BLASTX nr result

ID: Acanthopanax21_contig00027106 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Acanthopanax21_contig00027106
         (490 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZN04203.1| hypothetical protein DCAR_005040 [Daucus carota s...    56   1e-06
ref|XP_017231695.1| PREDICTED: uncharacterized protein LOC108206...    56   3e-06

>gb|KZN04203.1| hypothetical protein DCAR_005040 [Daucus carota subsp. sativus]
          Length = 177

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = -2

Query: 225 TGDTELKVKGASENDVGSKITELVNQNNSFNGKAGGSDSDLDAKKANSISKGEDQVGGST 46
           T + ELKV G S    G+  +E+  Q    N K GGS SDLD+K  + +SKG+ QV G  
Sbjct: 19  TNEAELKVNGGS----GTNTSEISVQTKGLNRKVGGSVSDLDSKNVDLLSKGKKQVKG-- 72

Query: 45  EGIQKSSLEK 16
           +G++KS LEK
Sbjct: 73  DGVEKSGLEK 82


>ref|XP_017231695.1| PREDICTED: uncharacterized protein LOC108206039 [Daucus carota
           subsp. sativus]
 ref|XP_017231696.1| PREDICTED: uncharacterized protein LOC108206039 [Daucus carota
           subsp. sativus]
 ref|XP_017231697.1| PREDICTED: uncharacterized protein LOC108206039 [Daucus carota
           subsp. sativus]
          Length = 365

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/70 (45%), Positives = 43/70 (61%)
 Frame = -2

Query: 225 TGDTELKVKGASENDVGSKITELVNQNNSFNGKAGGSDSDLDAKKANSISKGEDQVGGST 46
           T + ELKV G S    G+  +E+  Q    N K GGS SDLD+K  + +SKG+ QV G  
Sbjct: 19  TNEAELKVNGGS----GTNTSEISVQTKGLNRKVGGSVSDLDSKNVDLLSKGKKQVKG-- 72

Query: 45  EGIQKSSLEK 16
           +G++KS LEK
Sbjct: 73  DGVEKSGLEK 82


Top