BLASTX nr result
ID: Acanthopanax23_contig00002697
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax23_contig00002697
(596 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017238503.1| PREDICTED: small nuclear ribonucleoprotein S... 70 8e-12
ref|XP_011088069.1| small nuclear ribonucleoprotein SmD3b-like [... 69 2e-11
ref|XP_011078877.1| small nuclear ribonucleoprotein SmD3b-like [... 69 2e-11
ref|XP_012834349.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_012857249.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_016452778.1| PREDICTED: small nuclear ribonucleoprotein S... 67 2e-11
ref|XP_021997673.1| small nuclear ribonucleoprotein SmD3b-like [... 69 2e-11
ref|XP_016474022.1| PREDICTED: small nuclear ribonucleoprotein S... 67 2e-11
ref|XP_016558775.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_015064006.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_006366566.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_004233553.1| PREDICTED: small nuclear ribonucleoprotein S... 69 2e-11
ref|XP_016474021.1| PREDICTED: small nuclear ribonucleoprotein S... 67 2e-11
gb|OAY65354.1| Small nuclear ribonucleoprotein SmD3b, partial [A... 67 3e-11
ref|XP_022847596.1| small nuclear ribonucleoprotein SmD3b-like [... 68 4e-11
gb|PIN16684.1| Small nuclear ribonucleoprotein Sm D3 [Handroanth... 68 4e-11
gb|PIA56814.1| hypothetical protein AQUCO_00700873v1 [Aquilegia ... 68 4e-11
gb|OVA00601.1| Ribonucleoprotein LSM domain [Macleaya cordata] 68 4e-11
dbj|GAV63476.1| LSM domain-containing protein [Cephalotus follic... 68 4e-11
gb|KZV54210.1| hypothetical protein F511_36778 [Dorcoceras hygro... 68 4e-11
>ref|XP_017238503.1| PREDICTED: small nuclear ribonucleoprotein SmD3b [Daucus carota
subsp. sativus]
gb|KZN00779.1| hypothetical protein DCAR_009533 [Daucus carota subsp. sativus]
Length = 132
Score = 69.7 bits (169), Expect = 8e-12
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 99
>ref|XP_011088069.1| small nuclear ribonucleoprotein SmD3b-like [Sesamum indicum]
Length = 132
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_011078877.1| small nuclear ribonucleoprotein SmD3b-like [Sesamum indicum]
gb|PIN19987.1| Small nuclear ribonucleoprotein Sm D3 [Handroanthus impetiginosus]
Length = 132
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_012834349.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Erythranthe
guttata]
gb|EYU39880.1| hypothetical protein MIMGU_mgv1a016145mg [Erythranthe guttata]
Length = 133
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_012857249.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Erythranthe
guttata]
gb|EYU20728.1| hypothetical protein MIMGU_mgv1a016114mg [Erythranthe guttata]
Length = 133
Score = 68.9 bits (167), Expect = 2e-11
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_016452778.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like [Nicotiana
tabacum]
Length = 81
Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKG+S+
Sbjct: 15 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSL 48
>ref|XP_021997673.1| small nuclear ribonucleoprotein SmD3b-like [Helianthus annuus]
Length = 127
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_016474022.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like isoform X2
[Nicotiana tabacum]
Length = 90
Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKG+S+
Sbjct: 24 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSL 57
>ref|XP_016558775.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like [Capsicum
annuum]
gb|PHT55045.1| Small nuclear ribonucleoprotein Sm D3 [Capsicum baccatum]
gb|PHT89073.1| Small nuclear ribonucleoprotein Sm D3 [Capsicum annuum]
gb|PHU25002.1| Small nuclear ribonucleoprotein Sm D3 [Capsicum chinense]
Length = 132
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_015064006.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like [Solanum
pennellii]
Length = 132
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_006366566.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like [Solanum
tuberosum]
Length = 132
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_004233553.1| PREDICTED: small nuclear ribonucleoprotein SmD3b [Solanum
lycopersicum]
Length = 132
Score = 68.6 bits (166), Expect = 2e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKGSS+
Sbjct: 66 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGSSL 99
>ref|XP_016474021.1| PREDICTED: small nuclear ribonucleoprotein SmD3b-like isoform X1
[Nicotiana tabacum]
Length = 94
Score = 67.4 bits (163), Expect = 2e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRLEARIKGKG+S+
Sbjct: 28 RGSKVRFMIIPDMLKNAPMFKRLEARIKGKGTSL 61
>gb|OAY65354.1| Small nuclear ribonucleoprotein SmD3b, partial [Ananas comosus]
Length = 93
Score = 67.0 bits (162), Expect = 3e-11
Identities = 31/34 (91%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFM+IPDMLKNAPMFKRL+ARIKGKGS+I
Sbjct: 28 RGSKVRFMIIPDMLKNAPMFKRLDARIKGKGSAI 61
>ref|XP_022847596.1| small nuclear ribonucleoprotein SmD3b-like [Olea europaea var.
sylvestris]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGS++
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 99
>gb|PIN16684.1| Small nuclear ribonucleoprotein Sm D3 [Handroanthus impetiginosus]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGS++
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 99
>gb|PIA56814.1| hypothetical protein AQUCO_00700873v1 [Aquilegia coerulea]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRL+ARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 99
>gb|OVA00601.1| Ribonucleoprotein LSM domain [Macleaya cordata]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRL+ARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 99
>dbj|GAV63476.1| LSM domain-containing protein [Cephalotus follicularis]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRL+ARIKGKGSS+
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLDARIKGKGSSL 99
>gb|KZV54210.1| hypothetical protein F511_36778 [Dorcoceras hygrometricum]
Length = 132
Score = 67.8 bits (164), Expect = 4e-11
Identities = 32/34 (94%), Positives = 34/34 (100%)
Frame = +2
Query: 2 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSI 103
RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGS++
Sbjct: 66 RGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSAL 99