BLASTX nr result

ID: Acanthopanax21_contig00029501 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00029501
         (592 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POE60554.1| f-box/kelch-repeat protein [Quercus suber]              57   1e-06
ref|XP_023892645.1| F-box/kelch-repeat protein At3g23880-like [Q...    57   3e-06
ref|XP_016545831.1| PREDICTED: F-box protein At3g07870-like [Cap...    57   3e-06
gb|OMP04715.1| hypothetical protein COLO4_09372 [Corchorus olito...    57   6e-06

>gb|POE60554.1| f-box/kelch-repeat protein [Quercus suber]
          Length = 203

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 37/88 (42%), Positives = 48/88 (54%)
 Frame = -1

Query: 592 EVFREINLPDECINTTFMNPYGMTLFVMVFKGSLSLFVNDTEGLSPEGDFMYNIWVLKDY 413
           EVFR I+LPD      F    G  +   VFKG LSL   D E +        ++WV+K+Y
Sbjct: 57  EVFRVISLPD---GKKFQA--GADIGTSVFKGLLSLICYDYESMKIR---CCSVWVMKEY 108

Query: 412 GFVESWTKQFTIFIPMPIGGVYGFTRSG 329
           G V+SWTKQFTI +      V GF ++G
Sbjct: 109 GAVDSWTKQFTIDLNSRFFRVLGFWKNG 136


>ref|XP_023892645.1| F-box/kelch-repeat protein At3g23880-like [Quercus suber]
          Length = 386

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 37/88 (42%), Positives = 48/88 (54%)
 Frame = -1

Query: 592 EVFREINLPDECINTTFMNPYGMTLFVMVFKGSLSLFVNDTEGLSPEGDFMYNIWVLKDY 413
           EVFR I+LPD      F    G  +   VFKG LSL   D E +        ++WV+K+Y
Sbjct: 240 EVFRVISLPD---GKKFQA--GADIGTSVFKGLLSLICYDYESMKIR---CCSVWVMKEY 291

Query: 412 GFVESWTKQFTIFIPMPIGGVYGFTRSG 329
           G V+SWTKQFTI +      V GF ++G
Sbjct: 292 GAVDSWTKQFTIDLNSRFFRVLGFWKNG 319


>ref|XP_016545831.1| PREDICTED: F-box protein At3g07870-like [Capsicum annuum]
          Length = 392

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 36/89 (40%), Positives = 50/89 (56%)
 Frame = -1

Query: 592 EVFREINLPDECINTTFMNPYGMTLFVMVFKGSLSLFVNDTEGLSPEGDFMYNIWVLKDY 413
           EVFREI LPDE +         M L VMV +GSL++ V    GL+  G     +WV+K Y
Sbjct: 249 EVFREIELPDELVGVI-----PMYLGVMVLEGSLAV-VKYERGLNGSGSC--EVWVMKSY 300

Query: 412 GFVESWTKQFTIFIPMPIGGVYGFTRSGK 326
           G VESW++ + I +   +  V GF  +G+
Sbjct: 301 GVVESWSRLYRINLVAGMEKVVGFRNNGE 329


>gb|OMP04715.1| hypothetical protein COLO4_09372 [Corchorus olitorius]
          Length = 541

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 29/75 (38%), Positives = 45/75 (60%)
 Frame = -1

Query: 592 EVFREINLPDECINTTFMNPYGMTLFVMVFKGSLSLFVNDTEGLSPEGDFMYNIWVLKDY 413
           EVF+EI LP+ C    F+  Y   L +  ++ SL+L   D +  S   + +Y IWV+K+Y
Sbjct: 403 EVFQEIMLPNHC---NFIREYRSILSITEYRNSLTLVTYDYDYES--NNIVYQIWVMKEY 457

Query: 412 GFVESWTKQFTIFIP 368
           G  +SW +QF+I +P
Sbjct: 458 GAADSWVQQFSIELP 472


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