BLASTX nr result

ID: Acanthopanax21_contig00029262 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00029262
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017248130.1| PREDICTED: putative uncharacterized protein ...    57   4e-06
gb|KZM98407.1| hypothetical protein DCAR_014231 [Daucus carota s...    57   5e-06

>ref|XP_017248130.1| PREDICTED: putative uncharacterized protein DDB_G0291608 [Daucus
           carota subsp. sativus]
          Length = 361

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
 Frame = -3

Query: 389 SRADSSFLTTSGNHPIFNPLSMSQPSHNP---------FDPLANYFDPPFSSRXXXXXXX 237
           S AD  + + +G     NP S +  ++NP         FDPL+NYFDPP  SR       
Sbjct: 13  SGADDDYESRAGESTFSNPSSTTTTTNNPLLFSQSSTMFDPLSNYFDPPIPSRPTHQNQN 72

Query: 236 XXXLD--MGCSKPQSNSTHQVNPFFAPPTQPVSFPRQGTENIAAPRQPPRGGVVSASSMA 63
                  +    P S    Q NPFF P T   SFP     +I+ P      G  +   + 
Sbjct: 73  QNQNTSLLNLDMP-SWPKSQPNPFFTPQTPMSSFP-----HISEPIPTTTPGNNTNQVIQ 126

Query: 62  NTPAVQAQTNEARNPKKRSR 3
                Q QT   RNPKKRSR
Sbjct: 127 QDQTSQTQT---RNPKKRSR 143


>gb|KZM98407.1| hypothetical protein DCAR_014231 [Daucus carota subsp. sativus]
          Length = 563

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
 Frame = -3

Query: 389 SRADSSFLTTSGNHPIFNPLSMSQPSHNP---------FDPLANYFDPPFSSRXXXXXXX 237
           S AD  + + +G     NP S +  ++NP         FDPL+NYFDPP  SR       
Sbjct: 13  SGADDDYESRAGESTFSNPSSTTTTTNNPLLFSQSSTMFDPLSNYFDPPIPSRPTHQNQN 72

Query: 236 XXXLD--MGCSKPQSNSTHQVNPFFAPPTQPVSFPRQGTENIAAPRQPPRGGVVSASSMA 63
                  +    P S    Q NPFF P T   SFP     +I+ P      G  +   + 
Sbjct: 73  QNQNTSLLNLDMP-SWPKSQPNPFFTPQTPMSSFP-----HISEPIPTTTPGNNTNQVIQ 126

Query: 62  NTPAVQAQTNEARNPKKRSR 3
                Q QT   RNPKKRSR
Sbjct: 127 QDQTSQTQT---RNPKKRSR 143



 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 47/140 (33%), Positives = 59/140 (42%), Gaps = 11/140 (7%)
 Frame = -3

Query: 389 SRADSSFLTTSGNHPIFNPLSMSQPSHNP---------FDPLANYFDPPFSSRXXXXXXX 237
           S AD  + + +G     NP S +  ++NP         FDPL+NYFDPP  SR       
Sbjct: 215 SGADDDYESRAGESTFSNPSSTTTTTNNPLLFSQSSTMFDPLSNYFDPPIPSRPTHQNQN 274

Query: 236 XXXLD--MGCSKPQSNSTHQVNPFFAPPTQPVSFPRQGTENIAAPRQPPRGGVVSASSMA 63
                  +    P S    Q NPFF P T   SFP     +I+ P      G  +   + 
Sbjct: 275 QNQNTSLLNLDMP-SWPKSQPNPFFTPQTPMSSFP-----HISEPIPTTTPGNNTNQVIQ 328

Query: 62  NTPAVQAQTNEARNPKKRSR 3
                Q QT   RNPKKRSR
Sbjct: 329 QDQTSQTQT---RNPKKRSR 345


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