BLASTX nr result

ID: Acanthopanax23_contig00000968 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00000968
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017244741.1| PREDICTED: classical arabinogalactan protein...    57   3e-07
ref|XP_023762319.1| classical arabinogalactan protein 4-like [La...    54   2e-06

>ref|XP_017244741.1| PREDICTED: classical arabinogalactan protein 10-like [Daucus carota
           subsp. sativus]
 gb|KZM98442.1| hypothetical protein DCAR_014196 [Daucus carota subsp. sativus]
          Length = 135

 Score = 57.0 bits (136), Expect = 3e-07
 Identities = 25/30 (83%), Positives = 29/30 (96%)
 Frame = -2

Query: 326 PSGSFADGWVNRAVIAGTAITGTCLAIALM 237
           PSGSFADGWV+RAVIAGTA+T TCL++ALM
Sbjct: 106 PSGSFADGWVHRAVIAGTAVTATCLSMALM 135


>ref|XP_023762319.1| classical arabinogalactan protein 4-like [Lactuca sativa]
          Length = 126

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 24/31 (77%), Positives = 28/31 (90%)
 Frame = -2

Query: 329 VPSGSFADGWVNRAVIAGTAITGTCLAIALM 237
           +PSGSFADGWVNRAVIAGTA+ G+ LA+ LM
Sbjct: 96  LPSGSFADGWVNRAVIAGTAVAGSFLAVTLM 126


Top