BLASTX nr result

ID: Acanthopanax23_contig00004160 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00004160
         (1095 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_018845455.1| PREDICTED: midasin-like [Juglans regia] >gi|...    67   2e-08
ref|XP_021687316.1| neurofilament medium polypeptide-like [Hevea...    64   1e-07
ref|XP_023891378.1| uncharacterized protein LOC112003423 [Quercu...    63   3e-07
gb|PON72584.1| hypothetical protein TorRG33x02_251610 [Trema ori...    61   1e-06

>ref|XP_018845455.1| PREDICTED: midasin-like [Juglans regia]
 ref|XP_018845456.1| PREDICTED: midasin-like [Juglans regia]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 67/225 (29%), Positives = 95/225 (42%), Gaps = 9/225 (4%)
 Frame = -2

Query: 1094 SKGFKVKHTXXXXXXXXXXXXXLYQVKQTYGKRSALGKTSRGM-EKLGNGHGILKLGRKG 918
            SKGFKVKH              LYQVK ++ ++ A  + S  + EK+ +GH I+KLGRK 
Sbjct: 12   SKGFKVKHAIQICLLLAICIWLLYQVKHSHERKKASEENSSKISEKMQSGHEIIKLGRKD 71

Query: 917  LDPQMEEIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGVGDDEIDGHXXXXXXXXXXX 738
            L P+ EE                               RG GDDE+DGH           
Sbjct: 72   LHPREEE--------TERKEELEQVIEEIKPEENEDEGRGSGDDEMDGH-------QQGR 116

Query: 737  XXXXXXXXXXXXXXXXXXXXXXGNVEMDSFG-----ENVGLINIQHRSGVRRNTEEGKEE 573
                                  G+ E+DS G     E+V     + +  V+RNT+E +EE
Sbjct: 117  VEEEESEEVDDLIDEEDREREGGSEELDSEGNGNQIEDVSFFEDEAQIEVQRNTQEAREE 176

Query: 572  HYRGDIDTE---HNTQLISEKETGILAAKNEVDWEDKNRT*EVNQ 447
            +Y+GD  +     N++ IS  E G L    E + ED  ++ EV+Q
Sbjct: 177  NYKGDDASSAVMQNSRTIS-TEIGGLRKVKEQEIEDTEKS-EVDQ 219


>ref|XP_021687316.1| neurofilament medium polypeptide-like [Hevea brasiliensis]
 ref|XP_021687317.1| neurofilament medium polypeptide-like [Hevea brasiliensis]
          Length = 333

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 57/196 (29%), Positives = 78/196 (39%), Gaps = 4/196 (2%)
 Frame = -2

Query: 1094 SKGFKVKHTXXXXXXXXXXXXXLYQVKQTYGKRSALG-KTSRGMEKLGNGHGILKLGRKG 918
            SKGFKVKH              L Q+K +Y K+ A    T   +EK+ + H I+KLGRK 
Sbjct: 12   SKGFKVKHFLQICLLLAICIWLLNQLKHSYDKKKAYDDSTVNILEKVQSEHEIIKLGRKD 71

Query: 917  LDPQMEEIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGVGDDEIDGHXXXXXXXXXXX 738
            L P+++E A                             RG GDDEIDGH           
Sbjct: 72   LLPRVDE-ATLEGESHGDKAELEEDIEELKADDIDDDGRGGGDDEIDGH--DQERAEEEE 128

Query: 737  XXXXXXXXXXXXXXXXXXXXXXGNVEMDSFGENVGLINIQHRSGVRRNTEEGKEEHYRGD 558
                                   + EM    E+ G IN Q ++   +N+ E +EEH++GD
Sbjct: 129  SEEVEDLIDVDDRERDVGNEEQDSEEMGDQLEDFGSINHQAQNEGEKNSREAREEHHKGD 188

Query: 557  ---IDTEHNTQLISEK 519
                   HNTQ +S +
Sbjct: 189  DASSSVVHNTQTLSSE 204


>ref|XP_023891378.1| uncharacterized protein LOC112003423 [Quercus suber]
 gb|POE61980.1| hypothetical protein CFP56_41811 [Quercus suber]
          Length = 453

 Score = 63.2 bits (152), Expect = 3e-07
 Identities = 61/199 (30%), Positives = 81/199 (40%), Gaps = 9/199 (4%)
 Frame = -2

Query: 1094 SKGFKVKHTXXXXXXXXXXXXXLYQVKQTYGKRSALGKTSRGM-EKLGNGHGILKLGRKG 918
            SKGFKVKH              LYQV+ ++  + A  K+S  + EK+  G+ I+KLGRK 
Sbjct: 12   SKGFKVKHAIQICLLLAICIWLLYQVRHSHETKKAYEKSSGTISEKMQGGYEIIKLGRKD 71

Query: 917  LDPQMEEIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGVGDDEIDGHXXXXXXXXXXX 738
            L PQ+EE A                             RG GDDEIDGH           
Sbjct: 72   LHPQVEETA----FETERKEELEQEIEDSKREESEDESRGGGDDEIDGH-------DQER 120

Query: 737  XXXXXXXXXXXXXXXXXXXXXXGNVEMDSFG-----ENVGLINIQHRSGVRRNTEEGKEE 573
                                  G+ E++S G     E+V     Q +    RNT+E +EE
Sbjct: 121  VEEEDSEEVEDLITEEDRETEEGDEELESEGKGNLAEDVSFSEDQAQIEGERNTQEAREE 180

Query: 572  HYRGDIDTE---HNTQLIS 525
            +Y+GD  +     NTQ IS
Sbjct: 181  NYKGDDASSAVIQNTQSIS 199


>gb|PON72584.1| hypothetical protein TorRG33x02_251610 [Trema orientalis]
          Length = 461

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 57/216 (26%), Positives = 85/216 (39%), Gaps = 10/216 (4%)
 Frame = -2

Query: 1094 SKGFKVKHTXXXXXXXXXXXXXLYQVKQTYGKRSA-LGKTSRGMEKLGNGHGILKLGRKG 918
            SKGFKVKH              LYQVK ++ K  A +  +S+ + K+  G  I+KLGR+ 
Sbjct: 12   SKGFKVKHVLQICLLLAICIWLLYQVKHSHDKNKAYVDSSSKTLAKMHTGDEIIKLGRRD 71

Query: 917  LDPQMEEIAAXXXXXXXXXXXXXXXXXXXXXXXXXXXQRGVGDDEIDGHXXXXXXXXXXX 738
            L P+++                                RG GDDEIDGH           
Sbjct: 72   LHPRVDTPFKIEKHEEREEYSKQEVEESKLAESDNEEGRGGGDDEIDGHDQERAEEEESE 131

Query: 737  XXXXXXXXXXXXXXXXXXXXXXGNVEMDSFGENVGLINIQHRSGVRRNTEEGKEEHYRGD 558
                                   + E+D   ++V  +  Q  +G + N++E +EEHY+ D
Sbjct: 132  EVEDLIDEEDREREEGIEEQEGEDKEIDF--DDVKSLEDQTENGGKSNSQEAREEHYKDD 189

Query: 557  IDTE---HNTQLIS------EKETGILAAKNEVDWE 477
              +     N Q IS      ++E    A K+EV+ E
Sbjct: 190  DASSAVMQNVQTISGILRKVKEEKFWNAGKDEVEKE 225


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