BLASTX nr result
ID: Acanthopanax21_contig00028678
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00028678
(625 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_017241772.1| PREDICTED: pentatricopeptide repeat-containi... 103 8e-22
ref|XP_009598735.1| PREDICTED: pentatricopeptide repeat-containi... 96 1e-20
gb|PHT98865.1| Pentatricopeptide repeat-containing protein [Caps... 99 2e-20
gb|PHT51245.1| Pentatricopeptide repeat-containing protein [Caps... 99 2e-20
gb|KGN49793.1| hypothetical protein Csa_5G129290 [Cucumis sativus] 92 2e-20
ref|XP_016568498.1| PREDICTED: pentatricopeptide repeat-containi... 98 6e-20
ref|XP_016568497.1| PREDICTED: pentatricopeptide repeat-containi... 98 6e-20
ref|XP_016472065.1| PREDICTED: pentatricopeptide repeat-containi... 96 2e-19
ref|XP_009603001.1| PREDICTED: pentatricopeptide repeat-containi... 96 2e-19
ref|XP_009761051.1| PREDICTED: pentatricopeptide repeat-containi... 95 5e-19
ref|XP_014502595.1| pentatricopeptide repeat-containing protein ... 95 5e-19
ref|XP_015073891.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-18
ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-18
ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containi... 94 1e-18
ref|XP_015902571.1| PREDICTED: pentatricopeptide repeat-containi... 92 2e-18
ref|XP_017429218.1| PREDICTED: pentatricopeptide repeat-containi... 93 2e-18
ref|XP_015872729.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-18
ref|XP_015871475.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-18
ref|XP_015871421.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 92 4e-18
ref|XP_015870454.1| PREDICTED: pentatricopeptide repeat-containi... 92 4e-18
>ref|XP_017241772.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Daucus carota subsp. sativus]
gb|KZN01203.1| hypothetical protein DCAR_009957 [Daucus carota subsp. sativus]
Length = 882
Score = 103 bits (256), Expect = 8e-22
Identities = 44/59 (74%), Positives = 47/59 (79%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VGS T Q IR+LKSLRMCE CH T KY+SKAY REIY+ DS CLHH KDG CSCGDYW
Sbjct: 824 VGSAHTCQPIRILKSLRMCEDCHATIKYVSKAYEREIYICDSNCLHHFKDGSCSCGDYW 882
>ref|XP_009598735.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Nicotiana tomentosiformis]
ref|XP_009598736.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Nicotiana tomentosiformis]
Length = 251
Score = 96.3 bits (238), Expect = 1e-20
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ + Q+S+ IR++K+LRMCE CHRT K+IS+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 193 IKNPQSSRVIRIVKNLRMCEDCHRTAKFISQKYEREIYIHDSKCLHHFKDGYCSCGNYW 251
>gb|PHT98865.1| Pentatricopeptide repeat-containing protein [Capsicum chinense]
Length = 899
Score = 99.4 bits (246), Expect = 2e-20
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ Q+SQ IR++K+LRMCE CHRT K++S+ Y REIYV DSKCLHH KDG+CSCGDYW
Sbjct: 841 INHPQSSQVIRIVKNLRMCEDCHRTAKFVSQKYEREIYVHDSKCLHHFKDGNCSCGDYW 899
>gb|PHT51245.1| Pentatricopeptide repeat-containing protein [Capsicum baccatum]
Length = 899
Score = 99.4 bits (246), Expect = 2e-20
Identities = 40/59 (67%), Positives = 49/59 (83%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ Q+SQ IR++K+LRMCE CHRT K++S+ Y REIYV DSKCLHH KDG+CSCGDYW
Sbjct: 841 INHPQSSQVIRIVKNLRMCEDCHRTAKFVSQKYEREIYVHDSKCLHHFKDGNCSCGDYW 899
>gb|KGN49793.1| hypothetical protein Csa_5G129290 [Cucumis sativus]
Length = 134
Score = 92.4 bits (228), Expect = 2e-20
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+GS+ T ++I+++K+LRMC CH+ KYIS AY EIY+ DSKCLHH K+GHCSCGDYW
Sbjct: 76 IGSSHTRKSIKIVKNLRMCVDCHQMAKYISAAYECEIYLSDSKCLHHFKNGHCSCGDYW 134
>ref|XP_016568498.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
isoform X2 [Capsicum annuum]
Length = 767
Score = 97.8 bits (242), Expect = 6e-20
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ Q+SQ IR++K+LRMCE CHRT K++S+ Y REIYV DSKCLHH K+G+CSCGDYW
Sbjct: 709 INHPQSSQVIRIVKNLRMCEDCHRTAKFVSQKYEREIYVHDSKCLHHFKEGNCSCGDYW 767
>ref|XP_016568497.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
isoform X1 [Capsicum annuum]
gb|PHT84864.1| Pentatricopeptide repeat-containing protein [Capsicum annuum]
Length = 899
Score = 97.8 bits (242), Expect = 6e-20
Identities = 39/59 (66%), Positives = 49/59 (83%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ Q+SQ IR++K+LRMCE CHRT K++S+ Y REIYV DSKCLHH K+G+CSCGDYW
Sbjct: 841 INHPQSSQVIRIVKNLRMCEDCHRTAKFVSQKYEREIYVHDSKCLHHFKEGNCSCGDYW 899
>ref|XP_016472065.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Nicotiana tabacum]
ref|XP_016472066.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Nicotiana tabacum]
Length = 879
Score = 96.3 bits (238), Expect = 2e-19
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ + Q+S+ IR++K+LRMCE CHRT K+IS+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 821 IKNPQSSRVIRIVKNLRMCEDCHRTAKFISQKYEREIYIHDSKCLHHFKDGYCSCGNYW 879
>ref|XP_009603001.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Nicotiana tomentosiformis]
ref|XP_018626895.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Nicotiana tomentosiformis]
Length = 879
Score = 96.3 bits (238), Expect = 2e-19
Identities = 38/59 (64%), Positives = 50/59 (84%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ + Q+S+ IR++K+LRMCE CHRT K+IS+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 821 IKNPQSSRVIRIVKNLRMCEDCHRTAKFISQKYEREIYIHDSKCLHHFKDGYCSCGNYW 879
>ref|XP_009761051.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Nicotiana sylvestris]
ref|XP_016468116.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Nicotiana tabacum]
Length = 879
Score = 95.1 bits (235), Expect = 5e-19
Identities = 38/59 (64%), Positives = 49/59 (83%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ + Q+S+ IR++K+LRMCE CHRT K IS+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 821 INNPQSSRVIRIVKNLRMCEDCHRTAKCISQEYEREIYIHDSKCLHHFKDGYCSCGNYW 879
>ref|XP_014502595.1| pentatricopeptide repeat-containing protein At1g19720 [Vigna radiata
var. radiata]
Length = 893
Score = 95.1 bits (235), Expect = 5e-19
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+GS T Q +R++K+LRMC+ CH T KYIS AYG EIY+ DS CLHH KDGHCSC DYW
Sbjct: 835 IGSHHTPQILRIVKNLRMCKDCHDTAKYISLAYGCEIYLSDSNCLHHFKDGHCSCNDYW 893
>ref|XP_015073891.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Solanum pennellii]
Length = 884
Score = 94.0 bits (232), Expect = 1e-18
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ S Q+S+ IR++K+LRMCE CHR K +S+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 826 INSPQSSRVIRIVKNLRMCEDCHRIAKLVSQKYEREIYIHDSKCLHHFKDGYCSCGNYW 884
>ref|XP_006341986.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Solanum tuberosum]
Length = 884
Score = 94.0 bits (232), Expect = 1e-18
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ S Q+S+ IR++K+LRMCE CHR K +S+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 826 INSPQSSRVIRIVKNLRMCEDCHRIAKLVSQKYEREIYIHDSKCLHHFKDGYCSCGNYW 884
>ref|XP_004238610.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Solanum lycopersicum]
Length = 884
Score = 94.0 bits (232), Expect = 1e-18
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+ S Q+S+ IR++K+LRMCE CHR K +S+ Y REIY+ DSKCLHH KDG+CSCG+YW
Sbjct: 826 INSPQSSRVIRIVKNLRMCEDCHRIAKLVSQKYEREIYIHDSKCLHHFKDGYCSCGNYW 884
>ref|XP_015902571.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Ziziphus jujuba]
Length = 393
Score = 92.4 bits (228), Expect = 2e-18
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VG + +TIR++K+LRMC CH+T KYIS AYG EIY++DSKCLH+ +GHCSCGDYW
Sbjct: 335 VGFSSKPRTIRMVKNLRMCGDCHKTAKYISVAYGCEIYLKDSKCLHYFSNGHCSCGDYW 393
>ref|XP_017429218.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720
[Vigna angularis]
dbj|BAT81530.1| hypothetical protein VIGAN_03127100 [Vigna angularis var. angularis]
Length = 893
Score = 93.2 bits (230), Expect = 2e-18
Identities = 38/59 (64%), Positives = 45/59 (76%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
+GS Q +R++K+LRMC+ CH T KYIS AYG EIY+ DS CLHH KDGHCSC DYW
Sbjct: 835 IGSHHAPQILRIVKNLRMCKDCHDTAKYISLAYGCEIYLSDSNCLHHFKDGHCSCNDYW 893
>ref|XP_015872729.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Ziziphus jujuba]
Length = 578
Score = 92.4 bits (228), Expect = 4e-18
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VG + +TIR++K+LRMC CH+T KYIS AYG EIY++DSKCLH+ +GHCSCGDYW
Sbjct: 520 VGFSSKPRTIRMVKNLRMCGDCHKTAKYISVAYGCEIYLKDSKCLHYFSNGHCSCGDYW 578
>ref|XP_015871475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Ziziphus jujuba]
Length = 883
Score = 92.4 bits (228), Expect = 4e-18
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VG + +TIR++K+LRMC CH+T KYIS AYG EIY++DSKCLH+ +GHCSCGDYW
Sbjct: 825 VGFSSKPRTIRMVKNLRMCGDCHKTAKYISVAYGCEIYLKDSKCLHYFSNGHCSCGDYW 883
>ref|XP_015871421.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g19720-like [Ziziphus jujuba]
Length = 883
Score = 92.4 bits (228), Expect = 4e-18
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VG + +TIR++K+LRMC CH+T KYIS AYG EIY++DSKCLH+ +GHCSCGDYW
Sbjct: 825 VGFSSKPRTIRMVKNLRMCGDCHKTAKYISVAYGCEIYLKDSKCLHYFSNGHCSCGDYW 883
>ref|XP_015870454.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
[Ziziphus jujuba]
Length = 889
Score = 92.4 bits (228), Expect = 4e-18
Identities = 38/59 (64%), Positives = 48/59 (81%)
Frame = +1
Query: 1 VGSTQTSQTIRVLKSLRMCEGCHRTFKYISKAYGREIYVRDSKCLHHIKDGHCSCGDYW 177
VG + +TIR++K+LRMC CH+T KYIS AYG EIY++DSKCLH+ +GHCSCGDYW
Sbjct: 831 VGFSSKPRTIRMVKNLRMCGDCHKTAKYISVAYGCEIYLKDSKCLHYFSNGHCSCGDYW 889