BLASTX nr result

ID: Acanthopanax23_contig00000609 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax23_contig00000609
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094245.1| 33 kDa ribonucleoprotein, chloroplastic [Ses...    55   1e-05

>ref|XP_011094245.1| 33 kDa ribonucleoprotein, chloroplastic [Sesamum indicum]
          Length = 320

 Score = 54.7 bits (130), Expect = 1e-05
 Identities = 25/43 (58%), Positives = 34/43 (79%)
 Frame = -1

Query: 479 EVEGRPIRLNLAEKRAPPTRPPRVERNF*DDIDTNKILSSIST 351
           EVEGRP+RLNLAE+RAP + PP VE     D++ +++LSS+ST
Sbjct: 278 EVEGRPLRLNLAEQRAPASPPPAVENTSETDVENSEMLSSVST 320


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