BLASTX nr result
ID: Acanthopanax21_contig00027718
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Acanthopanax21_contig00027718
(481 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PNX98734.1| retrovirus-related Pol polyprotein from transposo... 51 6e-13
gb|OTF97427.1| putative phenylacetic acid degradation-related do... 50 2e-12
ref|XP_019082593.1| PREDICTED: uncharacterized protein LOC109125... 50 5e-12
gb|PNY14327.1| retrovirus-related Pol polyprotein from transposo... 49 9e-12
ref|XP_020540159.1| uncharacterized protein LOC110010867 [Jatrop... 50 2e-11
ref|XP_018487874.1| PREDICTED: uncharacterized protein LOC108858... 50 4e-11
ref|XP_019089068.1| PREDICTED: uncharacterized protein LOC109127... 51 4e-11
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana] 51 7e-11
dbj|GAU19969.1| hypothetical protein TSUD_273040 [Trifolium subt... 49 2e-10
gb|AAC02664.1| polyprotein [Arabidopsis thaliana] 47 3e-10
gb|PNX93589.1| putative gag-pol polyprotein [Trifolium pratense] 50 3e-10
dbj|GAU43335.1| hypothetical protein TSUD_398800 [Trifolium subt... 48 3e-10
gb|PNX92637.1| hypothetical protein L195_g015777, partial [Trifo... 48 5e-10
sp|Q94HW2.1|POLR1_ARATH RecName: Full=Retrovirus-related Pol pol... 50 6e-10
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 50 6e-10
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 50 6e-10
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] >gi|338746551... 50 6e-10
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 50 6e-10
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 50 6e-10
gb|OMO68753.1| Integrase, catalytic core [Corchorus capsularis] 46 7e-10
>gb|PNX98734.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 581
Score = 51.2 bits (121), Expect(2) = 6e-13
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIALDYHF
Sbjct: 498 TYLCANPVFHSRMKHIALDYHF 519
Score = 50.1 bits (118), Expect(2) = 6e-13
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL---PDHQHLSH 299
L V HIS K+QL DILTKPL+R FT K+GV+D +L HQH H
Sbjct: 529 LKVSHISTKEQLADILTKPLSRIKFTHIRDKMGVMDGNPILRGRDKHQHDKH 580
>gb|OTF97427.1| putative phenylacetic acid degradation-related domain, HotDog
domain protein [Helianthus annuus]
Length = 304
Score = 49.7 bits (117), Expect(2) = 2e-12
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPV+HSRM H+ALDYHF
Sbjct: 164 TYLCANPVYHSRMKHVALDYHF 185
Score = 49.7 bits (117), Expect(2) = 2e-12
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L V HI+ DQL D+LTKPL+R PF SKIGV D +S+L
Sbjct: 195 LKVHHINTTDQLADVLTKPLSRAPFLSLRSKIGVSDGSSIL 235
>ref|XP_019082593.1| PREDICTED: uncharacterized protein LOC109125429 [Camelina sativa]
Length = 392
Score = 49.7 bits (117), Expect(2) = 5e-12
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L V H++ KDQL D LTKPL+R PFT F KIGV S S+L
Sbjct: 349 LRVVHVTTKDQLADALTKPLSRIPFTTFLRKIGVTSSPSIL 389
Score = 48.5 bits (114), Expect(2) = 5e-12
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLC NPVFHSRM HIA+DYHF
Sbjct: 318 TYLCTNPVFHSRMKHIAVDYHF 339
>gb|PNY14327.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1151
Score = 49.3 bits (116), Expect(2) = 9e-12
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HI LDYHF
Sbjct: 1072 TYLCANPVFHSRMKHIELDYHF 1093
Score = 48.1 bits (113), Expect(2) = 9e-12
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVLPDH 284
L V HIS K+QL DILTKPL+R FT K+GV+D +L H
Sbjct: 1103 LQVSHISTKEQLADILTKPLSRTRFTYIRDKMGVMDGNPILRGH 1146
>ref|XP_020540159.1| uncharacterized protein LOC110010867 [Jatropha curcas]
Length = 284
Score = 50.1 bits (118), Expect(2) = 2e-11
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L V HIS K Q+ D+LTK L +HPF F S+IGV D TS+L
Sbjct: 231 LQVLHISSKSQIADMLTKALCKHPFLHFRSRIGVSDGTSIL 271
Score = 46.2 bits (108), Expect(2) = 2e-11
Identities = 16/22 (72%), Positives = 20/22 (90%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TY CANP++H+RM H+ALDYHF
Sbjct: 200 TYFCANPIYHTRMKHLALDYHF 221
>ref|XP_018487874.1| PREDICTED: uncharacterized protein LOC108858452 [Raphanus sativus]
Length = 450
Score = 49.7 bits (117), Expect(2) = 4e-11
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM H ALDYHF
Sbjct: 380 TYLCANPVFHSRMKHFALDYHF 401
Score = 45.4 bits (106), Expect(2) = 4e-11
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S K+QL D LTKPLTR PF Q SKIGV
Sbjct: 411 LRVVHVSSKNQLADALTKPLTRAPFQQLSSKIGV 444
>ref|XP_019089068.1| PREDICTED: uncharacterized protein LOC109127923 [Camelina sativa]
Length = 334
Score = 51.2 bits (121), Expect(2) = 4e-11
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIALDYHF
Sbjct: 249 TYLCANPVFHSRMKHIALDYHF 270
Score = 43.9 bits (102), Expect(2) = 4e-11
Identities = 22/39 (56%), Positives = 27/39 (69%)
Frame = +3
Query: 159 VRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
V H++ KDQL D LTKPL+R FT +KIGV S S+L
Sbjct: 282 VVHVNTKDQLADALTKPLSRPTFTLLTNKIGVTPSPSIL 320
>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
Length = 1429
Score = 50.8 bits (120), Expect(2) = 7e-11
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM H+ALDYHF
Sbjct: 1359 TYLCANPVFHSRMKHVALDYHF 1380
Score = 43.5 bits (101), Expect(2) = 7e-11
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S KDQL D LTKPL R FT+ SKIGV
Sbjct: 1390 LRVSHVSTKDQLADALTKPLPRPRFTELNSKIGV 1423
>dbj|GAU19969.1| hypothetical protein TSUD_273040 [Trifolium subterraneum]
Length = 1314
Score = 48.9 bits (115), Expect(2) = 2e-10
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLC+NPVFHSRM HIALDYH+
Sbjct: 1237 TYLCSNPVFHSRMKHIALDYHY 1258
Score = 43.9 bits (102), Expect(2) = 2e-10
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +3
Query: 144 LSFLLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L L V HIS KDQ DILTKPL+R FT KIG+ D +L
Sbjct: 1265 LGQLRVSHISTKDQPADILTKPLSRPRFTYLRDKIGLTDCDPIL 1308
>gb|AAC02664.1| polyprotein [Arabidopsis thaliana]
Length = 1451
Score = 46.6 bits (109), Expect(2) = 3e-10
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S KDQL D LTKPL R PFT SKIGV
Sbjct: 1412 LRVTHVSTKDQLADALTKPLPRQPFTTLISKIGV 1445
Score = 45.8 bits (107), Expect(2) = 3e-10
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYL ANPVFHSRM HIALD+HF
Sbjct: 1381 TYLSANPVFHSRMKHIALDFHF 1402
>gb|PNX93589.1| putative gag-pol polyprotein [Trifolium pratense]
Length = 980
Score = 50.1 bits (118), Expect(2) = 3e-10
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM H+A+DYHF
Sbjct: 904 TYLCANPVFHSRMKHVAIDYHF 925
Score = 42.4 bits (98), Expect(2) = 3e-10
Identities = 24/46 (52%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPL--TRHPFTQF*SKIGVIDSTSVLPDH 284
L V H+ QL D+LTKPL TRH F + KIGVI++TS+L H
Sbjct: 935 LQVSHVPTSHQLADLLTKPLSTTRHHFLK--DKIGVIENTSILRGH 978
>dbj|GAU43335.1| hypothetical protein TSUD_398800 [Trifolium subterraneum]
Length = 922
Score = 48.1 bits (113), Expect(2) = 3e-10
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1
Query: 91 YLCANPVFHSRMNHIALDYHF 153
YLC+NPVFHSRM HIALDYHF
Sbjct: 847 YLCSNPVFHSRMKHIALDYHF 867
Score = 43.9 bits (102), Expect(2) = 3e-10
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVLPDH 284
L+V HIS KDQL DILTK L F+ KIGVID +L H
Sbjct: 877 LIVSHISTKDQLADILTKALHCTRFSLLRDKIGVIDGDPILRGH 920
>gb|PNX92637.1| hypothetical protein L195_g015777, partial [Trifolium pratense]
Length = 165
Score = 47.8 bits (112), Expect(2) = 5e-10
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TY+C+NPVFHSRM HIALDYH+
Sbjct: 88 TYVCSNPVFHSRMKHIALDYHY 109
Score = 43.9 bits (102), Expect(2) = 5e-10
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +3
Query: 144 LSFLLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L L V HIS KDQ DILTKPL+R FT KIG+ D +L
Sbjct: 116 LGKLRVSHISTKDQPADILTKPLSRPRFTYLRDKIGLTDCDPIL 159
>sp|Q94HW2.1|POLR1_ARATH RecName: Full=Retrovirus-related Pol polyprotein from transposon RE1;
AltName: Full=Retro element 1; Short=AtRE1; Includes:
RecName: Full=Protease RE1; Includes: RecName:
Full=Reverse transcriptase RE1; Includes: RecName:
Full=Endonuclease RE1
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
dbj|BAB84015.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1396 TYLCANPVFHSRMKHIAIDYHF 1417
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1427 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1396 TYLCANPVFHSRMKHIAIDYHF 1417
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1427 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
dbj|BAK41510.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1396 TYLCANPVFHSRMKHIAIDYHF 1417
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1427 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1460
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana]
dbj|BAK41505.1| polyprotein [Arabidopsis thaliana]
dbj|BAK41506.1| polyprotein [Arabidopsis thaliana]
dbj|BAK41508.1| polyprotein [Arabidopsis thaliana]
dbj|BAK41509.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1377 TYLCANPVFHSRMKHIAIDYHF 1398
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1408 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1441
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1377 TYLCANPVFHSRMKHIAIDYHF 1398
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1408 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1441
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 50.4 bits (119), Expect(2) = 6e-10
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TYLCANPVFHSRM HIA+DYHF
Sbjct: 1361 TYLCANPVFHSRMKHIAIDYHF 1382
Score = 40.8 bits (94), Expect(2) = 6e-10
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGV 254
L V H+S DQL D LTKPL+R F F SKIGV
Sbjct: 1392 LRVVHVSTHDQLADTLTKPLSRTAFQNFASKIGV 1425
>gb|OMO68753.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1059
Score = 45.8 bits (107), Expect(2) = 7e-10
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = +3
Query: 153 LLVRHISRKDQLTDILTKPLTRHPFTQF*SKIGVIDSTSVL 275
L V+HIS K QL D LTKPL+ F Q SKIGV+D +++L
Sbjct: 1002 LQVKHISTKAQLADALTKPLSSDRFHQLISKIGVLDQSTIL 1042
Score = 45.1 bits (105), Expect(2) = 7e-10
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1
Query: 88 TYLCANPVFHSRMNHIALDYHF 153
TY CANPVFHSRM H+ALDY F
Sbjct: 971 TYTCANPVFHSRMKHLALDYFF 992