQREVMQDADMDQSSGAEYDMSD 127
R R + +QD MDQSSGAE +MSD
Sbjct: 388 RGVDMEDGLGRSYKGVQDQHMDQSSGAEDEMSD 420
>ref|XP_021834711.1| protein PAF1 homolog [Prunus avium]
Length = 681
Score = 91.3 bits (225), Expect = 1e-18
Identities = 51/94 (54%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKLV RKKR+ EGK+SDEVE+F AP+RVT+R+RS V+A+ELK+ Y +R S S K
Sbjct: 590 LPTKLVLRKKRSKEGKTSDEVEHFPAPSRVTIRQRSTVAAIELKDSGDY--LRGSVSNLK 647
Query: 225 RQRVD-NGSPSRQREVMQDADMDQSSGAEYDMSD 127
+R D + R R++ + D+D+SSGAE D+SD
Sbjct: 648 TRRFDVEDTLERPRKIARHQDIDESSGAEDDLSD 681
>gb|OMO66541.1| RNA polymerase II-associated, Paf1 [Corchorus olitorius]
Length = 575
Score = 90.9 bits (224), Expect = 1e-18
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL RKKRA EG+S DE+E+F PAR+TVRRRS V+A+ELKE YS R S+SK
Sbjct: 482 LPTKLNLRKKRAREGRSGDEIEHFPIPARITVRRRSTVAAIELKEPEVYSNSRGGISSSK 541
Query: 225 RQRVD-NGSPSRQREVMQDADMDQSSGAEYDMSD 127
R+D R ++ + D+DQ SGAE D+SD
Sbjct: 542 VGRLDAEDGLGRPHKLARHQDVDQYSGAEDDLSD 575
>ref|XP_022715033.1| protein PAF1 homolog [Durio zibethinus]
Length = 677
Score = 90.9 bits (224), Expect = 1e-18
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL RKKRA EG+S DE+E+F P+R+TVRRRS V+A+ELKE YS R S+SK
Sbjct: 584 LPTKLNLRKKRAREGRSGDEIEHFPIPSRITVRRRSTVAAIELKEPEVYSNSRGGISSSK 643
Query: 225 RQRVD-NGSPSRQREVMQDADMDQSSGAEYDMSD 127
R+D R +++ + D+DQ SGAE D+SD
Sbjct: 644 MGRLDAEDDLGRPQKLARHQDIDQYSGAEDDLSD 677
>ref|XP_002278075.3| PREDICTED: protein PAF1 homolog [Vitis vinifera]
Length = 702
Score = 90.9 bits (224), Expect = 1e-18
Identities = 50/93 (53%), Positives = 64/93 (68%)
Frame = -3
Query: 405 LPTKLVSRKKRAIEGKSSDEVEYFLAPARVTVRRRSKVSAVELKEIRGYSGVRASASASK 226
LPTKL+ RKKRA EG+SSDEVE+F P++VTVR+R V+A+ELK+ YS + S+SK
Sbjct: 610 LPTKLLLRKKRAKEGRSSDEVEHFPVPSKVTVRQRPNVAAIELKDEEVYSSSKRGVSSSK 669
Query: 225 RQRVDNGSPSRQREVMQDADMDQSSGAEYDMSD 127
R R + +QD MDQSSGAE +MSD
Sbjct: 670 RGVDMEDGLGRSYKGVQDQHMDQSSGAEDEMSD 702