BLASTX nr result
ID: Acanthopanax23_contig00004019
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00004019
(1185 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017231214.1| PREDICTED: U1 small nuclear ribonucleoprotei... 216 3e-65
ref|XP_017237230.1| PREDICTED: U1 small nuclear ribonucleoprotei... 209 6e-63
gb|OMO77845.1| Zinc finger, U1-type [Corchorus capsularis] 206 1e-61
gb|KZN03674.1| hypothetical protein DCAR_012430 [Daucus carota s... 206 2e-61
gb|OMP06598.1| Zinc finger, U1-type [Corchorus olitorius] 206 3e-61
ref|XP_017985170.1| PREDICTED: U1 small nuclear ribonucleoprotei... 205 4e-61
ref|XP_012490474.1| PREDICTED: U1 small nuclear ribonucleoprotei... 203 3e-60
ref|XP_017627492.1| PREDICTED: U1 small nuclear ribonucleoprotei... 203 3e-60
ref|XP_022771041.1| U1 small nuclear ribonucleoprotein C [Durio ... 202 5e-60
ref|XP_017624270.1| PREDICTED: U1 small nuclear ribonucleoprotei... 202 5e-60
ref|XP_012490469.1| PREDICTED: U1 small nuclear ribonucleoprotei... 202 9e-60
ref|XP_012473506.1| PREDICTED: U1 small nuclear ribonucleoprotei... 201 1e-59
ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotei... 201 3e-59
ref|XP_016710600.1| PREDICTED: U1 small nuclear ribonucleoprotei... 200 5e-59
ref|XP_016740117.1| PREDICTED: U1 small nuclear ribonucleoprotei... 199 1e-58
gb|PPD78762.1| hypothetical protein GOBAR_DD24303 [Gossypium bar... 197 7e-58
ref|XP_021906898.1| U1 small nuclear ribonucleoprotein C isoform... 195 3e-57
gb|OVA04381.1| zinc finger protein [Macleaya cordata] 196 3e-57
ref|XP_021906897.1| U1 small nuclear ribonucleoprotein C isoform... 195 4e-57
ref|XP_022758129.1| U1 small nuclear ribonucleoprotein C-like [D... 194 6e-57
>ref|XP_017231214.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Daucus carota
subsp. sativus]
gb|KZN06181.1| hypothetical protein DCAR_007018 [Daucus carota subsp. sativus]
Length = 199
Score = 216 bits (549), Expect = 3e-65
Identities = 114/203 (56%), Positives = 129/203 (63%), Gaps = 4/203 (1%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR+YY QYE QQ+Q LID+RIKAHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVREYYQQYEQQQHQILIDERIKAHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPRPGYVXXXXX 503
A +QQVGAA+NQ Q+ + PL+PGMRPPVL RP Y+
Sbjct: 61 AAAFQQVGAAYNQMRPRMAVLPTPMMPMPGNPQMAMTGPLLPGMRPPVLMRPAYMPGPGM 120
Query: 504 XXXXXXXXXXXXL--SGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXMFTPAMYQS--SPA 671
L GQV+G PRPM MNP P+V FTP MYQ+ +P
Sbjct: 121 PPMTTTPPGAPPLPGQGQVDGAPRPMLMNPPPIV---PGSAPASSAAFTPVMYQANPNPV 177
Query: 672 APTSGGFDSSNINTQTQASEGSH 740
AP SGGFDSSN+N Q QA+E H
Sbjct: 178 AP-SGGFDSSNVNAQPQAAESGH 199
>ref|XP_017237230.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Daucus carota
subsp. sativus]
Length = 197
Score = 209 bits (533), Expect = 6e-63
Identities = 111/200 (55%), Positives = 125/200 (62%), Gaps = 1/200 (0%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQ+EAQQ+Q+L+DQRIKAHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQFEAQQSQFLVDQRIKAHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGN-QLPVNSPLIPGMRPPVLPRPGYVXXXX 500
T +QQVG +NQ GN Q P N+P +PGMRPPVL RPGY
Sbjct: 61 TPVFQQVGGVYNQMRPNFPVLPTPMMPPMQGNMQFPGNAPFVPGMRPPVLYRPGYA-PAP 119
Query: 501 XXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXMFTPAMYQSSPAAPT 680
S Q +G PM MNPLPM MF P M+QS+P P+
Sbjct: 120 GMPPMAAIPGPPSFSTQTDG-KLPMAMNPLPMFQGSIPASSGGPPMFAPGMHQSNP-PPS 177
Query: 681 SGGFDSSNINTQTQASEGSH 740
SGG DS + + QTQ E SH
Sbjct: 178 SGGLDSPDKDVQTQLPEVSH 197
>gb|OMO77845.1| Zinc finger, U1-type [Corchorus capsularis]
Length = 207
Score = 206 bits (525), Expect = 1e-61
Identities = 115/210 (54%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ---XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR-----P 479
A +QQVGAAFNQ G LPVN P++PGMRPPVLPR P
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVLPTPIMPIPGAPLPVNQPMVPGMRPPVLPRPMMGAP 120
Query: 480 GYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTPA 650
GY L GQ+NGLPRP T+ P +P M PA
Sbjct: 121 GYA-PAPGMPPMMAPPGAPPLPGQINGLPRPPTLAPPTTVPGTATTPTSSNGAPTMAAPA 179
Query: 651 MYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
YQS+PAAPTSGGFDS + Q SE +H
Sbjct: 180 PYQSTPAAPTSGGFDS--FSASAQPSEANH 207
>gb|KZN03674.1| hypothetical protein DCAR_012430 [Daucus carota subsp. sativus]
Length = 213
Score = 206 bits (524), Expect = 2e-61
Identities = 113/221 (51%), Positives = 133/221 (60%), Gaps = 1/221 (0%)
Frame = +3
Query: 81 FLGFFSIVNLVFYISFGS*AIMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYM 260
F+ F ++ VF++ + RYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYM
Sbjct: 3 FVLVFVVILFVFWL-------ICRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYM 55
Query: 261 QYEAQQNQYLIDQRIKAHLGQTAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGN-QLPVNS 437
Q+EAQQ+Q+L+DQRIKAHLGQT +QQVG +NQ GN Q P N+
Sbjct: 56 QFEAQQSQFLVDQRIKAHLGQTPVFQQVGGVYNQMRPNFPVLPTPMMPPMQGNMQFPGNA 115
Query: 438 PLIPGMRPPVLPRPGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXX 617
P +PGMRPPVL RPGY S Q +G PM MNPLPM
Sbjct: 116 PFVPGMRPPVLYRPGYA-PAPGMPPMAAIPGPPSFSTQTDG-KLPMAMNPLPMFQGSIPA 173
Query: 618 XXXXXXMFTPAMYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
MF P M+QS+P P+SGG DS + + QTQ E SH
Sbjct: 174 SSGGPPMFAPGMHQSNP-PPSSGGLDSPDKDVQTQLPEVSH 213
>gb|OMP06598.1| Zinc finger, U1-type [Corchorus olitorius]
Length = 207
Score = 206 bits (523), Expect = 3e-61
Identities = 115/210 (54%), Positives = 125/210 (59%), Gaps = 11/210 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ---XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR-----P 479
A +QQVGAAFNQ G LPVN P++PGMRPPVLPR P
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVLPTPIMPIPGAPLPVNQPMVPGMRPPVLPRPMMGAP 120
Query: 480 GYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTPA 650
GY L GQ+NGLPRP T+ P +P M PA
Sbjct: 121 GYA-PAPGMPPMMAPPGAPPLPGQINGLPRPPTLAPPTTVPGTATTPTSSNGAPTMAGPA 179
Query: 651 MYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
YQS+PAAPTSGGFDS + Q SE +H
Sbjct: 180 PYQSTPAAPTSGGFDS--FSASAQPSEANH 207
>ref|XP_017985170.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Theobroma cacao]
gb|EOY19062.1| C2H2 and C2HC zinc fingers superfamily protein isoform 1 [Theobroma
cacao]
Length = 208
Score = 205 bits (522), Expect = 4e-61
Identities = 113/211 (53%), Positives = 125/211 (59%), Gaps = 12/211 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----- 476
A +QQVGAAFNQ LP+N P++PG+RPPVLPR
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPIPGAAPLPMNQPMVPGIRPPVLPRPLPGP 120
Query: 477 PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPL---PMVXXXXXXXXXXXXMFTP 647
PGYV L GQ+NG+PRP T+ PL P M TP
Sbjct: 121 PGYV-PAPGMPPMVAPPGAPSLPGQINGVPRPPTLAPLTTVPGTATTPTSSNAAPTMVTP 179
Query: 648 AMYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
A YQ++PAAPT GGFD N N Q SE +H
Sbjct: 180 ASYQTNPAAPTGGGFD--NFNANAQPSEANH 208
>ref|XP_012490474.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X2
[Gossypium raimondii]
ref|XP_012490475.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X2
[Gossypium raimondii]
gb|KJB41943.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41945.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41946.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41947.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
Length = 205
Score = 203 bits (516), Expect = 3e-60
Identities = 108/200 (54%), Positives = 122/200 (61%), Gaps = 9/200 (4%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR--PGY 485
A + QVGAAFNQ G LP+N P++PG+RPPVLPR PGY
Sbjct: 61 AAAFHQVGAAFNQHLMAQRPRLPVLPTPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGY 120
Query: 486 VXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTPAMY 656
V GQ+NGLP+P T+ P + + M TPA+Y
Sbjct: 121 V-PVPGMPPTVAPPGAPSFPGQINGLPQPPTLAPPSTVTVTATTPTSSNAAPTMATPALY 179
Query: 657 QSSPAAPTSGGFDSSNINTQ 716
QS+PAAP SGGFD+ N N Q
Sbjct: 180 QSNPAAPASGGFDNFNANAQ 199
>ref|XP_017627492.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
arboreum]
ref|XP_017627493.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
arboreum]
ref|XP_017627494.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
arboreum]
ref|XP_017627496.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
arboreum]
ref|XP_017627497.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
arboreum]
Length = 208
Score = 203 bits (516), Expect = 3e-60
Identities = 108/203 (53%), Positives = 123/203 (60%), Gaps = 12/203 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----- 476
A + QVGAAFNQ G LP+N P++PG+RPPVLPR
Sbjct: 61 AAAFHQVGAAFNQHLMAQRPRLPILPTPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGA 120
Query: 477 PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTM---NPLPMVXXXXXXXXXXXXMFTP 647
PGYV GQ+NGLP+P T+ + +P+ M TP
Sbjct: 121 PGYV-PVPGMPPTVAPPGATSFPGQINGLPQPPTLAAPSTVPVTATTPTSSNAAPTMATP 179
Query: 648 AMYQSSPAAPTSGGFDSSNINTQ 716
A+YQS+PAAP SGGFD+ N N Q
Sbjct: 180 ALYQSNPAAPASGGFDNFNANAQ 202
>ref|XP_022771041.1| U1 small nuclear ribonucleoprotein C [Durio zibethinus]
Length = 208
Score = 202 bits (515), Expect = 5e-60
Identities = 115/211 (54%), Positives = 124/211 (58%), Gaps = 12/211 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----- 476
A +QQVGAAFNQ G LPVN P+IPGMRPPVLPR
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPIPGGAPLPVNQPMIPGMRPPVLPRPVPGA 120
Query: 477 PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTP 647
PGYV LSGQVNGLP P T+ P +P M
Sbjct: 121 PGYV-PVQGMPPMVGPPGAPSLSGQVNGLPLPPTLAPPLTVPGTATTPTSSNGAPTMAMS 179
Query: 648 AMYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
A YQ++PA PTSGGFD N N + SE +H
Sbjct: 180 APYQTNPAVPTSGGFD--NFNANARPSEANH 208
>ref|XP_017624270.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
arboreum]
gb|KHG09880.1| U1 small nuclear ribonucleoprotein C [Gossypium arboreum]
Length = 199
Score = 202 bits (514), Expect = 5e-60
Identities = 111/197 (56%), Positives = 120/197 (60%), Gaps = 6/197 (3%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR-----PGYV 488
A +QQVGAAFNQ G LPVN P++PGMRPPVLPR PGY+
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVMSIP--GAPLPVNQPMVPGMRPPVLPRPIPGAPGYI 118
Query: 489 XXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXM-FTPAMYQSS 665
L GQVNGLPRP T+ P V T A YQ++
Sbjct: 119 --PVPGMPPMMAPPGAPLPGQVNGLPRPPTLAPPTTVSGTATTPTSSNGAPTTSAPYQAN 176
Query: 666 PAAPTSGGFDSSNINTQ 716
P APTSGGFD+ N N Q
Sbjct: 177 PTAPTSGGFDNFNANAQ 193
>ref|XP_012490469.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii]
ref|XP_012490470.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii]
ref|XP_012490471.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii]
ref|XP_012490472.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii]
ref|XP_012490473.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like isoform X1
[Gossypium raimondii]
gb|KJB41939.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41940.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41941.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41942.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
gb|KJB41944.1| hypothetical protein B456_007G132200 [Gossypium raimondii]
Length = 208
Score = 202 bits (513), Expect = 9e-60
Identities = 108/203 (53%), Positives = 122/203 (60%), Gaps = 12/203 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----- 476
A + QVGAAFNQ G LP+N P++PG+RPPVLPR
Sbjct: 61 AAAFHQVGAAFNQHLMAQRPRLPVLPTPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGA 120
Query: 477 PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTP 647
PGYV GQ+NGLP+P T+ P + + M TP
Sbjct: 121 PGYV-PVPGMPPTVAPPGAPSFPGQINGLPQPPTLAPPSTVTVTATTPTSSNAAPTMATP 179
Query: 648 AMYQSSPAAPTSGGFDSSNINTQ 716
A+YQS+PAAP SGGFD+ N N Q
Sbjct: 180 ALYQSNPAAPASGGFDNFNANAQ 202
>ref|XP_012473506.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Gossypium
raimondii]
gb|KJB22546.1| hypothetical protein B456_004G053600 [Gossypium raimondii]
Length = 199
Score = 201 bits (512), Expect = 1e-59
Identities = 111/197 (56%), Positives = 120/197 (60%), Gaps = 6/197 (3%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR-----PGYV 488
A +QQVGAAFNQ G LPVN P++PGMRPPVLPR PGY+
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVMSIP--GAPLPVNQPMVPGMRPPVLPRPIPGAPGYI 118
Query: 489 XXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXMFT-PAMYQSS 665
L GQVNGLPRP T+ P V T A YQ++
Sbjct: 119 --PVPGMPPMMAPPGAPLPGQVNGLPRPPTLAPPTTVSGTVTTPTSSNGAPTISAPYQAN 176
Query: 666 PAAPTSGGFDSSNINTQ 716
P APTSGGFD+ N N Q
Sbjct: 177 PTAPTSGGFDNFNANAQ 193
>ref|XP_002270246.1| PREDICTED: U1 small nuclear ribonucleoprotein C [Vitis vinifera]
sp|F6HQ26.1|RU1C_VITVI RecName: Full=U1 small nuclear ribonucleoprotein C; Short=U1 snRNP
C; Short=U1-C; Short=U1C
Length = 213
Score = 201 bits (510), Expect = 3e-59
Identities = 111/207 (53%), Positives = 120/207 (57%), Gaps = 16/207 (7%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ---------XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR 476
TA +QQVGAA+NQ LP+NSPL+PGMRPPVLPR
Sbjct: 61 TAAFQQVGAAYNQHLVSFPGNPPRPRLPVLPTPGMPVAGSAPLPMNSPLVPGMRPPVLPR 120
Query: 477 -----PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMV--XXXXXXXXXXXX 635
PGY+ +N LPRP TMN P V
Sbjct: 121 PVPGAPGYMPAPGMPSMMAPPGAPSMPMPPLNSLPRPPTMNVPPAVPGSTSTPTSGGAPS 180
Query: 636 MFTPAMYQSSPAAPTSGGFDSSNINTQ 716
M T MYQ++PA PTSGGFDS NIN Q
Sbjct: 181 MMTQPMYQANPAGPTSGGFDSFNINAQ 207
>ref|XP_016710600.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
ref|XP_016710601.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
ref|XP_016710603.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
ref|XP_016710604.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
ref|XP_016710605.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
Length = 208
Score = 200 bits (508), Expect = 5e-59
Identities = 107/203 (52%), Positives = 122/203 (60%), Gaps = 12/203 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----- 476
A + QVGAAFNQ G LP+N P++PG+RPPVLPR
Sbjct: 61 AAAFHQVGAAFNQHLMAQRPRLPILPNPVMPIPRGAPLPINQPMVPGIRPPVLPRPVPGA 120
Query: 477 PGYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTM---NPLPMVXXXXXXXXXXXXMFTP 647
PGYV GQ+NGLP+P T+ + + + M TP
Sbjct: 121 PGYV-PVPGMPPTVAPPGATSFPGQINGLPQPPTLAAPSTVSVTATTPTSSNAAPTMATP 179
Query: 648 AMYQSSPAAPTSGGFDSSNINTQ 716
A+YQS+PAAP SGGFD+ N N Q
Sbjct: 180 ALYQSNPAAPASGGFDNFNANAQ 202
>ref|XP_016740117.1| PREDICTED: U1 small nuclear ribonucleoprotein C-like [Gossypium
hirsutum]
Length = 199
Score = 199 bits (505), Expect = 1e-58
Identities = 110/197 (55%), Positives = 119/197 (60%), Gaps = 6/197 (3%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR-----PGYV 488
A +QQVGAAFNQ G LPVN P++PGMRP VLPR PGY+
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVMSIP--GAPLPVNQPMVPGMRPRVLPRPIPGAPGYI 118
Query: 489 XXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXM-FTPAMYQSS 665
L GQVNGLPRP T+ P V T A YQ++
Sbjct: 119 --PVPGMPPMMAPPGAPLPGQVNGLPRPPTLAPPTTVSGTATTPSSSNGAPTTSAPYQAN 176
Query: 666 PAAPTSGGFDSSNINTQ 716
P APTSGGFD+ N N Q
Sbjct: 177 PTAPTSGGFDNFNANAQ 193
>gb|PPD78762.1| hypothetical protein GOBAR_DD24303 [Gossypium barbadense]
Length = 205
Score = 197 bits (500), Expect = 7e-58
Identities = 106/200 (53%), Positives = 120/200 (60%), Gaps = 9/200 (4%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR--PGY 485
A + QVGAAFNQ G L +N P++PG+RPPVLPR PGY
Sbjct: 61 AAAFHQVGAAFNQHLMAQRPRLPVLPTPVMPIPRGAPLRLNQPMVPGIRPPVLPRPVPGY 120
Query: 486 VXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTPAMY 656
GQ+NGLP+P T+ P + + M TPA+Y
Sbjct: 121 A-PVPGMPPTVAPPGAPSFPGQINGLPQPPTLVPPSTVTVTATTPTSSNAAPTMATPALY 179
Query: 657 QSSPAAPTSGGFDSSNINTQ 716
QS+PAAP SGGFD+ N N Q
Sbjct: 180 QSNPAAPASGGFDNFNANAQ 199
>ref|XP_021906898.1| U1 small nuclear ribonucleoprotein C isoform X2 [Carica papaya]
Length = 205
Score = 195 bits (496), Expect = 3e-57
Identities = 109/208 (52%), Positives = 122/208 (58%), Gaps = 9/208 (4%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLP--VNSPLIPGMRPPVLPR-----PG 482
TA +QQVGA +NQ P VN+PL+PG+RPPVLPR PG
Sbjct: 61 TAAFQQVGAVYNQHLLAQRPRLPILPTPVMPGTAPVAVNTPLVPGIRPPVLPRPVPGAPG 120
Query: 483 YVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMV--XXXXXXXXXXXXMFTPAMY 656
Y+ + GQ+N LPRP T+ P V M PA Y
Sbjct: 121 YM-PAPTMPQMVAPPGAPPMPGQLNALPRPPTIAPPATVPGSTTPASSNGAPSMVMPATY 179
Query: 657 QSSPAAPTSGGFDSSNINTQTQASEGSH 740
Q++P APTSGGFD N N TQ E +H
Sbjct: 180 QANPTAPTSGGFD--NFNASTQPPETNH 205
>gb|OVA04381.1| zinc finger protein [Macleaya cordata]
Length = 232
Score = 196 bits (498), Expect = 3e-57
Identities = 108/205 (52%), Positives = 121/205 (59%), Gaps = 7/205 (3%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHG------NQLPVNSPLIPGMRPPVLPRP-G 482
TA +QQVGAAFNQ G +Q+P +SPL+PGMRPPVLPRP
Sbjct: 61 TAAFQQVGAAFNQHLASFPPRPRLPVLPTPGMPIPGTSQMPGSSPLLPGMRPPVLPRPIA 120
Query: 483 YVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMVXXXXXXXXXXXXMFTPAMYQS 662
+ + Q+NGLPRP TM P P AMYQ+
Sbjct: 121 GIPGYGAPPMSMAPPGAPSMPMQMNGLPRPPTMTP-PTTVPGGMTPTSNGTPNPGAMYQA 179
Query: 663 SPAAPTSGGFDSSNINTQTQASEGS 737
+PAAP SG FD+ NIN + S
Sbjct: 180 NPAAPASGVFDAYNINNAASGLQRS 204
>ref|XP_021906897.1| U1 small nuclear ribonucleoprotein C isoform X1 [Carica papaya]
Length = 206
Score = 195 bits (495), Expect = 4e-57
Identities = 108/208 (51%), Positives = 120/208 (57%), Gaps = 9/208 (4%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQXXXXXXXXXXXXXXXXHGNQLP--VNSPLIPGMRPPVLPR-----PG 482
TA +QQVGA +NQ P VN+PL+PG+RPPVLPR PG
Sbjct: 61 TAAFQQVGAVYNQHLLAQRPRLPILPTPVMPGTAPVAVNTPLVPGIRPPVLPRPVPGAPG 120
Query: 483 YVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNPLPMV--XXXXXXXXXXXXMFTPAMY 656
+ GQ+N LPRP T+ P V M PA Y
Sbjct: 121 GYMPAPTMPQMVAPPGAPPMPGQLNALPRPPTIAPPATVPGSTTPASSNGAPSMVMPATY 180
Query: 657 QSSPAAPTSGGFDSSNINTQTQASEGSH 740
Q++P APTSGGFD N N TQ E +H
Sbjct: 181 QANPTAPTSGGFD--NFNASTQPPETNH 206
>ref|XP_022758129.1| U1 small nuclear ribonucleoprotein C-like [Durio zibethinus]
Length = 207
Score = 194 bits (494), Expect = 6e-57
Identities = 110/210 (52%), Positives = 122/210 (58%), Gaps = 11/210 (5%)
Frame = +3
Query: 144 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRDYYMQYEAQQNQYLIDQRIKAHLGQ 323
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YY Q+E QQ Q LIDQRIK HLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 324 TAPYQQVGAAFNQ----XXXXXXXXXXXXXXXXHGNQLPVNSPLIPGMRPPVLPR----P 479
A +QQVGAAFNQ G +PVN P++PG+RPPVLPR P
Sbjct: 61 AAAFQQVGAAFNQHLMAQRPRLPVLPTPVMPIPGGAPMPVNQPMVPGIRPPVLPRPPGAP 120
Query: 480 GYVXXXXXXXXXXXXXXXXXLSGQVNGLPRPMTMNP---LPMVXXXXXXXXXXXXMFTPA 650
GYV L GQ+N LPRP T+ P +P M TPA
Sbjct: 121 GYV-NVPGMPPMLAPPGAPSLPGQINRLPRPPTLAPPTTVPGSTTTPTSSNGAPTMATPA 179
Query: 651 MYQSSPAAPTSGGFDSSNINTQTQASEGSH 740
Y ++ A TSGGFD N N Q SE +H
Sbjct: 180 PYPTNIAVSTSGGFD--NFNANAQPSEANH 207