BLASTX nr result

ID: Acanthopanax21_contig00027293 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00027293
         (595 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZM87636.1| hypothetical protein DCAR_031924 [Daucus carota s...    74   4e-12
gb|KZM94204.1| hypothetical protein DCAR_017447 [Daucus carota s...    74   8e-12

>gb|KZM87636.1| hypothetical protein DCAR_031924 [Daucus carota subsp. sativus]
          Length = 338

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = -1

Query: 589 LKGSTSGGLPHPSLITTLCHQAGVRWGVGDPLQTPTTLLDHNLIQRYQVWPGGESHPKGL 410
           L+G T+G +P+ +++T LC  +GVRW   + LQ P   +DH+ I R   W GG  HP+GL
Sbjct: 173 LQGGTTGAIPYGTIVTKLCRSSGVRWPANEQLQLPAAPIDHSAISRMTEWDGGVPHPRGL 232

Query: 409 GFTF---PDTQPQDATMDDAPGSSSAGTSRGFGRYFQRMEQQMVRIAKRQEVVH 257
           G+ +   P  +P      +   +S AGTS+         +    R+A+R + +H
Sbjct: 233 GYIYDEMPGGRP-GFIRRERTRASGAGTSQTERSSEPMGDVHYRRLARRMDTMH 285


>gb|KZM94204.1| hypothetical protein DCAR_017447 [Daucus carota subsp. sativus]
          Length = 402

 Score = 73.6 bits (179), Expect = 8e-12
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = -1

Query: 589 LKGSTSGGLPHPSLITTLCHQAGVRWGVGDPLQTPTTLLDHNLIQRYQVWPGGESHPKGL 410
           L+G T+G +P+ +++T LC  +GVRW   + LQ P   +DH+ I R   W GG  HP+GL
Sbjct: 237 LQGGTTGAIPYGTIVTKLCRASGVRWPANEQLQLPAAPIDHSAISRMTEWDGGVPHPRGL 296

Query: 409 GFTF---PDTQPQDATMDDAPGSSSAGTSRGFGRYFQRMEQQMVRIAKRQEVVH 257
           G+ +   P  +P      +   +S AGTS+         +    R+A+R + +H
Sbjct: 297 GYIYDEMPGGRP-GFIRRERTRASGAGTSQTERSSEPMGDVHYRRLARRMDTMH 349


Top