BLASTX nr result

ID: Acanthopanax23_contig00001402 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00001402
         (563 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017247607.1| PREDICTED: fasciclin-like arabinogalactan pr...    72   8e-12
gb|PHU00518.1| hypothetical protein BC332_30305 [Capsicum chinense]    58   1e-06
gb|PHT31782.1| hypothetical protein CQW23_28119 [Capsicum baccatum]    58   1e-06
ref|XP_016552083.1| PREDICTED: fasciclin-like arabinogalactan pr...    58   1e-06
gb|PHT65553.1| hypothetical protein T459_29978 [Capsicum annuum]       58   1e-06
ref|XP_011100933.1| fasciclin-like arabinogalactan protein 19 [S...    55   8e-06

>ref|XP_017247607.1| PREDICTED: fasciclin-like arabinogalactan protein 21 [Daucus carota
           subsp. sativus]
 gb|KZN08753.1| hypothetical protein DCAR_001409 [Daucus carota subsp. sativus]
          Length = 290

 Score = 72.4 bits (176), Expect = 8e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%)
 Frame = +3

Query: 45  LRNLSPHYSLLLNTAPLNVTVFVDGVRISCPNLFIGPGIAVHGLDGILVPDELGLDSPPG 224
           L  L  HYS+L+N   +N TV VDGV I+ P+LF+GP I VHGLDGILVP ELGLD P  
Sbjct: 110 LDTLLTHYSVLVNQNAVNDTV-VDGVAIALPDLFVGPRIVVHGLDGILVPGELGLDDPVR 168

Query: 225 D 227
           D
Sbjct: 169 D 169


>gb|PHU00518.1| hypothetical protein BC332_30305 [Capsicum chinense]
          Length = 299

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 9/61 (14%)
 Frame = +3

Query: 36  LADLRNLS--------PHYSLLL-NTAPLNVTVFVDGVRISCPNLFIGPGIAVHGLDGIL 188
           L+ LRNL+        PHYS+L+ N+   +V V VDGVR+S PNLFIG   AVHGLDGIL
Sbjct: 154 LSQLRNLTAPYLSTLLPHYSILVENSNTDDVFVTVDGVRVSDPNLFIGSRFAVHGLDGIL 213

Query: 189 V 191
           +
Sbjct: 214 L 214


>gb|PHT31782.1| hypothetical protein CQW23_28119 [Capsicum baccatum]
          Length = 299

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 9/61 (14%)
 Frame = +3

Query: 36  LADLRNLS--------PHYSLLL-NTAPLNVTVFVDGVRISCPNLFIGPGIAVHGLDGIL 188
           L+ LRNL+        PHYS+L+ N+   +V V VDGVR+S PNLFIG   AVHGLDGIL
Sbjct: 154 LSQLRNLTAPYLSTLLPHYSILVENSNTDDVFVTVDGVRVSDPNLFIGSRFAVHGLDGIL 213

Query: 189 V 191
           +
Sbjct: 214 L 214


>ref|XP_016552083.1| PREDICTED: fasciclin-like arabinogalactan protein 19 [Capsicum
           annuum]
          Length = 299

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 9/61 (14%)
 Frame = +3

Query: 36  LADLRNLS--------PHYSLLL-NTAPLNVTVFVDGVRISCPNLFIGPGIAVHGLDGIL 188
           L+ LRNL+        PHYS+L+ N+   +V V VDGVR+S PNLFIG   AVHGLDGIL
Sbjct: 154 LSQLRNLTAPYLSTLLPHYSILVENSNTDDVFVTVDGVRVSDPNLFIGSRFAVHGLDGIL 213

Query: 189 V 191
           +
Sbjct: 214 L 214


>gb|PHT65553.1| hypothetical protein T459_29978 [Capsicum annuum]
          Length = 305

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/61 (55%), Positives = 42/61 (68%), Gaps = 9/61 (14%)
 Frame = +3

Query: 36  LADLRNLS--------PHYSLLL-NTAPLNVTVFVDGVRISCPNLFIGPGIAVHGLDGIL 188
           L+ LRNL+        PHYS+L+ N+   +V V VDGVR+S PNLFIG   AVHGLDGIL
Sbjct: 160 LSQLRNLTAPYLSTLLPHYSILVENSNTDDVFVTVDGVRVSDPNLFIGSRFAVHGLDGIL 219

Query: 189 V 191
           +
Sbjct: 220 L 220


>ref|XP_011100933.1| fasciclin-like arabinogalactan protein 19 [Sesamum indicum]
          Length = 259

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 35/79 (44%), Positives = 45/79 (56%), Gaps = 16/79 (20%)
 Frame = +3

Query: 3   PTSKHSSTTCPLADLRNLS--------PHYSLLLN--------TAPLNVTVFVDGVRISC 134
           P  +H+ T     DL+NLS        PHYS+L+         +    V V VDGV +S 
Sbjct: 107 PDHRHTFT-----DLQNLSSPFLDTLLPHYSVLIGKIQDSDALSGNATVGVMVDGVSLSD 161

Query: 135 PNLFIGPGIAVHGLDGILV 191
           P+LF+GP IAVHG+DGILV
Sbjct: 162 PDLFLGPRIAVHGIDGILV 180


Top