BLASTX nr result

ID: Acanthopanax21_contig00027634 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00027634
         (486 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017214739.1| PREDICTED: polyribonucleotide nucleotidyltra...    63   2e-08
ref|XP_017214738.1| PREDICTED: polyribonucleotide nucleotidyltra...    63   2e-08

>ref|XP_017214739.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2,
           mitochondrial isoform X2 [Daucus carota subsp. sativus]
          Length = 883

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   VAVGSVASTVEQPKVRAPVNDVRNQQEKQMSVEEDSQVEKNKXXXXXXXXXXXPTILIRS 180
           + V  V+ST+E PK+  PVNDV N+Q+KQ S  ED  ++KN+             ILIRS
Sbjct: 663 MTVDFVSSTMETPKIWPPVNDVANEQDKQESAMEDMSLDKNE--SSDVTSSSSSEILIRS 720

Query: 181 AEDCD-VEKSAVLNVNXXXXXXXXXXXXXXXXXXXFLSQNKELDSAVSDSGLFS 339
           A +CD VEKSAVL  N                      Q  + DS +S   LFS
Sbjct: 721 AAECDEVEKSAVLVKNSNSRPKTSSNKRSDKKSKVVAPQKNDRDSPISAFDLFS 774


>ref|XP_017214738.1| PREDICTED: polyribonucleotide nucleotidyltransferase 2, mitochondrial
            isoform X1 [Daucus carota subsp. sativus]
 gb|KZM90925.1| hypothetical protein DCAR_021710 [Daucus carota subsp. sativus]
          Length = 980

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 44/114 (38%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1    VAVGSVASTVEQPKVRAPVNDVRNQQEKQMSVEEDSQVEKNKXXXXXXXXXXXPTILIRS 180
            + V  V+ST+E PK+  PVNDV N+Q+KQ S  ED  ++KN+             ILIRS
Sbjct: 760  MTVDFVSSTMETPKIWPPVNDVANEQDKQESAMEDMSLDKNE--SSDVTSSSSSEILIRS 817

Query: 181  AEDCD-VEKSAVLNVNXXXXXXXXXXXXXXXXXXXFLSQNKELDSAVSDSGLFS 339
            A +CD VEKSAVL  N                      Q  + DS +S   LFS
Sbjct: 818  AAECDEVEKSAVLVKNSNSRPKTSSNKRSDKKSKVVAPQKNDRDSPISAFDLFS 871


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