BLASTX nr result

ID: Acanthopanax21_contig00028384 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00028384
         (639 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015077293.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
ref|XP_004241171.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
ref|XP_019223765.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
ref|XP_009799989.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
ref|XP_009592351.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
gb|PHU16160.1| 60S acidic ribosomal protein P0-1 [Capsicum chine...    59   1e-06
gb|PHT46894.1| 60S acidic ribosomal protein P0-1 [Capsicum bacca...    59   1e-06
ref|XP_016577700.1| PREDICTED: 60S acidic ribosomal protein P0-l...    59   1e-06
ref|XP_006350830.1| PREDICTED: 60S acidic ribosomal protein P0-l...    57   3e-06
gb|KZM95716.1| hypothetical protein DCAR_018958 [Daucus carota s...    55   4e-06

>ref|XP_015077293.1| PREDICTED: 60S acidic ribosomal protein P0-like [Solanum pennellii]
          Length = 318

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS 25
           GK+TMM  SI+ HA +T    N  FL+
Sbjct: 57  GKNTMMKRSIRIHAEKT---GNNAFLA 80


>ref|XP_004241171.1| PREDICTED: 60S acidic ribosomal protein P0-like [Solanum
           lycopersicum]
          Length = 318

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS 25
           GK+TMM  SI+ HA +T    N  FL+
Sbjct: 57  GKNTMMKRSIRIHAEKT---GNNAFLA 80


>ref|XP_019223765.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nicotiana
           attenuata]
 gb|OIT33837.1| 60s acidic ribosomal protein p0 [Nicotiana attenuata]
          Length = 319

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS 25
           GK+TMM  SI+ HA +T    N  FL+
Sbjct: 57  GKNTMMKRSIRIHAEKT---GNNAFLA 80


>ref|XP_009799989.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nicotiana
           sylvestris]
 ref|XP_016456868.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nicotiana tabacum]
          Length = 319

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS 25
           GK+TMM  SI+ HA +T    N  FL+
Sbjct: 57  GKNTMMKRSIRIHAEKT---GNNAFLA 80


>ref|XP_009592351.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nicotiana
           tomentosiformis]
 ref|XP_016466882.1| PREDICTED: 60S acidic ribosomal protein P0-like [Nicotiana tabacum]
          Length = 319

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKGEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS*CL 16
           GK+TMM  SI+ HA +T G  + + L  CL
Sbjct: 57  GKNTMMKRSIRIHAEKT-GNNSFLALIPCL 85


>gb|PHU16160.1| 60S acidic ribosomal protein P0-1 [Capsicum chinense]
          Length = 318

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEI----------PTILM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++            +LM
Sbjct: 1   MAVKITKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSVVLM 56

Query: 105 GKSTMMMCSIQRHALRT 55
           GK+TMM  SI+ HA +T
Sbjct: 57  GKNTMMKRSIRIHAEKT 73


>gb|PHT46894.1| 60S acidic ribosomal protein P0-1 [Capsicum baccatum]
          Length = 318

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEI----------PTILM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++            +LM
Sbjct: 1   MAVKITKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSVVLM 56

Query: 105 GKSTMMMCSIQRHALRT 55
           GK+TMM  SI+ HA +T
Sbjct: 57  GKNTMMKRSIRIHAEKT 73


>ref|XP_016577700.1| PREDICTED: 60S acidic ribosomal protein P0-like [Capsicum annuum]
 gb|PHT80269.1| 60S acidic ribosomal protein P0 [Capsicum annuum]
          Length = 318

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 10/77 (12%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEI----------PTILM 106
           MA   ++ E+KV Y KKLCKLLDTY QILI+G     + VG  ++            +LM
Sbjct: 1   MAVKITKAEKKVNYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSVVLM 56

Query: 105 GKSTMMMCSIQRHALRT 55
           GK+TMM  SI+ HA +T
Sbjct: 57  GKNTMMKRSIRIHAEKT 73


>ref|XP_006350830.1| PREDICTED: 60S acidic ribosomal protein P0-like [Solanum tuberosum]
          Length = 318

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 10/87 (11%)
 Frame = -1

Query: 255 MARDSSRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEIPTI----------LM 106
           MA   ++ E+K  Y KKLCKLLDTY QILI+G     + VG  ++  I          LM
Sbjct: 1   MAVKVTKAEKKASYDKKLCKLLDTYQQILIVGA----DNVGSNQLQMIRKGLRGDSIVLM 56

Query: 105 GKSTMMMCSIQRHALRTVGRTNEVFLS 25
           GK+TMM  SI+ HA +T    N  FL+
Sbjct: 57  GKNTMMKRSIRIHAEKT---GNNAFLA 80


>gb|KZM95716.1| hypothetical protein DCAR_018958 [Daucus carota subsp. sativus]
          Length = 143

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 10/72 (13%)
 Frame = -1

Query: 240 SRKERKVKYHKKLCKLLDTYNQILIIGGF*A*EEVGCAEI----------PTILMGKSTM 91
           +R E+K+ Y +KLCKLLD YNQILI+G     + VG  ++            ILMGK+TM
Sbjct: 7   ARTEKKIAYDEKLCKLLDIYNQILIVGV----DNVGSNQLQGIRAGLRGDSIILMGKNTM 62

Query: 90  MMCSIQRHALRT 55
           M  SI+ HA +T
Sbjct: 63  MKRSIRVHAEKT 74


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