BLASTX nr result
ID: Acanthopanax22_contig00000086
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax22_contig00000086
(716 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ALI91149.1| RpoC1, partial (chloroplast) [Pyrenacantha malvif... 403 e-138
gb|ALI91119.1| RpoC1, partial (chloroplast) [Hosiea japonica] 403 e-137
gb|AHE41640.1| RNA polymerase beta' subunit protein, partial (ch... 401 e-136
gb|AII17898.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17895.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17892.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17885.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17881.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17880.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast... 402 e-136
gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (ch... 400 e-136
sp|Q68S15.2|RPOC1_PANGI RecName: Full=DNA-directed RNA polymeras... 406 e-136
ref|YP_086957.1| RNA polymerase beta' subunit [Panax ginseng] >g... 406 e-136
ref|YP_009191931.1| RNA polymerase beta' subunit (chloroplast) [... 406 e-136
ref|YP_009191844.1| RNA polymerase beta' subunit (chloroplast) [... 406 e-136
ref|YP_009161670.1| RNA polymerase beta (chloroplast) [Fatsia ja... 406 e-136
ref|YP_009122716.1| RNA polymerase beta' subunit (chloroplast) [... 406 e-136
ref|YP_009121164.1| RNA polymerase beta (chloroplast) [Panax not... 406 e-136
>gb|ALI91149.1| RpoC1, partial (chloroplast) [Pyrenacantha malvifolia]
Length = 435
Score = 403 bits (1036), Expect = e-138
Identities = 206/236 (87%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGA+REQLADLDLRII+D+SLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 173 QGFDTFRNREISTGAGAVREQLADLDLRIIVDNSLVEWKELGEDGPTGNEWEDRKVGRRK 232
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 233 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 292
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 293 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 352
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQ
Sbjct: 353 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQ 408
>gb|ALI91119.1| RpoC1, partial (chloroplast) [Hosiea japonica]
Length = 488
Score = 403 bits (1036), Expect = e-137
Identities = 206/236 (87%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGA+REQLADLDLRII+D+SLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 33 QGFDTFRNREISTGAGAVREQLADLDLRIIVDNSLVEWKELGEDGPTGNEWEDRKVGRRK 92
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 93 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 152
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 153 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 212
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTF+IRGLIRQ
Sbjct: 213 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFLIRGLIRQ 268
>gb|AHE41640.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Cercidiphyllum japonicum]
Length = 486
Score = 401 bits (1031), Expect = e-136
Identities = 206/236 (87%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRK+GRRK
Sbjct: 12 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKIGRRK 71
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 72 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 131
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 132 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 191
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRET+LGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 192 GKEGRFRETMLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 247
>gb|AII17898.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
vernicosum]
Length = 532
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 35 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 94
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 95 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 154
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 155 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 214
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 215 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 270
>gb|AII17896.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum tinus]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17895.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
taiwanianum]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17892.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
plicatum]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17885.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
erubescens]
gb|AII17886.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
grandiflorum]
gb|AII17889.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
lutescens]
gb|AII17894.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
sieboldii]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17883.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
dentatum]
gb|AII17890.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum molle]
gb|AII17897.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
triphyllum]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17881.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
clemensae]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17880.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
cassinoides]
gb|AII17888.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
lentago]
gb|AII17893.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
punctatum]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AII17877.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
acerifolium]
gb|AII17882.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
cylindricum]
gb|AII17884.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
dilatatum]
gb|AII17887.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
lantanoides]
gb|AII17891.1| RNA polymerase beta subunit, partial (chloroplast) [Viburnum
opulus]
Length = 540
Score = 402 bits (1034), Expect = e-136
Identities = 208/236 (88%), Positives = 209/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GPTGNEWEDRKVGRRK
Sbjct: 41 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPTGNEWEDRKVGRRK 100
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 101 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 160
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 161 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 220
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 221 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 276
>gb|AHE41646.1| RNA polymerase beta' subunit protein, partial (chloroplast)
[Mytilaria laosensis]
Length = 487
Score = 400 bits (1028), Expect = e-136
Identities = 206/236 (87%), Positives = 208/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIID SLVEWKELGE+GP GNEWEDRK+GRRK
Sbjct: 12 QGFDTFRNREISTGAGAIREQLADLDLRIIIDYSLVEWKELGEEGPAGNEWEDRKIGRRK 71
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 72 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 131
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 132 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 191
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 192 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 247
>sp|Q68S15.2|RPOC1_PANGI RecName: Full=DNA-directed RNA polymerase subunit beta'; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta'; Short=RNA polymerase subunit beta'
gb|AIX98475.1| RpoC1 (chloroplast) [Panax ginseng]
Length = 682
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 182 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 241
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 242 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 301
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 302 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 361
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 362 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 417
>ref|YP_086957.1| RNA polymerase beta' subunit [Panax ginseng]
ref|YP_009155419.1| RpoC1 (chloroplast) [Panax quinquefolius]
gb|AAT98500.1| RNA polymerase beta I subunit (chloroplast) [Panax ginseng]
gb|AGM15016.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGM15102.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGM15188.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AGW31948.1| RNA polymerase beta' subunit (chloroplast) [Panax ginseng]
gb|AIX97880.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX97967.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98050.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98135.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98220.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98305.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98390.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AIX98560.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AJC99479.1| RpoC1 (chloroplast) [Panax quinquefolius]
gb|AJC99564.1| RpoC1 (chloroplast) [Panax ginseng]
gb|AJC99649.1| RpoC1 (chloroplast) [Panax ginseng]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424
>ref|YP_009191931.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|AKB99237.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|AKB99324.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
gb|ATJ26118.1| RNA polymerase beta' subunit (chloroplast) [Panax sp. VM-2017]
gb|ATJ26285.1| RNA polymerase beta' subunit (chloroplast) [Panax vietnamensis]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424
>ref|YP_009191844.1| RNA polymerase beta' subunit (chloroplast) [Panax japonicus]
gb|AKB99150.1| RNA polymerase beta' subunit (chloroplast) [Panax japonicus]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424
>ref|YP_009161670.1| RNA polymerase beta (chloroplast) [Fatsia japonica]
gb|AKS10944.1| RNA polymerase beta (chloroplast) [Fatsia japonica]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424
>ref|YP_009122716.1| RNA polymerase beta' subunit (chloroplast) [Dendropanax dentiger]
ref|YP_009159529.1| RpoC1 (chloroplast) [Dendropanax morbifer]
gb|AJK29847.1| RNA polymerase beta' subunit (chloroplast) [Dendropanax dentiger]
gb|AKQ20719.1| RpoC1 (chloroplast) [Dendropanax morbifer]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424
>ref|YP_009121164.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
gb|AIA24318.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
gb|AKB99063.1| RNA polymerase beta' subunit (chloroplast) [Panax notoginseng]
gb|AKG26591.1| RNA polymerase beta' subunit (chloroplast) [Panax notoginseng]
gb|AKU70766.1| RNA polymerase beta (chloroplast) [Panax notoginseng]
Length = 689
Score = 406 bits (1044), Expect = e-136
Identities = 210/236 (88%), Positives = 210/236 (88%)
Frame = -1
Query: 710 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 531
QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK
Sbjct: 189 QGFDTFRNREISTGAGAIREQLADLDLRIIIDSSLVEWKELGEDGPTGNEWEDRKVGRRK 248
Query: 530 DFLVRRMELAKHFIRTNIEPEWMVXXXXXXXXXXXXPIIQIDGGKLMSSDINELYRRVIY 351
DFLVRRMELAKHFIRTNIEPEWMV PIIQIDGGKLMSSDINELYRRVIY
Sbjct: 249 DFLVRRMELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIY 308
Query: 350 XXXXXXXXXXXXXXTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 171
TPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE
Sbjct: 309 RNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIE 368
Query: 170 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 3
GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ
Sbjct: 369 GKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQ 424