BLASTX nr result

ID: Acanthopanax21_contig00028370 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00028370
         (594 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEF24270.1| conserved hypothetical protein [Ricinus communis]       62   2e-08
gb|OMO59865.1| hypothetical protein COLO4_34030 [Corchorus olito...    55   3e-07
gb|EEF30422.1| conserved hypothetical protein [Ricinus communis]       55   6e-06

>gb|EEF24270.1| conserved hypothetical protein [Ricinus communis]
          Length = 224

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 28/35 (80%), Positives = 29/35 (82%)
 Frame = +1

Query: 325 MRSKRVPGHHHSTPFLVYFGYNFIYGAIRPSARLD 429
           MRSKRVPGHHHSTPFLVYFGYNFIY   R  + LD
Sbjct: 1   MRSKRVPGHHHSTPFLVYFGYNFIYDQGRKPSPLD 35


>gb|OMO59865.1| hypothetical protein COLO4_34030 [Corchorus olitorius]
          Length = 53

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +1

Query: 313 LLQTMRSKRVPGHHHSTPFLVYFG 384
           LLQTMRSKRVPGHHHSTPFLVYFG
Sbjct: 10  LLQTMRSKRVPGHHHSTPFLVYFG 33


>gb|EEF30422.1| conserved hypothetical protein [Ricinus communis]
          Length = 178

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/24 (95%), Positives = 23/24 (95%)
 Frame = -3

Query: 364 EWNDDDRALSWISWFGASGAFLSL 293
           EWNDDDRALSWISWFGASG FLSL
Sbjct: 21  EWNDDDRALSWISWFGASGVFLSL 44


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