BLASTX nr result

ID: Acanthopanax23_contig00003182 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00003182
         (582 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM95098.1| hypothetical protein DCAR_018340 [Daucus carota s...   113   4e-27
ref|XP_017252797.1| PREDICTED: serine/arginine-rich-splicing fac...   113   9e-27
gb|KZN03639.1| hypothetical protein DCAR_012395 [Daucus carota s...   110   6e-26
ref|XP_017241915.1| PREDICTED: serine/arginine-rich-splicing fac...   110   1e-25
gb|KVI03994.1| Nucleotide-binding, alpha-beta plait [Cynara card...   102   4e-24
ref|XP_023772843.1| serine/arginine-rich-splicing factor SR34-li...   102   3e-23
gb|PLY78513.1| hypothetical protein LSAT_5X191120 [Lactuca sativa]    102   3e-23
gb|KVF41933.1| Nucleotide-binding, alpha-beta plait [Cynara card...   102   4e-23
ref|XP_023772842.1| serine/arginine-rich-splicing factor SR34-li...   102   5e-23
gb|KVI12508.1| Nucleotide-binding, alpha-beta plait [Cynara card...   102   1e-22
gb|PLY63055.1| hypothetical protein LSAT_8X53720 [Lactuca sativa]     100   2e-22
ref|XP_021999070.1| serine/arginine-rich-splicing factor SR34-li...   100   2e-22
gb|OTG06252.1| putative nucleotide-binding alpha-beta plait doma...   100   2e-22
ref|XP_021999068.1| serine/arginine-rich-splicing factor SR34-li...   100   3e-22
ref|XP_023747883.1| serine/arginine-rich-splicing factor SR34 is...   100   5e-22
ref|XP_023747882.1| serine/arginine-rich-splicing factor SR34 is...   100   5e-22
ref|XP_023747880.1| serine/arginine-rich-splicing factor SR34 is...   100   6e-22
ref|XP_023747879.1| serine/arginine-rich-splicing factor SR34 is...   100   6e-22
ref|XP_022037977.1| LOW QUALITY PROTEIN: serine/arginine-rich-sp...    96   4e-21
emb|CDP17134.1| unnamed protein product [Coffea canephora]             97   5e-21

>gb|KZM95098.1| hypothetical protein DCAR_018340 [Daucus carota subsp. sativus]
          Length = 294

 Score =  113 bits (283), Expect = 4e-27
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRSPGAKG 410
           QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEF+NAFSRGVIRVKVYDSSRSPG +G
Sbjct: 151 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFKNAFSRGVIRVKVYDSSRSPGHRG 207


>ref|XP_017252797.1| PREDICTED: serine/arginine-rich-splicing factor SR34-like [Daucus
           carota subsp. sativus]
          Length = 334

 Score =  113 bits (283), Expect = 9e-27
 Identities = 54/57 (94%), Positives = 56/57 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRSPGAKG 410
           QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEF+NAFSRGVIRVKVYDSSRSPG +G
Sbjct: 151 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFKNAFSRGVIRVKVYDSSRSPGHRG 207


>gb|KZN03639.1| hypothetical protein DCAR_012395 [Daucus carota subsp. sativus]
          Length = 995

 Score =  110 bits (274), Expect(3) = 6e-26
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRSPG 419
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEF+NAFSRGVIRVKVYDSSRSPG
Sbjct: 752 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKNAFSRGVIRVKVYDSSRSPG 805



 Score = 33.5 bits (75), Expect(3) = 6e-26
 Identities = 21/40 (52%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
 Frame = -1

Query: 348 NLLNPNLHVAQDLVRGPCLPAL--ALAQNHDLSQDNGYMR 235
           NL N NLH  QDLV+   L AL  AL ++  L QD GY+R
Sbjct: 828 NLQNLNLHAVQDLVQDLYLLALGRALDRSRVLCQDIGYLR 867



 Score = 21.9 bits (45), Expect(3) = 6e-26
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 229 WGLPIRILMGYGSNAYNLLVVEIGSKKIMDKA 134
           WGL ++  M  GSNA    +   G +  +D++
Sbjct: 870 WGLHVKFSMRLGSNA----IFGCGDRSYLDQS 897


>ref|XP_017241915.1| PREDICTED: serine/arginine-rich-splicing factor SR34 [Daucus carota
           subsp. sativus]
          Length = 298

 Score =  110 bits (274), Expect = 1e-25
 Identities = 52/54 (96%), Positives = 54/54 (100%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRSPG 419
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEF+NAFSRGVIRVKVYDSSRSPG
Sbjct: 146 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFKNAFSRGVIRVKVYDSSRSPG 199


>gb|KVI03994.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 171

 Score =  102 bits (255), Expect = 4e-24
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSSRS
Sbjct: 11  QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSRS 62


>ref|XP_023772843.1| serine/arginine-rich-splicing factor SR34-like isoform X2 [Lactuca
           sativa]
          Length = 271

 Score =  102 bits (255), Expect = 3e-23
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSSRS
Sbjct: 141 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSRS 192


>gb|PLY78513.1| hypothetical protein LSAT_5X191120 [Lactuca sativa]
          Length = 271

 Score =  102 bits (255), Expect = 3e-23
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSSRS
Sbjct: 141 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSRS 192


>gb|KVF41933.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 285

 Score =  102 bits (255), Expect = 4e-23
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSSRS
Sbjct: 141 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSRS 192


>ref|XP_023772842.1| serine/arginine-rich-splicing factor SR34-like isoform X1 [Lactuca
           sativa]
          Length = 291

 Score =  102 bits (255), Expect = 5e-23
 Identities = 49/52 (94%), Positives = 51/52 (98%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSSRS
Sbjct: 141 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSRS 192


>gb|KVI12508.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 297

 Score =  102 bits (253), Expect = 1e-22
 Identities = 49/52 (94%), Positives = 50/52 (96%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRGVIRVK YDSS S
Sbjct: 146 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGVIRVKEYDSSHS 197


>gb|PLY63055.1| hypothetical protein LSAT_8X53720 [Lactuca sativa]
          Length = 230

 Score =  100 bits (248), Expect = 2e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSS S
Sbjct: 148 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYDSSHS 199


>ref|XP_021999070.1| serine/arginine-rich-splicing factor SR34-like isoform X2
           [Helianthus annuus]
          Length = 272

 Score =  100 bits (250), Expect = 2e-22
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSSRS
Sbjct: 146 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGFIRVKEYDSSRS 197


>gb|OTG06252.1| putative nucleotide-binding alpha-beta plait domain-containing
           protein [Helianthus annuus]
          Length = 285

 Score =  100 bits (250), Expect = 2e-22
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSSRS
Sbjct: 139 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGFIRVKEYDSSRS 190


>ref|XP_021999068.1| serine/arginine-rich-splicing factor SR34-like isoform X1
           [Helianthus annuus]
 ref|XP_021999069.1| serine/arginine-rich-splicing factor SR34-like isoform X1
           [Helianthus annuus]
          Length = 292

 Score =  100 bits (250), Expect = 3e-22
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+EGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSSRS
Sbjct: 146 QVFKEGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGFIRVKEYDSSRS 197


>ref|XP_023747883.1| serine/arginine-rich-splicing factor SR34 isoform X4 [Lactuca
           sativa]
          Length = 284

 Score =  100 bits (248), Expect = 5e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSS S
Sbjct: 148 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYDSSHS 199


>ref|XP_023747882.1| serine/arginine-rich-splicing factor SR34 isoform X3 [Lactuca
           sativa]
          Length = 286

 Score =  100 bits (248), Expect = 5e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSS S
Sbjct: 150 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYDSSHS 201


>ref|XP_023747880.1| serine/arginine-rich-splicing factor SR34 isoform X2 [Lactuca
           sativa]
 ref|XP_023747881.1| serine/arginine-rich-splicing factor SR34 isoform X2 [Lactuca
           sativa]
          Length = 296

 Score =  100 bits (248), Expect = 6e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSS S
Sbjct: 148 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYDSSHS 199


>ref|XP_023747879.1| serine/arginine-rich-splicing factor SR34 isoform X1 [Lactuca
           sativa]
          Length = 298

 Score =  100 bits (248), Expect = 6e-22
 Identities = 48/52 (92%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREGGGTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVK YDSS S
Sbjct: 150 QVFREGGGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYDSSHS 201


>ref|XP_022037977.1| LOW QUALITY PROTEIN: serine/arginine-rich-splicing factor SR34-like
           [Helianthus annuus]
          Length = 226

 Score = 96.3 bits (238), Expect = 4e-21
 Identities = 46/52 (88%), Positives = 49/52 (94%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVF+ GGGTTGIVDYTNYD+MKYAIRKLD+SEFRNAFSRG IRVK YDSSRS
Sbjct: 158 QVFKVGGGTTGIVDYTNYDNMKYAIRKLDDSEFRNAFSRGFIRVKEYDSSRS 209


>emb|CDP17134.1| unnamed protein product [Coffea canephora]
          Length = 253

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 46/52 (88%), Positives = 48/52 (92%)
 Frame = -3

Query: 580 QVFREGGGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKVYDSSRS 425
           QVFREG GTTGIVDYTNYDDMKY+IRKLDESEFRN+FSR  IRVK YDSSRS
Sbjct: 131 QVFREGSGTTGIVDYTNYDDMKYSIRKLDESEFRNSFSRATIRVKEYDSSRS 182


Top